Cspo002798.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Catocala sponsa
Gene Symbol
PAXBP1
Assembly
GCA_963564715.1
Location
OY751327.1:6382616-6395402[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-16 3.7e-12 47.8 0.0 4 190 479 644 476 653 0.76

Sequence Information

Coding Sequence
ATGAGGCGAGGCGTCTTGAAGCACAGCGGTACATTTGAAGTTATGAAGGAAGAAGTGGAAGTGTTCAAGGTAAAAAAGTCTTCTCAAAGCAAAAGACTGGCGAAAAGACGAGAGAAGGAGAAAGAGAAAGAGAAGCAGAAACGTGACGTGAGAACTGATGGTGATAGTAACAAATATGACAGTAATGGATATGAGGAAAAGAACAACCACATAGAGAGCCCCACTGATCGGAAACCAAAGAAGAAGGTTACCTTGGAAGGTCTGATACTTTCTGGTCGTGAGGCGCTTGCGGCTGATGGCGAGGGCGACGTGACCAGTGGGGGGGAGGAGGAGGAGGAGGAAGACTCGAGAGGGTTCCACCAGTACCGCGCGGAGTCGGTGCGGGCCGCGCTGGCGAAGCCGGGGATACCAGATGCGGCGCTCATCCATGCAGCCCGCAAGACCAGACAGCAGGCCCGCGAACTCGGTGGTGATTTTATCCCGGTAAAGTCGGAAAACGCTCCAGGCTCTAGGCTGGTGCGGGATGATGGTTCCGGCGACGATGATGAGGAGGAGGGCAGGATCCTTGTCAGGGGTTTGGACATGCCTGATGATAAGCCTAAACGTGGCACAGCGGCTGTTTCAGAGGAGGAGCTGGATAGCGAGACGGAAGAGTGGGCATCGCAGCAGCTGCAGAAAGCGCGGCCCGCCATTATCGACATCACTGGTGAAGGTGCTATAGAAGTAAACCCATTCTCGGTGCCGTTGCCAGCAGCTCATGTAGAAGCTCCTGTGCATTTAAGGCCGCTCACTACAGACAATACCACTGCGCCCACTTCGGCTAGTGAACTCGTAGATGCATTGAAGAAACgACTGGGCGAGCTGCGCACGGAGCGATGCTCGCACGCGCAGACGCAGGTGCAGCTGCGCTCGCGCCTGCTGGTAGCCGCGCGCGTGCGCGAGAGTCGCGCCGCGCGCTGCGCCGAGCTCGACGCCGCCTACCGCCGCGCGCAGGCTATCCGCGGGTATCTCACCGACCTGATCGAGTGCTTGGACGAGAAGATGCCACAGCTAGAATCATTAGAGGCTCGTGCTTTAGCATTGCACAAACGTCGTTGCGAGTTTCTCGTGGAACGGCGGAGAGCAGATCTCAGGGACCAGGCGCAAGACGTACTCGCTCTAGCTGCACGAGCGGGGTGCGCTAAGCCAGTAGATTGTGAGGAGAAGACTCGGCGCGCCGCCGAGCGCGaggggcggcggcgcgcgcggcgccTGCGCCGGGAGGCagctgccgccgccgccggcgctgCGCCCGCGCACCGCGACGGGGACTCGTCCGACGACGAGCTGCCGCCGCATGAGCTGCACCACTACAACCAGGAGAGAGATGCGATCCGCGAGCAGTCGTCCCGTTTGTTCAGCGATGCCCTTCCTGCGTGGCGCAGCGTGGCCGGCGTGTGCGCGCGGCTGGCCCGCTGGCGTGCGCGCGCGCTCACTCTGTATACAGACGCGTACGTGGCCGACTGCCTGCCTAAGCTCCTGGCGCCATACGTCAGACATCAGCTAATACTATGGAACCCACTGGCAGATGAGGACAACGAAGATTACGAAAAAATGGATTGGTACAAATGTCTTTTAATGTACGGCGTTCGGTCAGAACGAATGGGCGATTCGTCAGACTCGGGATCTGAGAGTGAATCTGAGTCGAAGCCAGTCACAGAGCGATCTGTGAGGGAAGACCCGGACCTGTTGCTCGTACCTACTATCTTGAGTAAGGTGGTGCTCCCGAAACTAACAGAGTTGGTGGAGGCGGCGTGGGACCCGATGTGCGTGCGCGCGTGCGTGCGCCTGCGCCACTATGTGTCGCGCAGCGCGCTGGCGCCGGTGTGCGGCACGGCGCTGCGGCGCCTGGCCGCAGCCGCGCGCGCGCGCCTCGCCGCCGCGCTCGCCGCCGACGTGTTCCTGCCCGCGCTGCCGCCGCAGATAATGGAGGGCCCAGGCGGCTTATTCTGGCGGCGCTGCGTGGGCGCGGGCGTGCGTCTACTGCGCGCGTCGCTGGCGCTTACCTCGCCGCCGCCGCTGCTGCGCGCAGACCCGCTCGTGCTCAAGCTCATCGATACGCTGTGCATGGGCGCGGGCGCTGCGCCGGGCCCGTACGTggcgcgcgcggcggcggcgctggCGGCCACACTGCCGCGCCACGGCGCTCTGCGCGCCACCGCGCTGCAGCGCCTCGCCGCGCTCGCCACGCTAGCACTACAGCGACTCGACAACGACAACCCGCTGCACTTAAAAGCATTGGAGCAAGCGAGGGACGTCATCGCAGAGGCAAAAGCGGTAGAATGA
Protein Sequence
MRRGVLKHSGTFEVMKEEVEVFKVKKSSQSKRLAKRREKEKEKEKQKRDVRTDGDSNKYDSNGYEEKNNHIESPTDRKPKKKVTLEGLILSGREALAADGEGDVTSGGEEEEEEDSRGFHQYRAESVRAALAKPGIPDAALIHAARKTRQQARELGGDFIPVKSENAPGSRLVRDDGSGDDDEEEGRILVRGLDMPDDKPKRGTAAVSEEELDSETEEWASQQLQKARPAIIDITGEGAIEVNPFSVPLPAAHVEAPVHLRPLTTDNTTAPTSASELVDALKKRLGELRTERCSHAQTQVQLRSRLLVAARVRESRAARCAELDAAYRRAQAIRGYLTDLIECLDEKMPQLESLEARALALHKRRCEFLVERRRADLRDQAQDVLALAARAGCAKPVDCEEKTRRAAEREGRRRARRLRREAAAAAAGAAPAHRDGDSSDDELPPHELHHYNQERDAIREQSSRLFSDALPAWRSVAGVCARLARWRARALTLYTDAYVADCLPKLLAPYVRHQLILWNPLADEDNEDYEKMDWYKCLLMYGVRSERMGDSSDSGSESESESKPVTERSVREDPDLLLVPTILSKVVLPKLTELVEAAWDPMCVRACVRLRHYVSRSALAPVCGTALRRLAAAARARLAAALAADVFLPALPPQIMEGPGGLFWRRCVGAGVRLLRASLALTSPPPLLRADPLVLKLIDTLCMGAGAAPGPYVARAAAALAATLPRHGALRATALQRLAALATLALQRLDNDNPLHLKALEQARDVIAEAKAVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00823913; iTF_01360634; iTF_00404940; iTF_00637669; iTF_00908864; iTF_01197742; iTF_01152176; iTF_00823057; iTF_01166712; iTF_01502106; iTF_00931424; iTF_00932569; iTF_00709256;
90% Identity
-
80% Identity
-