Basic Information

Gene Symbol
-
Assembly
GCA_963675205.1
Location
OY776106.1:968050-985393[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.7e-15 5.7e-11 44.4 0.0 3 89 221 294 219 294 0.90

Sequence Information

Coding Sequence
ATGATTACCTCATCGGACGAAGTCCTAGCCATCAACGATAAGGTGGTTCTCCGCGCAGACGACCTGCTGAGCTGGATCTGTACTGGCACCGAGTGGCGCTGGGGGCTGCGGGCCGTGTGGCGAGGAGCCTGCGCCCCTCCGGCCGACCCGCGGCACACCTCGCCGCTACATCATACCAAGCTCGACTTCAGCGATGTGGATAACGAGAAGAATACTATTGCGATAGACGCCGATGCACCAGGCGTCGTGGTCTTCTCGTACCCTCGGTACTGTCGCTACCGGGCGCTGCTGTCCCGCCTAGAGGGTATCCAGGCTGACTGGCTAAGAGACTCCCTTGTCGCGGCGCTGGGAGGGTATGCGGCTCCCACCAACAATACTAGGATACTATATTGTAAGGATACGTTCGAATACCCAGAGCTGGAAGGTCATGAGTTCGTGTGCAACCACCTGGCCCCTCGGCTTAAGGGGAGGCCTCGCGGACGCAGGAGACGCGCCCCCCACTCCCCCTCCCCTGACAGGACCGACAGATCAGCCACCGAGTCGCCGCCGGCGCTCTCACCGCCGACGCCGCGCCGACTCTCCCTCCGAAACGGCGGGCCAGACAAGCAAAGCGAAGACGAGGAAGAAGACTGCAAGAGAGTAGAAGAAAGCACAGAAGACCGCGCATTCCTACAGTCGCTGAAACAGTTCTACAAAGATAGGAGTGAACCGTTCAAAAGCGGACACACGCTGAAAGACCTGTCCCTCCGAGCGCTGTACGTGTCGGTGGTGTCCCGTGGGGGGTACGAGGCGGTGTGCAGACACAAGCTATGGCGCGCGCTCGCACACGACCAGCCGGCCAGGACCCGCAGACACTATGAGAGATTCCTCCTACCATACGAGAACCACGAACGCCGCAACGGCGCAGCATCCCTTTTCAAAATAAACGGCAAACTGGACATCGAACCGCAAACGATCGCAACAATAGACGTAACAGACTCCCCACTACGCGACGACGAACATTCAGACAAAATACTACGCACACCATCACCTAAACTCGAAAAATACAACTCAGAAAACGAAATTTCCAAAGACGAACTCATTACGACTAAAAACGCTGAAGAACTCAACAGAGAATTCCTAGATTCCTTACCGAAAGAAGAGAAACCGGTGAAGATTTCGGTGAAACCGGTGGAGAAATTGATTCAGCCGCATGTGGTGAAACTTTTTGAGGAGAATAGCGTGGTGGACGCGACGAAATGCGGCTTGGAACTGACTAAGATGGAGGATGTTAAGGATATGACGCAGAGTAATCTGTTCCTGAGTGATATCAATAAGATTAATATGGCAGATCCTCTGAGTCGCGGCGCACCTGCGCCACTCAACGGTCACGCGCCGCCTGCCATCGACCTGAAGGCGTCCCGCCCGGCGGGCCGCAGTTCCCTGCGCGCCGTGCGCGTGAAGCCGGCGCGCCCGCTGCAGCACGCCGCCGCCACTACTCCTCCTAACCCTCTCCGGCCAGACTCAGCGTCGTCCTCCCCTCCACTGTCCAGCTCGCTGCCCTCCAACGTGGGGATGAGTAGCAACCCCCCCGTATCACTCAGCAGTAATCCCCCCGTCACCAATTTCGGGATACACCACCCCCCACCACCTCAACATCACAGCGATGACGATATTGTAGAGGTTCCTTATAAACCGAAGACCCCAGAGATAATTGACCTCGACGAATACCCGGAAAGCCCTCAAGCCGTCAAGAAAAAGAAGCTGGACATCCTCAAGGAACGAGGCCTGGAAGTCACTGCCCTACCCCCATGGAACCCCATGCCCCCTATGATTAACCCCCCCATGATCTTAAATCCAGCCATGCAACACCAGATCATGACCCAAGCACAGCTATTCCAAATGTATAACATCATACCCCCGAATTATGCCAACGGGATTCAACCCCCAAAGGTTATTCAAGGGTCCTCAATCTTCGGCAATATGGGACCAGAGAAGACCGTCTATGGAAACCCAAAAGACCCTTTCATGCCTCCGCCACACATACTTCACGGGGCACCAGTCAAACCTCTAAGAAATATCCCCACCACAAATCCGACTCCCCAGGACATCCTAGACTTGACTTGCAAATCAGCCAGTCCACCTCCTCAGAAACCAGCAGTGGAAATCTTAAGAGTATCCTGCCCCTCGCCGAAGTCTACCGCACAGAATTTATCCAAAAACTACACTTTACTAGATGGCAAGGCTGTAGTGGGATCCAATTTAGAAATAACTTTAGTCAACAAAGCTCACAGCCCCACCAAAACTGGTCCTAGACCCCCACAAAAGAGGTCTTCTAACGGCAAGTTCATGTCTACAAAGACCCCTACACCCCCCAAAGACTACAAGTTCCCAAGTTCCCAACCTTCAAATATGCAGAAGAAACCAGCGATCACGATCCCGAATTACCAGATTAGGGAATCATCGTCTCCTACAGGATCTTCTCAAAAGCAGGCCCCGTTCAAAGGTCCAAGTGCACCCGTAGCACAAATTATGGACCTTCAGAAAGGGTCTGGTCCCATGTCGTCGTTCATAGACCCTTACACCGTGGCGCTGTACAGCAGTCTAGCCGGTCAGATGGACCAGAGACAATTGGCTATGTATAGAGATTTAATGGCTAACCAATTCAGAGGTTACCCTGGTCTGTTAAATTTAGGAGTATCAAACACACCTACAACGAAAAATTAG
Protein Sequence
MITSSDEVLAINDKVVLRADDLLSWICTGTEWRWGLRAVWRGACAPPADPRHTSPLHHTKLDFSDVDNEKNTIAIDADAPGVVVFSYPRYCRYRALLSRLEGIQADWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAPHSPSPDRTDRSATESPPALSPPTPRRLSLRNGGPDKQSEDEEEDCKRVEESTEDRAFLQSLKQFYKDRSEPFKSGHTLKDLSLRALYVSVVSRGGYEAVCRHKLWRALAHDQPARTRRHYERFLLPYENHERRNGAASLFKINGKLDIEPQTIATIDVTDSPLRDDEHSDKILRTPSPKLEKYNSENEISKDELITTKNAEELNREFLDSLPKEEKPVKISVKPVEKLIQPHVVKLFEENSVVDATKCGLELTKMEDVKDMTQSNLFLSDINKINMADPLSRGAPAPLNGHAPPAIDLKASRPAGRSSLRAVRVKPARPLQHAAATTPPNPLRPDSASSSPPLSSSLPSNVGMSSNPPVSLSSNPPVTNFGIHHPPPPQHHSDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPWNPMPPMINPPMILNPAMQHQIMTQAQLFQMYNIIPPNYANGIQPPKVIQGSSIFGNMGPEKTVYGNPKDPFMPPPHILHGAPVKPLRNIPTTNPTPQDILDLTCKSASPPPQKPAVEILRVSCPSPKSTAQNLSKNYTLLDGKAVVGSNLEITLVNKAHSPTKTGPRPPQKRSSNGKFMSTKTPTPPKDYKFPSSQPSNMQKKPAITIPNYQIRESSSPTGSSQKQAPFKGPSAPVAQIMDLQKGSGPMSSFIDPYTVALYSSLAGQMDQRQLAMYRDLMANQFRGYPGLLNLGVSNTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2