Cspo042321.1
Basic Information
- Insect
- Catocala sponsa
- Gene Symbol
- -
- Assembly
- GCA_963564715.1
- Location
- OY751356.1:12126626-12128977[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0044 5.7 8.4 0.9 18 43 9 31 5 32 0.93 2 19 0.00073 0.94 10.9 0.0 18 43 68 90 65 91 0.94 3 19 0.003 3.8 9.0 1.1 17 43 98 121 96 122 0.90 4 19 0.00052 0.67 11.4 1.4 18 43 129 151 128 152 0.94 5 19 6.6e-06 0.0085 17.4 1.1 14 43 156 182 153 183 0.90 6 19 0.00021 0.26 12.7 0.5 17 44 188 212 184 212 0.89 7 19 0.00089 1.1 10.6 0.2 16 44 218 243 213 243 0.89 8 19 0.095 1.2e+02 4.1 0.2 13 44 251 279 245 279 0.83 9 19 0.72 9.2e+02 1.3 2.5 3 43 292 327 285 328 0.80 10 19 6.2 8e+03 -1.7 0.2 18 29 335 346 332 352 0.76 11 19 0.87 1.1e+03 1.1 0.0 15 27 361 373 357 387 0.80 12 19 2.6 3.4e+03 -0.5 5.5 18 43 409 431 400 432 0.88 13 19 0.94 1.2e+03 0.9 4.0 16 29 436 449 432 461 0.72 14 19 0.0021 2.7 9.5 3.3 6 43 455 489 452 490 0.83 15 19 0.098 1.3e+02 4.1 0.8 17 44 495 519 491 519 0.85 16 19 3.9 5e+03 -1.0 0.9 19 43 557 578 553 579 0.73 17 19 0.00012 0.15 13.5 2.5 5 44 607 645 604 645 0.82 18 19 7.9 1e+04 -2.0 3.3 15 40 662 689 653 700 0.80 19 19 2.2 2.8e+03 -0.2 0.7 12 27 689 704 682 706 0.76
Sequence Information
- Coding Sequence
- atgtatcacAACCAACTGGATTTCGTATGCGATTACTGCTCAAGAACAtttacaagaaaatataatctGCAGACGCATATCGAAAACTGCCACATAAACTCTTCTAGCCATTGTGATATTTGTAGTCAGAGTTTTGGTAGTCCTGCGGGCTTGCAGCTCCATCTCACCAGAGGTCACAACAACTATGGACAACCATTCCCTGAGTGTGATTTGTGCGGACGAATCTTTACCAGAAAGCAAAACATCATGTCACATATGATAACCGTTCATCTACAAGGACTAGGTGATGAAATAAGATGTAGATTATGCGATAAAACATTTACTACTGAACGCAATTTAAAGAGGCATAGGAATCAACAGCATAATCCTAATGTAGAATATCCGACTTGCCACTACTGCAGTAAGGTTTTTAAAGGCAAACACTCTCTTATAGCTCACATACAAACTGTTCACACGTCGAGCGAGAAAGATGTTATAAAATGCCATTTATGCGAGAAAGTCTATACGAACACAAGGAATTTAAAACGTCACGTAGAAATGTTCCATGGCGAGAGAGGTGAATATCGTTGTGATATCTGCCCTAAAGTATATACATCTAATCAGAGTTTGAGGCGACATCTACGTACAACGCATAGTACAGACAGCCATGAGCAGTTTACCTGtagttattgtaataaagttatCATTGGTAAAGAAAATTTCGAGAGTCACATACAATTCAACCACCAGCAATCAGAAATGGAAGTTAAGATTGAGAATGATATTGTTTGTGAAACGTGCCACCAGAGTTATGATGAAGAAGTGCAGCTACGCCAGCATATTAAGTTACAACATTCATTTAAAGCATTTTACAAATACTGCAAAAAAGTTTTAGTTAAGCAATATGGAACTGAATacatcaataatatatataattgcgAGTATTGTCAGCACGCATTTCCTAGCGTTTATGAGCTGAAAGATCATATGAGAGTCAACCATGACACGGAGTATTCCCTATCTACTTGCAATGTGTGCTTTAACAAGTTTTACAGCAAGGAGACTATGATAGCTCACAAAAAAGTGTGTCTACCCCCACCTAACGTGAATTCCTGCAGTCATTGCGATAAACTCTTCACTGATATATCCAGTTTAGAGTTTCACACGAGAATATTTCATCCACAAGCTCAAATCGCCGACTCAAATATATCTTCGACGAATGTAGACGAAGAAATGTCTTGTTTTAAATGCGAGCATTGCGACCGCATGTATTACAGTGACCGTTCTTTGAAACATCACATCAAGCTAAAACACACATCGGATGAACAGGTACCATGCCACATTTGTGGAAAGATTTGCAGTAACAAGTACTACCTAGCATCTCATATCAAAATTGTTCATAACAACGACACCTGGTCCCGGTGCGAGTATTGCGACAAACAGTTCAAATCTAAGAGGAACATTCGACGCCATATTGAATACACGCATCTAGGAATGCAACGGTATAAGTGTATTGAATGCGAGACGTTGTTCAAAGAAAAACGGAGCTTAAGAAAACATGTTAGGACCAAGCATCCGAACTCGGCAGCGTTTCCACAATGTCACATATGCTACAAGCGTTTTGAGTCCGCCAAATCTTGTAAGATTCATCTTAAGCTTCTTCATTCTTTCAATATGAATACGTATCCGTGTCATCTCTGTTCCGTATCGTTCAGCTCAAACGAAGCGTTGACTATACATTTGAACACGAAACATTTGGCCGAAGATGAAATATACAAATGCGAGGAATGCAATGTTGTTTTCAAAGGACAAGAGCGTTTCGACAGTCACAATGAACTTTGTCATGTCAATCTAGTGCCCAATATAAAACAGAAGGTACTGCCCCGATGTATTCTCTGCATGAAAGATTTCAGCACCAGAAAGACTTTAAAACGCCACATCAAAAAATTCCACAATGATTTTGACGTTGATGAACTGGCTACATTCGGTTCTCGAAGAAGAACATTTACAGTTGATTGCGAGGAATGTGTTAAGAACTTTAATGACGAATTTCATCATAATGTTTATCAGAAGATAAAACACTTACGAGATTCGATTATATTCAAGTGTGAGATGTGTCATTCTTCTTATAATTCTTTGGAGTACGCTATTCAGAGGTACAAGCTGGCGAATGGAGAAGCTTGTAAGACCAAAACGATTCTAAGCGAGCTATGTACTACTGAGATGAGTGAGGAGGAAACTGAATTTTCTGGCTTCGGCTCCTTACATGAGTTGCCAGAGAGTACGACTAACGATATACAAATTAAGATGGAGCCGCTAGACCAGCTGATGGAATATGACGAAGATATCAAATCAGAACCTGTATCTCCTTGA
- Protein Sequence
- MYHNQLDFVCDYCSRTFTRKYNLQTHIENCHINSSSHCDICSQSFGSPAGLQLHLTRGHNNYGQPFPECDLCGRIFTRKQNIMSHMITVHLQGLGDEIRCRLCDKTFTTERNLKRHRNQQHNPNVEYPTCHYCSKVFKGKHSLIAHIQTVHTSSEKDVIKCHLCEKVYTNTRNLKRHVEMFHGERGEYRCDICPKVYTSNQSLRRHLRTTHSTDSHEQFTCSYCNKVIIGKENFESHIQFNHQQSEMEVKIENDIVCETCHQSYDEEVQLRQHIKLQHSFKAFYKYCKKVLVKQYGTEYINNIYNCEYCQHAFPSVYELKDHMRVNHDTEYSLSTCNVCFNKFYSKETMIAHKKVCLPPPNVNSCSHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNVDEEMSCFKCEHCDRMYYSDRSLKHHIKLKHTSDEQVPCHICGKICSNKYYLASHIKIVHNNDTWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICYKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALTIHLNTKHLAEDEIYKCEECNVVFKGQERFDSHNELCHVNLVPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHNDFDVDELATFGSRRRTFTVDCEECVKNFNDEFHHNVYQKIKHLRDSIIFKCEMCHSSYNSLEYAIQRYKLANGEACKTKTILSELCTTEMSEEETEFSGFGSLHELPESTTNDIQIKMEPLDQLMEYDEDIKSEPVSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00677880;
- 90% Identity
- iTF_00677880;
- 80% Identity
- iTF_00282638;