Basic Information

Gene Symbol
-
Assembly
GCA_905163515.1
Location
LR991104.1:10550362-10573231[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-15 1.2e-11 46.0 0.1 4 89 217 289 214 289 0.89

Sequence Information

Coding Sequence
ATGCACGAGGTGCTCGCAATCAACGATAAGGTAGTAGTCCGCGCTGACGACCTACTCAGCTGGGTGTGTACGGGAACCGAGTGGCGATGGGGCTTACGTGCTGTATGGCGTGGAGCCTGCGCGCCTCCCGCCGAACCACAATCAACATCACCCTTACATCACACCAAGCTTGACTTCAGCGATATCGATACTGAGAAGAATGCCATGGCTGTAGACGTGGATGCTCCGGGTGTGGTTGTATTCTCATACCCACGGTACTGCCGATATCGCGCTCTGTTGTCCAGGCTTGATGGTATCCAGGCGGATTGGCTTAGGGACTCCCTGGTGGCGGCTTTGGGTGGATACGCTGCACCCACCAATAACACTAGAATCCTATATTGTAAGGATACGTTCGAATATCCAGAGCTGGAAGGTCATGAATTCGTTTGTAACCATCTCGCTCCAAGACTGAAAGGGAGGCCTCGAGGTAGAAGGCGGCGAGCTGCACACTCACCATCACCAGACCGCACGGATAGATCAGCGACGGAATCACCAGTCGCGTCACCACCAACGCCGAGGCGGATCTCCCTCCGTAACGGCGCACCTGATAAGCAGAGCGAAGACGAAGAGGAGGAATGCAAGAGAGTAGAGGAGACGGCAGAAGACCGCGTCTTCTTGCAACAGTTGAAGCAGTTCTACAAGCACAGAGGCGAACCATTCAAAAGTGGTCATACGCTTAAAGATtTGTCGCTTCGAACTTTATACACTTCAGTGCTATCCCGGGGCGGTTACGAGAATGTCTGCCGGCATAAGCTGTGGCGTACTCTAGGACATGAACAACCCGCCAGGACTCGAAGACATTACGAACGATTTCTTCTACCATATGAGAACCATGAACGTTGCAATGGGACATCATTGTTCAGACCGAACGGCAAACTGGATCCTGAACCTCAAACCATCGCCACCATAGACGTGACAGATTCCCCACTCCGTGAAGACGAGCTCCCAGAAAAGATACTTAGAACACCCTCCCCAAAAATAGAGAAAGAGAAAGAAGAATTAATTGTAGAGAAAAATGCTGAGGAGTTGAATAGGGAATTCTTGGAATCATTACCAAAAGAAGAGAAGACTGGCAAGATCTCTGTTAAACCTGTTGAAAAATTGATAGAGCCGAGTGCTGTGAAGCCTTTTGAGGATGTGGAAAGGAAAGAAGTCAATAAAGTTGAGGACGTAAAGGATATGACTAAGAGTCATCTGTTTTTAACGGACTACGGACAAATTGGAATGGtTGCACCTACATCACTCAACGGACATGTGCCGCCACCTGTCGGGGATCTGAAGACAGCAAGACCTGTGGGTCGCAGTTCCCTTCGAGCGGTGCGAGTGAAGCCCACGAGACCCATGCAACATGTCAGTTCAACCACACCTCCAAACCCTCTCCGGCCAGACTCTGCGTCATCGTCTCCACCGCTGACAGCCTCGAGTTCACTCTCCTCAACTCCATCAGTTTGCCCGCCGGTGATGATGAACATCATGCCCCCTATCACCAACTTCGGAATACATCACCCGCCCCCGCCACAACAACATAGCGATGATGATATAGTTGAGGTACCATACAAGCCTAAGACCCCAGAAATAATTGACTTAGACGAATACCCAGAGAGCCCTCAAGCgatcaagaaaaagaaattggATATCCTCAAAGAGCGAGGACTCGAAGTCACACCTCTACCAACTACATGGAACCCAATACCACCCATAATAAACCCCCCAATGATGTTAAATCCCATCATGCAGCACCAAATAATGACTCAAGCACAAATATtccaaatgtataatattatacccCCAAATTATACCAACGGTTTACAACCGCCAAAAGTGGTACAAGGTTCCTCAATATTTGGAACCGCTGGACCCGAAAAGACGGTCTATGGTAATCCAAAAGACCCATTTATGCCACCACCACATGTCCTTCACGGGGTACCAGTCAAACCGCAAAGAAATATACCCTTAACAAATACAACTCCTCAGGATATTCTAGATTTGACATGTAAGTCTTTAAGTCCATCACCTCAAAAACCAGCTGTGGAAATTCTAAGAGTCTCCTGCCCTTCACCAAAATCTACAGCACAAAATTTGACTAAGAATTACACTTTAATAGACGGTAAAGCAGTGGTAGGTTCTAATTTAGAAATAACTTTAGTCAACAAACCACATAGTCCAAACAAAACAGGCCCCAGACCACCACAAAAGAGGTCTTCAAATGGCAAATTTGTGTCTACCAAAACCCCAACTCCCCCTAAAGACTTCACCAAATTCTCCAACCCTACCCATAGTAGTTCAAATCAACCCCAAAAGAAACCCACAATAAGTATTCCAAATTACCAAATAAGAGAAGAAAGTCCCTCTACAGGATCTCAGAAGCAAGTGCCGTTCAAACCCCAAACGCCGTTAGCGCAGATTATGGATTTGCAAAAAGGTTCCACGCCACCTATGTCCTCATTTATGGACCCTTACACGGTGGCTCTTTACAGCAGCCTAGCTGGCCAGATGGATCAGCGACAATTGGCTATGTATAGAGATTTTATGGCGAATCAATTAAGAGGATACCCCGGTCTCCTAAATTTAGGGGTCTCAAATACGCCTACAACGAAAAATTAG
Protein Sequence
MHEVLAINDKVVVRADDLLSWVCTGTEWRWGLRAVWRGACAPPAEPQSTSPLHHTKLDFSDIDTEKNAMAVDVDAPGVVVFSYPRYCRYRALLSRLDGIQADWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAAHSPSPDRTDRSATESPVASPPTPRRISLRNGAPDKQSEDEEEECKRVEETAEDRVFLQQLKQFYKHRGEPFKSGHTLKDLSLRTLYTSVLSRGGYENVCRHKLWRTLGHEQPARTRRHYERFLLPYENHERCNGTSLFRPNGKLDPEPQTIATIDVTDSPLREDELPEKILRTPSPKIEKEKEELIVEKNAEELNREFLESLPKEEKTGKISVKPVEKLIEPSAVKPFEDVERKEVNKVEDVKDMTKSHLFLTDYGQIGMVAPTSLNGHVPPPVGDLKTARPVGRSSLRAVRVKPTRPMQHVSSTTPPNPLRPDSASSSPPLTASSSLSSTPSVCPPVMMNIMPPITNFGIHHPPPPQQHSDDDIVEVPYKPKTPEIIDLDEYPESPQAIKKKKLDILKERGLEVTPLPTTWNPIPPIINPPMMLNPIMQHQIMTQAQIFQMYNIIPPNYTNGLQPPKVVQGSSIFGTAGPEKTVYGNPKDPFMPPPHVLHGVPVKPQRNIPLTNTTPQDILDLTCKSLSPSPQKPAVEILRVSCPSPKSTAQNLTKNYTLIDGKAVVGSNLEITLVNKPHSPNKTGPRPPQKRSSNGKFVSTKTPTPPKDFTKFSNPTHSSSNQPQKKPTISIPNYQIREESPSTGSQKQVPFKPQTPLAQIMDLQKGSTPPMSSFMDPYTVALYSSLAGQMDQRQLAMYRDFMANQLRGYPGLLNLGVSNTPTTKN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00280916;
90% Identity
-
80% Identity
-