Lqua020129.1
Basic Information
- Insect
- Lithosia quadra
- Gene Symbol
- Arid5b_1
- Assembly
- GCA_963576445.1
- Location
- OY754897.1:7944345-7962362[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6 1.5e+04 -3.1 0.0 39 52 129 142 128 155 0.79 2 2 9.1e-15 2.3e-11 44.4 0.2 3 89 237 310 235 310 0.89
Sequence Information
- Coding Sequence
- ATGACAGTTTTTATTAACGTGGTACCACCTACAGGGGGAAGGTTGAGGGAAAATAAAGCAAGGAAAGACGAAGTCTTAGCCATCAGCGACAAGGTTGTCCTCCGCGCAGACGACCTCCTCAGCTGGATCTGCACCGGCGAGGAGTGGCACTGGGGGCTCCGCGCCGTGTGGCGGGGGGCCTGCGCGCCTCCCGCAGACCCTCAGCACTCCTCGCCCTTACACCACACAAAGCTGGATTTCAGCGATGTGGACACTGAGAAGAACGCTATAGCGGTAGACACCGAGGCTCCTGGCGTGGTGGTGTTCTCGTACCCTCGGTACTGCCGTTACCGGGCGCTCCTGTCGCGACTGGAGGGCATCCAGGCGGACTGGCTCCGGGACTCGCTGGTGGCTGCTCTGGGGGGCTATGCTGCTGCCACCAACAACACTAGGATACTATATTGTAAGGAAACCTTTGAGTACCCGGAGCTAGAAGGGCATGAGTTCGTATGCAACCACCTTGCCCCCCGGCTGAAGGGTAGGCCCCGGGGACGAAGGAAACGCGCCCCACACTCACCCTCGCCGGATAGGACAGACCGCTCCGCCACGGAGTCACCCCCGACGCTCTCACCTACTCCCCGCCGCCTCTCCTTACGGAATGGCGGCCCCGAGAAGCAGAGCGAAGACGAAGAAGACGACTGCAAGAGACCAGAGGAGACCGCAGAAGACCGCGCGTTCCTGCAGCAGTTGAAGCAGTTCTATAAACATAGGAATGAGAGCTTTAAGAGTGCGCATACGCTCAAGCACCTGTCGCTGCGCGCGCTGTACTTGGCGGTGGTGTCGCGCGGTGGGTACGAGGCGGTGTGCCGCCACAAGCTGTGGCGCGCGCTGGCCGTCGACCAGCCCGCGCGCACGCGCAGGCACTACGAGAGATTCCTTCTACCTTACGAAAATTACGAGCGGCGCACGGGCATGTTATCAGTCTTCAAATTAAATGGCAAAGTCGACATCGAACCGCAAACCATCGCCACGATAGACGTCACCGACTCCCCCCTCCGGGAGGACGACCTCGCAGACAAGATCCTCCGCACTCCCTCGCCCAAACTCGAGAAATATCACTCAGATAATGAAATTTCGAAAGATGAAACCGTTCCGAAAAACGCGGAAGAATTGAATAGAGAATTTTTAGATTCGTTACCGaaagaagaaaataaagttaaaatatctGTGAAACCGGTGGAGAAACTGATTGAACCTGTTAAATTGTTTGAGGAGAATATGGCCATGGACTTGAAATGTGGAGGGGGGGAGAGGGCCAAGAGTGAGGATGTTGCCGACAGCAGTCAGAGGAACGTCAGCGATCTGTACCAGCTGCCCATGTTAGTGGAGCCTACCCGCCTGCCCCCGCCACTCAACGGGCACGCGACCGCGCCTGCCGGGGATCTGAAATCAGCGCGGCCGGTGGGACGCAGCTCGCTTCGTGCTGTACGCGTCAAGCCTAGCCTGGGTCGGCCAACCGCACACACTCCCAACCCGCTGAGGCCGGACTCTGCGTCGTCGTCCCCCCCTCTGTCGGCGCCCCCCTCGCTGTGCTCCACCCCCTCGTGCCCGCCCCCGCCCTCTAGCTCGGCGCCTGTCACCAACTTTGGCATCCACCACCCGCCGCCCCCCCAGCATCACAGCGATGATGACATCGTCGAGGTACCCTATAAACCAAAAACGCCAGAAATTATCGACTTAGACGAATACCCTGAGAGTCCTCAAGGAGTCAAGAAGAAAAAGCTGGACATCCTAAAGGAACGAGGTCTTGAAGTCACAGCCCTTCCCCCTTGGAACCCTATGCCTCCCATGATGAACACTCCAATGATCCTTAACCCAGCCATGCAGCACCAGATCATGACTCAAGCACAAATATTCCAAATGTACAACATTATACCACCAAATTATGCCAATGGCTTACAACCCCCTAAAGTTTTCCAAGGTTCTTCTATCTATGGAACTGTGGGACCAGAAAAAACTGTCTATGGGAATCCAAAAGACCCTTTCATGCCTCCCCCCCATATCCTACATGGGGCTCCAGTCAAACCCTTGAGGAATATACCCCTAACTAATGCTACGCCTCAAGACATTCTCGACTTGACTTGCAAGTCTGCTAGCCCACCTCTCGTCCAGAAACCAGCTGTAGAAATCCTGAGGGTATCCTGCCCATCTCCGAAGCTCTCGGCTCAAAACCTATCCAAAAACTACACTCTAGTAGATGGCAAAGCCGTCGTGGGATCCAACCAATTAGAAATTACTTTAGTCAACAAGGCCCACAGTCCTAACAAATCAGGACTCCGCCCCCCTCAAAAGAGATCTTCAAACGGGAAATTCATGTCGACAAAAACGCCTACTCCCCCCAAAGACCACCTGAAATTCCCCAGCCCATCCCAGCCTGCGAGCATCCAAAAAAAACCCGCGATTAATATTCCTAATTACCAAATCCGCGAGGATTCTTCCCCTACCGCGTCCTCCCAAAAACCTACTCACCCTCTCCcgtataaaaatcaaaacataccCCTAGCACAAATAATGGAGTTACAGAAGGGTACAGGCCCTATGACGTCATTCATCGACCCTTACACAGTAGCCCTATACAGCAGTTTAGCTGGACAGATGGACCAGCGACAACTGGCGATGTATAGGGACTTAATGGCGAACCAAATAAGGGGTTACCCTGGTCTCCTGAACCTGGGGGTCTCGAATACGCCTACAACGAAAAATTAG
- Protein Sequence
- MTVFINVVPPTGGRLRENKARKDEVLAISDKVVLRADDLLSWICTGEEWHWGLRAVWRGACAPPADPQHSSPLHHTKLDFSDVDTEKNAIAVDTEAPGVVVFSYPRYCRYRALLSRLEGIQADWLRDSLVAALGGYAAATNNTRILYCKETFEYPELEGHEFVCNHLAPRLKGRPRGRRKRAPHSPSPDRTDRSATESPPTLSPTPRRLSLRNGGPEKQSEDEEDDCKRPEETAEDRAFLQQLKQFYKHRNESFKSAHTLKHLSLRALYLAVVSRGGYEAVCRHKLWRALAVDQPARTRRHYERFLLPYENYERRTGMLSVFKLNGKVDIEPQTIATIDVTDSPLREDDLADKILRTPSPKLEKYHSDNEISKDETVPKNAEELNREFLDSLPKEENKVKISVKPVEKLIEPVKLFEENMAMDLKCGGGERAKSEDVADSSQRNVSDLYQLPMLVEPTRLPPPLNGHATAPAGDLKSARPVGRSSLRAVRVKPSLGRPTAHTPNPLRPDSASSSPPLSAPPSLCSTPSCPPPPSSSAPVTNFGIHHPPPPQHHSDDDIVEVPYKPKTPEIIDLDEYPESPQGVKKKKLDILKERGLEVTALPPWNPMPPMMNTPMILNPAMQHQIMTQAQIFQMYNIIPPNYANGLQPPKVFQGSSIYGTVGPEKTVYGNPKDPFMPPPHILHGAPVKPLRNIPLTNATPQDILDLTCKSASPPLVQKPAVEILRVSCPSPKLSAQNLSKNYTLVDGKAVVGSNQLEITLVNKAHSPNKSGLRPPQKRSSNGKFMSTKTPTPPKDHLKFPSPSQPASIQKKPAINIPNYQIREDSSPTASSQKPTHPLPYKNQNIPLAQIMELQKGTGPMTSFIDPYTVALYSSLAGQMDQRQLAMYRDLMANQIRGYPGLLNLGVSNTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00280916;
- 90% Identity
- iTF_00636056;
- 80% Identity
- -