Basic Information

Insect: Cataglyphis niger
Gene Symbol: stc
Assembly: GCA_004329405.1
Location: SJPC01004466.1:9593-15493[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.76 5.3e+04 -3.7 1.1 15 19 486 490 485 490 0.82

2 14 0.067 4.6e+03 -0.4 0.1 4 10 519 525 518 526 0.94

3 14 2.5e-06 0.17 13.8 12.9 3 18 535 550 534 551 0.92

4 14 3.1e-09 0.00021 23.1 17.3 1 18 587 604 587 605 0.97

5 14 3.4e-06 0.23 13.4 10.1 1 19 643 661 643 661 0.92

6 14 0.5 3.4e+04 -3.1 0.7 5 10 690 695 690 695 0.94

7 14 0.0062 4.3e+02 2.9 11.3 4 18 708 722 701 723 0.86

8 14 1 6.9e+04 -4.6 1.6 5 10 752 757 752 757 0.90

9 14 0.0047 3.2e+02 3.3 11.4 1 11 763 773 763 785 0.88

10 14 1.4e-09 9.9e-05 24.1 11.0 1 19 790 808 790 808 0.98

11 14 1 6.9e+04 -4.4 0.8 6 10 837 841 837 841 0.89

12 14 0.88 6e+04 -3.9 7.3 10 19 855 865 853 865 0.78

13 14 5e-07 0.035 16.0 12.1 1 16 901 916 901 927 0.85

14 14 3.8e-06 0.26 13.2 13.6 1 19 933 952 933 952 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.76	5.3e+04	-3.7	1.1	15	19	486	490	485	490	0.82
2	14	0.067	4.6e+03	-0.4	0.1	4	10	519	525	518	526	0.94
3	14	2.5e-06	0.17	13.8	12.9	3	18	535	550	534	551	0.92
4	14	3.1e-09	0.00021	23.1	17.3	1	18	587	604	587	605	0.97
5	14	3.4e-06	0.23	13.4	10.1	1	19	643	661	643	661	0.92
6	14	0.5	3.4e+04	-3.1	0.7	5	10	690	695	690	695	0.94
7	14	0.0062	4.3e+02	2.9	11.3	4	18	708	722	701	723	0.86
8	14	1	6.9e+04	-4.6	1.6	5	10	752	757	752	757	0.90
9	14	0.0047	3.2e+02	3.3	11.4	1	11	763	773	763	785	0.88
10	14	1.4e-09	9.9e-05	24.1	11.0	1	19	790	808	790	808	0.98
11	14	1	6.9e+04	-4.4	0.8	6	10	837	841	837	841	0.89
12	14	0.88	6e+04	-3.9	7.3	10	19	855	865	853	865	0.78
13	14	5e-07	0.035	16.0	12.1	1	16	901	916	901	927	0.85
14	14	3.8e-06	0.26	13.2	13.6	1	19	933	952	933	952	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTTCCCGGAGGATCCGAATTATTGCACATATTCCACTCGAGACACGGAAGACAACTGGACATACTTCAACGAGAACTCATCGTATCTGCGAAACGTCCCCGCGAGGGGCTACTATCCGGGAACAGAAGGTCAACCAGCTTACGAGCAGAATAGACCCGCCAACGCTTTCTATCAGCATCCGTCAAATATGGTGCCTTTAGAAAATACTTATCAGGGACACATACTGCCAAGCTCATCGTCCGTTGCAAGCGGCTGGCAAACGTCAAACAATCCGCGTTCCGTCAACGGCATCGCCTCGGCTTCGCGTAACGCGCCCTTCCGCGACAATCACAAGCCGAGATCCAAGGGTAACAGAACGATCGATAAGCCTACTTCGTCGGAAGGGGATATCATCCAGTCCAGCATAGTGCAAAACTCAAATTTACACGCTACAGCCAATGAATTCGTGCCAAACAGTGTTAGATTAAATAAGgacagatttaataaaaaggatGATTACAATAATGCGGCGAGAAATAACTTTGATGCGCAGGATTTCAGGGCGAGATCAGTTAACAAGTTTACGTCTTCATCGGATAATAGATACAAGGGTGAGAAACGTTTTAACAACAGAAAGGATATGAATTATAGGCAAAAGAATTCGCAAGACACACAGCTTCCACCAAGATCTAAATACAGAGATACTCAGAATAGTgggagaaattataataaatttcagaatagtaaatattataataaaagacatCAATCGGATGCATCATTTGTAGAACAATATGGTAATGGAAAAGCTTGTACACCATCTGAATTCAATGGTTCATCCACGTTTGATAGTCAGGAAAATAAGGCTTCTGTTAGAGAACTTCAGGAGAATGACTCATTCTCGGATATTGGTAGAAGCAGAGAGGAAACATGCGAGGATAATAATTCGGAGAAAAATGCCTCTTTGAAAGTTCTTGAGACACAACGAAATAATAAATCCAAGCGATTCACTGACCATGCTAACGCATCTAACTATTAtagatacaattataaatacaaacatcattataaatataattcagatGATGTACAGTCCGAACCTGGTGGTAGACAtaaaactgctgctgctacaaaatatatacataaaagaaaCAATGAAGTGACAGCAAATCATAAAGAGAAGAACTTGGAAAATTGGAGAGATAAGACGGAAGATAATGAGGTAGCACGTAtacaggaaaaaaatattaaaaaaaaacataaaatagaTGATGACGCGAGTCAAAGAGAAAGATTGACGGAACAATTGAACAGGGGAATATTAGAATGTTTAGTGTGTTACGAGCATATCAAACAAAGCGAATACGTTTGGTCTTGCATTAATTGTTATCATGTGTTGCAcctaaaatgcattaaaaaatgggCGAAATCATCTCAGAGcgaGAATGGATGGAAGTGTCCAGCCTGCCGAGACATTAGCTTTCTCGTACCGGAGGATTATTTCTGCTTCtgcggaaagagaaaaatgccaGAGTGGAATCGCAGAGACGTGGCGCACTCATGTGGCGAGATCTGCGGTCGAAATCTATCTAAAAACAATTGCACGCATAAATGTACCCTGCTCTGCCATCCCGGTTCTTGTCCGCAATGCGTGGCGATGGTAACAAAGTATTGTGGTTGCGGAAGAATGTCAAAGATGCTACTGTGCAGTGCTCATGAACTGTTACAGTGCGATTCGATAtgcgaaaaaaatctatcgtGCGGCAAGCATACTTGTCAGAGAAAATGTCATCAGGGAGAATGTGGGCCTTGCAATGAAACTGTGCAACAAActtGTTTTTGTGGTAAAAAAACTCAAGATGTACCTTGCCGAGCAAATGTCACAGATACATATTCCTGTAATAATATCTGTAACAAACCATTGGACTGTGAGAAACATTATTGTCAAAAAGTCTGCCATTCAGAAGCATGCGATCCTTGCTCCTTGACGCCTGAGAGAGTTACAACATGTTGTTGCGGTCAAACGCCATTAttggagaagagagagagttgcTTGGATCCTGTGCCCACTTGTGACAAAATCTGTTCTAAGCGTTTGAAATGCGGTCAACCTAGTAATCCACATATTTGCAAAGCACCGTGCCATGTCGATGAATGTCCGGACTGCGACTTGAACACCGATGTCAAGTGCCGATGCGGTAACATGGATCGCGAGATCGCTTGCAAGGATCTGACAAGTAAAGCCGACGACGCACGCTGCGAGAAGCGTTGTAAGAAGAAACGATCTTGCGGCAAGCATAATTGCAATCAGCTGTGTTGCATCGACATCGAGCATATTTGCCCGTTGCCGTGTTCAAAGACATTAAGTTGTGGTCGGCACAAGTGTCAGGAGAGATGTCACATTGGGAGATGTGCGCCTTGTTGGCAGAGCAGCTTCGAAGAACTATACTGCGAGTGCGGTGCTGAGGTGATTTATCCACCGGTACCATGCGGTACAAGAAGGCCCGTTTGCAATCGACCATGTTCTCGCGAGCATCCTTGCGATCATGAAGTGTTGCATAATTGTCACAGCGAGCCCGCGTGTCCACCTTGCAGCGTCTTGACTCAGAGATGGTGCCATGGTAAACACGAACTTAGAAAGGCTGTGCCATGTCACGTGAAAGAGATCTCATGCGGTCTACCGTGCAACAAGCCGCTAGCGTGCGGACGACATAAATGCATCACAATGTGTCACGCCGGGCCATGCGAAAGACCTGGACAACAATGCATACAACCTTGCAGCACGTCGAGGGAGCTATGTGGACACATCTGTGCCGCTCCGTGTCACGAAGGCAAGTGTCCAGATACTCCTTGCAAAGAAATGGTTAAGGTTACATGTCAGTGTGGACATAGGACTATGAGTCGTGTTTGCGCTGATAATGCGCGAGAGTATCAACGGATAGCAAGCAACATACTAGCCAGTAAAATGGCCGACATGCAGCTCGGTCATTCCGTCGATTTAGAAGAAGTATTTGGGCAAGGCGCGAAGAAACAAAATCAGCTAAAAACCCTGGAGTGCAACGATGAGTGTAAAACAATAGAGAGAAACAGGAGACTCGCGCTAGGACTGCAGATCGTCAATCCTGACTTGAGCGGCAAATTGATGCCCAGATATACTGATTATATGAAACAATGGGCCAAAAAAGATCCGCATTTTTGCCAGATGGTCCACGAGAAACTGACAGAATTGGTCCAATTGGCGAAAACATCTAAGCAGAAGTCTCGAAGTTACTCGTTTGATATTATGAATAGGGAAAAGCGCCATTTCGTGCATGAGTCGTGTCAACATTTTGGCTGTGAAAGTCAAGCATATGATGAAGAACCGAAAAGAAATGTAGTCGCCACTGCTGTAAAAGATAAGTGTTGGCTACCAAGCTATAGTTTGTTAGAAATGGTGCAGCGGGAAAAGGGACAAAGAAAAGTTCCAGGACCAGTACTTAACGCTTCTAAGGGAAATAGTTCTACAAAgACTGTTCTTTCATTACCCATAAAACAGAATCAGAAATCActaccatcatcatcaactgcaaaaacaattgataaagaaatagattattttgacTATCAAGGATGA
Protein Sequence: MATWDGSFPEDPNYCTYSTRDTEDNWTYFNENSSYLRNVPARGYYPGTEGQPAYEQNRPANAFYQHPSNMVPLENTYQGHILPSSSSVASGWQTSNNPRSVNGIASASRNAPFRDNHKPRSKGNRTIDKPTSSEGDIIQSSIVQNSNLHATANEFVPNSVRLNKDRFNKKDDYNNAARNNFDAQDFRARSVNKFTSSSDNRYKGEKRFNNRKDMNYRQKNSQDTQLPPRSKYRDTQNSGRNYNKFQNSKYYNKRHQSDASFVEQYGNGKACTPSEFNGSSTFDSQENKASVRELQENDSFSDIGRSREETCEDNNSEKNASLKVLETQRNNKSKRFTDHANASNYYRYNYKYKHHYKYNSDDVQSEPGGRHKTAAATKYIHKRNNEVTANHKEKNLENWRDKTEDNEVARIQEKNIKKKHKIDDDASQRERLTEQLNRGILECLVCYEHIKQSEYVWSCINCYHVLHLKCIKKWAKSSQSENGWKCPACRDISFLVPEDYFCFCGKRKMPEWNRRDVAHSCGEICGRNLSKNNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRMSKMLLCSAHELLQCDSICEKNLSCGKHTCQRKCHQGECGPCNETVQQTCFCGKKTQDVPCRANVTDTYSCNNICNKPLDCEKHYCQKVCHSEACDPCSLTPERVTTCCCGQTPLLEKRESCLDPVPTCDKICSKRLKCGQPSNPHICKAPCHVDECPDCDLNTDVKCRCGNMDREIACKDLTSKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCAPCWQSSFEELYCECGAEVIYPPVPCGTRRPVCNRPCSREHPCDHEVLHNCHSEPACPPCSVLTQRWCHGKHELRKAVPCHVKEISCGLPCNKPLACGRHKCITMCHAGPCERPGQQCIQPCSTSRELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDIMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMVQREKGQRKVPGPVLNASKGNSSTKTVLSLPIKQNQKSLPSSSTAKTIDKEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00869301;
90% Identity: iTF_00280357; iTF_00731149; iTF_01245615; iTF_00729750;
80% Identity: -