Basic Information

Insect: Polyergus mexicanus
Gene Symbol: stc
Assembly: GCA_030449975.1
Location: JAUDSZ010000006.1:10667945-10672321[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.5 3.5e+04 -3.7 1.1 15 19 488 492 487 492 0.82

2 13 0.13 3.1e+03 -0.4 0.1 4 10 521 527 520 528 0.94

3 13 5.1e-06 0.12 13.8 12.9 3 18 537 552 536 553 0.92

4 13 7.3e-07 0.017 16.5 14.1 1 18 589 606 589 607 0.96

5 13 8.3e-06 0.19 13.1 10.2 3 19 647 663 645 663 0.92

6 13 0.012 2.7e+02 3.0 11.8 4 18 710 724 703 725 0.86

7 13 2 4.6e+04 -4.6 1.6 5 10 754 759 754 759 0.90

8 13 0.0094 2.2e+02 3.3 11.4 1 11 765 775 765 787 0.88

9 13 5.1e-09 0.00012 23.3 11.6 1 19 792 810 792 810 0.98

10 13 2 4.6e+04 -4.4 0.8 6 10 839 843 839 843 0.89

11 13 1.8 4.1e+04 -3.9 7.3 10 19 857 867 855 867 0.78

12 13 7.7e-07 0.018 16.4 11.0 1 16 903 918 903 929 0.85

13 13 7.6e-06 0.18 13.2 13.6 1 19 935 954 935 954 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.5	3.5e+04	-3.7	1.1	15	19	488	492	487	492	0.82
2	13	0.13	3.1e+03	-0.4	0.1	4	10	521	527	520	528	0.94
3	13	5.1e-06	0.12	13.8	12.9	3	18	537	552	536	553	0.92
4	13	7.3e-07	0.017	16.5	14.1	1	18	589	606	589	607	0.96
5	13	8.3e-06	0.19	13.1	10.2	3	19	647	663	645	663	0.92
6	13	0.012	2.7e+02	3.0	11.8	4	18	710	724	703	725	0.86
7	13	2	4.6e+04	-4.6	1.6	5	10	754	759	754	759	0.90
8	13	0.0094	2.2e+02	3.3	11.4	1	11	765	775	765	787	0.88
9	13	5.1e-09	0.00012	23.3	11.6	1	19	792	810	792	810	0.98
10	13	2	4.6e+04	-4.4	0.8	6	10	839	843	839	843	0.89
11	13	1.8	4.1e+04	-3.9	7.3	10	19	857	867	855	867	0.78
12	13	7.7e-07	0.018	16.4	11.0	1	16	903	918	903	929	0.85
13	13	7.6e-06	0.18	13.2	13.6	1	19	935	954	935	954	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTTCCCGGAGGATCCGAATTATTGCACGTATTCCGCTCGAAACGCGGAAGACAATTGGACATACTTCGACGAGAACTCGGCGTATCTGCGAGACGTCCCCGCGAGGAATTACTATCCGAGAGCCGGTGGTCAACCAGCCTACGAACAGAATAGACCCGCCGACGCTTTCTATCAGCATCCGTCGAATATGGTGCCTTTAGAAAATACTTATCAGGAACACATACTGCCAAGCTCGTCCGTTGCAAGCGGCTCGCAAATGTCGAATAATTCACGTTCCGTCAACGGTATCGTCTCAGCTTCGCGTAACATGCCCTTCTTCCGTGACAATCACAAGCCAAGATTCAAAGGCAATAGAACGATCGGTAAGCCTACTTCGTCGGAAAGCGATATCGTTCAATCCAGCATAGTGCAAAACTCAAATTTACAAGCTACAGCCAACGAATTTGTGCCAAACAGTGTTAGATTGAATAAGAAGGACAGATTTAACAAAAAGGACGATTACAATAACGCGGCGAGAGGTAGCTTTGATGCGCAGGAGTTTAGGCCGAGATCAATTAACAAATTTACATCTTCGTCGGATAATAGGTACAAGGGTGAGAAACGCTATAACAATAGAAAGGATGTAAATTATAGGCAAAAAAATTCGCAAGACACACAGGTTCCATCGAGATCTAAGTATAGGGATACTCAGAGTAGTGGGAGaaactataataaatttcagaattgcaaatattataatagaagtCATCAATCGGATGCATCATTTGTAGAACAATATGGTACTGGAAAAGCTCGTACACCTACAATTGAGTTCAGTGATTCATTCACGTTTGATAGCCAGGAAAATAAAACTTCTGCTAAAGAACCTCAAGAGGATGACTCGTCCTCGGATGTTGGTAGAAGCAGAGAGGAAACATgcgagaataatattttggaGAAAAATGCCTCCTTGAAAGCTCTCGAGACACAACGAAATAATAAATCCAAGCGATTCCCTGACCATGCTAACACGTCTaactattataaatacaattataaatacaaacactattataaatacaatttagaCAATGTACAGTCCGAATCTGGTGATAGATATAAAACTGGAGTTGCTACaaagtatatacataaaagaaaCAATGAAATGACAGCAAATCATAAAGAGAAGAACTTTGAAAATTGGAGAGATAAGACGGAAGATAACGAGGCAGCACGTATAcaggaaaaaaatatgaaaaaaagatataaaatcgATGATGACGCGAGTCAAAGGGAAAGATTGACGGAACAATTGAACAGGGGAATATTAGAATGTTTAGTTTGTTACGAGCATATCAAGCAAAGCGAATACGTTTGGTCTTGCACTAATTGTTACCATGTGTTGCATCtaaaatgcattaaaaaatgGGCAAAATCGTCTCAGAGCgAGAATGGATGGAAGTGCCCAGCCTGCCGAGACATTAGTTTTCTTGTACCGGAGGATTATTTCTGTTTCTGtgggaaaagaaaaatgccAGAGTGGAATCGCAGAGATGTGGCGCACTCGTGTGGCGAGATCTGCGGTCGAAATCTGTCTAAAAACAATTGCACGCACAAATGTACCTTGCTCTGCCATCCCGGTTCTTGTCCGCAATGCGTGGCGATGGTTACCAAGTATTGTGGTTGCGGAAGAATGTCGAAGATGCTGCTATGCAGTGCTCATGAACTATTGCAGTGCGATTCGATTTGcgaaaaaaatctatcatGCAGCAAGCACACTTGTCAGAAAAAATGCCATCAGGGAGAATGTGGACTTTGCAATAAGACTGTGCAACAAAccTGTTTTTGTGGTAAAAAAACTCGAGATGTACCTTGCCGAGCAAATATCACAGatacatattcttgtaataACATCTGTAACAAACCATTGGACTGCAAGAAACATTATTGTCAAAAAGTTTGTCATTCAGAGGCATGCGATCCTTGCTCCTTGACGCCCGAAAGAGTCACGACGTGCTGTTGCGGTCAAACGCCATTAacagagaagagagagagttgCTTGGATCCTGTGCCCATCTGTGATAAAATCTGTTCTAAGCGTCTGAAATGCGGTCAGCCTAGTAATCCACACATCTGCAAGGCACCGTGCCACACCGACGAATGTCCGGACTGCGACTTGAATACCGATGTCAAATGTCGATGCGATAACATGAACCGCGAGATTGCTTGCAAGGATCTGAAAAGTAAAGCCGACGACGCGCGCTGCGAGAAGCGTTGCAAAAAGAAACGATCTTGCGGCAAGCATAATTGCAATCAGTTGTGTTGCATCGACATCGAGCACATCTGCCCGTTGCCGTGTTCAAAGACATTGAGTTGTGGTCGGCACAAGTGCCAGGAGAGATGTCACATTGGGAGATGTTCGCCTTGTTGGCAGAGTAGCTTCGAAGAGCTGTATTGCGAGTGTGGTGCTGAAGTGATCTATCCACCGGTACCGTGCGGTACGAGAAGACCCCTTTGTAATCGGCCATGTTCTCGCGAGCATCCTTGCGATCACGAGGTGCTGCACAACTGTCACAGCGAGCCTGCATGTCCGCCTTGCAGTGTTTTGACCCAGAGATGGTGCCACGGTAAACACGAGCTCAGAAAAGCCGTGCCATGCCACGTGAAAGAGATCTCGTGCGGTTTACCGTGCAACAAGCCACTGACGTGCGGACGACATAAATGCATCATGATGTGTCACGCCGGGCCATGTGAAAGACCTGGACAACAATGCATACAACCTTGCAGCACGACGAGAGAGTTATGCGGACATATTTGTGCCGCTCCGTGCCACGAAGGCAAGTGTCCGGATACGCCTTGCAAAGAAATGGTTAAGGTTACATGTCAGTGCGGACATAGGACTATGAGTCGTGTTTGCGCTGATAATGCGCGAGAGTATCAACGGATAGCGAGCAACATACTAGCCAGTAAGATGGCCGACATGCAGCTCGGTCATTCTGTCGATTTAGAAGAAGTATTCGGGCAAGGCGCGAAGAAACAGAATCAGCTAAAAACCCTGGAGTGCAACGATGAATGTAAAACAATAGAGAGAAACAGGAGACTCGCGTTGGGACTGCAGATCGTCAATCCCGACTTGAGCGGCAAGTTAATGCCCAGATATACTGATTACATGAAACAATGGGCCAAAAAAGATCCGCACTTTTGCCAGATGGTTCATGAGAAACTGACAGAATTGGTCCAACTGGCGAAAACATCTAAGCAGAAGTCTCGAAGTTACTCGTTTGACGTTATGAATAGGGAAAAGCGCCATTTCGTGCGTGAGTCGTGTCAACACTTCGGCTGCGAGAGTCAAGCATATGACGAGGAACCGAAAAGAAATGTCGTCGCCACTGCTGTAAAAGATAAGTGTTGGCTACCAAGCTACAGTTTATTAGAAATGGTGCAGCGGGAGAAGGGACAAAGAAAAGTTCCAGGACCGGTACTTAACGCTTCTAAGGGAAATACTTCTATAAAGACTGTTCTTTCGTTACCCATAAAACATAATCAGAAATCACTACCATCGTCATCAACTACAAAAACAATTGATAAGGAGATAGATTATTTTGACTATCAAGGATGA
Protein Sequence: MATWDGSFPEDPNYCTYSARNAEDNWTYFDENSAYLRDVPARNYYPRAGGQPAYEQNRPADAFYQHPSNMVPLENTYQEHILPSSSVASGSQMSNNSRSVNGIVSASRNMPFFRDNHKPRFKGNRTIGKPTSSESDIVQSSIVQNSNLQATANEFVPNSVRLNKKDRFNKKDDYNNAARGSFDAQEFRPRSINKFTSSSDNRYKGEKRYNNRKDVNYRQKNSQDTQVPSRSKYRDTQSSGRNYNKFQNCKYYNRSHQSDASFVEQYGTGKARTPTIEFSDSFTFDSQENKTSAKEPQEDDSSSDVGRSREETCENNILEKNASLKALETQRNNKSKRFPDHANTSNYYKYNYKYKHYYKYNLDNVQSESGDRYKTGVATKYIHKRNNEMTANHKEKNFENWRDKTEDNEAARIQEKNMKKRYKIDDDASQRERLTEQLNRGILECLVCYEHIKQSEYVWSCTNCYHVLHLKCIKKWAKSSQSENGWKCPACRDISFLVPEDYFCFCGKRKMPEWNRRDVAHSCGEICGRNLSKNNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRMSKMLLCSAHELLQCDSICEKNLSCSKHTCQKKCHQGECGLCNKTVQQTCFCGKKTRDVPCRANITDTYSCNNICNKPLDCKKHYCQKVCHSEACDPCSLTPERVTTCCCGQTPLTEKRESCLDPVPICDKICSKRLKCGQPSNPHICKAPCHTDECPDCDLNTDVKCRCDNMNREIACKDLKSKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCSPCWQSSFEELYCECGAEVIYPPVPCGTRRPLCNRPCSREHPCDHEVLHNCHSEPACPPCSVLTQRWCHGKHELRKAVPCHVKEISCGLPCNKPLTCGRHKCIMMCHAGPCERPGQQCIQPCSTTRELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDVMNREKRHFVRESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMVQREKGQRKVPGPVLNASKGNTSIKTVLSLPIKHNQKSLPSSSTTKTIDKEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00869301;
90% Identity: iTF_00280813;
80% Identity: -