Basic Information

Insect: Formica selysi
Gene Symbol: stc
Assembly: GCA_009859135.1
Location: CM020814.1:1680463-1685207[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.77 2.4e+04 -3.7 1.1 15 19 488 492 487 492 0.82

2 13 0.067 2.1e+03 -0.4 0.1 4 10 521 527 520 528 0.94

3 13 2.5e-06 0.081 13.8 12.9 3 18 537 552 536 553 0.92

4 13 4.4e-08 0.0014 19.4 15.5 1 18 589 606 589 607 0.97

5 13 3.4e-06 0.11 13.4 10.1 1 19 645 663 645 663 0.92

6 13 0.0031 1e+02 3.9 11.2 4 18 710 724 703 725 0.86

7 13 1 3.2e+04 -4.6 1.6 5 10 754 759 754 759 0.90

8 13 0.0047 1.5e+02 3.3 11.4 1 11 765 775 765 787 0.88

9 13 2.6e-09 8.1e-05 23.3 11.6 1 19 792 810 792 810 0.98

10 13 1 3.2e+04 -4.4 0.8 6 10 839 843 839 843 0.89

11 13 0.88 2.8e+04 -3.9 7.3 10 19 857 867 855 867 0.78

12 13 5e-07 0.016 16.0 12.1 1 16 903 918 903 929 0.85

13 13 3.8e-06 0.12 13.2 13.6 1 19 935 954 935 954 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.77	2.4e+04	-3.7	1.1	15	19	488	492	487	492	0.82
2	13	0.067	2.1e+03	-0.4	0.1	4	10	521	527	520	528	0.94
3	13	2.5e-06	0.081	13.8	12.9	3	18	537	552	536	553	0.92
4	13	4.4e-08	0.0014	19.4	15.5	1	18	589	606	589	607	0.97
5	13	3.4e-06	0.11	13.4	10.1	1	19	645	663	645	663	0.92
6	13	0.0031	1e+02	3.9	11.2	4	18	710	724	703	725	0.86
7	13	1	3.2e+04	-4.6	1.6	5	10	754	759	754	759	0.90
8	13	0.0047	1.5e+02	3.3	11.4	1	11	765	775	765	787	0.88
9	13	2.6e-09	8.1e-05	23.3	11.6	1	19	792	810	792	810	0.98
10	13	1	3.2e+04	-4.4	0.8	6	10	839	843	839	843	0.89
11	13	0.88	2.8e+04	-3.9	7.3	10	19	857	867	855	867	0.78
12	13	5e-07	0.016	16.0	12.1	1	16	903	918	903	929	0.85
13	13	3.8e-06	0.12	13.2	13.6	1	19	935	954	935	954	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTTCCCGGAGGATCCGAATTATTGCACGTATTCCGCTCGAAACGCGGAAGACAATTGGACATACTTCGACGAGAACTCGGCGTATCTGCGAGACGTCTCCACGAGGAACTACTATCCAGGAGCCGGTGGTCAACCAGCATACGAACAGAATAGACCCGCCGACGCTTTCTATCAGCATCCGTCGAATATGGTGCCTTTAGAAAATACTTATCAGGAACACATACTGCCAAGCTCGTCCGTTGCAAGCGGCTCGCAAATGTCGAATAATTCACGTTCCGTCAACGGTATCGCCTCAGCTTCGCGTAACGCGCCCTTCTTCCGTGACAATCACAAGCCAAGATTCAAGGGCAATAGAACGATCGGTAAGCCTACTTCGTCGGAAGGCGAAATCGTCCAGTCCAGCATAGTGCAAAACTCAAATTTACAAGCTACAGCCAACGAATTTGTGCCAAACAGTGTTAGATTGAATAAGAAGGACAGATTTAACAAAAAGGACGATTACAATAACGCGGCGAGAGGTAGCTTTGATGCGCAGGAATTCAGGCCGAGATCAATTAACAAATTTACGTCTTCGTCGGATAATAGGTACAAGGGTGAGAAACGCTATAACAACAGAAAGGATGTAAATTATAGGCAAAAGAATTTGCAAGACACACAGGTTCCATCAAGATCTAAGTATAGGGATACTCAGAATAGTGGGAGaaactataataaatttcaaaattccaaatattataatagaagaCATCAATCGGATGAATCATTTGTAGAACAATATGCTACTGGAAAAGCTCGTACACCTACAATTGAGTTCAGTGATTCATTCACGTTGGATAGCCAGGAAAATAAGGCTTCTGCTAAAGAACTTCAGGAGGATGACTCATCCTCGGATGTCGGTAGAAGCAGAGAGGAAACATgcgagaataatattttggaGAAAAATGCCTCCTTGAAAGCTCTTGAGACACAACGAAATAATAAACCCAAGCGATTCACTGACCATGCTAATACGTCTAACTATTATagatacaattataaatacaaacaCTATCATAAATACAATTTAGACGATGTACAGTCCGAATCTGGTGATAGATATAAAACTGGAGTTGCTACaaagtatatacataaaagaaACAATGAGGTGACAGCAAATCATAAAGAGAAGAACTTTGAAAATTGGAGAGATAAGACGGAAGATAACGAGGCAGCACGTATACAggaaaaaaatacgaaaaaaaaacataaaatcgATGATGACGCGAGTCAAAGGGAAAGATTGACGGAACAATTGAACAGAGGAATATTAGAATGTTTAGTCTGTTACGAGCATATCAAGCAAAGCGAGTACGTTTGGTCTTGCACTAACTGTTACCACGTGTTGCAtctaaaatgcattaaaaaatggGCCAAATCATCTCAGAGCGAGAACGGATGGAAGTGCCCAGCCTGCCGAGACATTAGTTTTCTTGTACCGGAGGATTATTTCTGTTTCTGCGGGAAAAGAAAGATGCCAGAGTGGAATCGCAGGGACGTGGCGCACTCGTGTGGCGAGATCTGTGGTCGAAATCTGTCGAAAAACAATTGCACGCACAAATGTACCCTGCTCTGCCATCCCGGTTCTTGTCCGCAATGTGTGGCGATGGTTACAAAGTATTGTGGTTGTGGAAGAATGTCAAAGATGATGCTATGCAGTGCTCATGAACTGTTGCAGTGCGATTCGATATGCGAAAAAAATCTGTCATGCGGCAAGCACACTTGTCAGAAAAAGTGCCATCAGGGAGAATGTGGGCTTTGCAATGAGACTGTGCAACAAActtGTTTTTGTGGTAAGAAAACTCAAGATGTACCTTGCCGAGCAAATGTCACAGATACATATTCCTGTAGTAACATCTGTAACAAACCATTGGACTGCGAGAAACATTATTGTCAAAAAGTCTGTCATTCAGAGGCATGCGATCCGTGCTCCTTGACGCCCGAGAGAGTCACGACCTGCTGTTGCGGTCAAACGCCATTAacggagaagagagagagttgCTTGGATCCTGTGCCCATCTGTGATAAAATTTGTTCTAAGCGTCTGAAATGCGGTCAGCCTAGTAATCCACACATGTGCAAGGCACCGTGCCACGTCGACGAATGTCCGGACTGCGACTTAAACACCGATGTCAAGTGCCGATGCGGTAACATGGACCGCGAGATTGCTTGCAAGGACCTGACAAGTAAAGCCGACGACGCGCGCTGCGAGAAGCGTTGCAAGAAGAAACGATCCTGCGGCAAGCATAATTGCAATCAATTGTGTTGCATCGACATCGAGCACATCTGCCCGTTGCCGTGTTCAAAGACATTGAGTTGTGGTCGGCACAAATGCCAGGAGAGATGTCACATTGGGAGATGTTCGCCTTGTTGGCAGAGTAGCTTCGAAGAGTTGTACTGCGAGTGTGGTGCTGAAGTGATCTATCCACCAGTACCGTGCGGTACAAGGAGACCCGTTTGCAATCGGCCATGTTCTCGTGAACATCCTTGCGATCACGAAGTGCTGCACAATTGTCACAGCGAGCCCGCGTGTCCGCCTTGCAGCGTCTTGACCCAGAGATGGTGCCACGGTAAACACGAACTCAGAAAGGCCGTACCATGCCACGTGAAAGAGATCTCGTGCGGTTTACCGTGCAACAAGCCGCTGACGTGCGGACGACATAAATGCATCACGATGTGTCACGCCGGGCCATGTGAAAGACCCGGACAACAATGCATACAACCTTGCAGCACGACGAGAGAGTTATGCGGACATATTTGTGCCGCTCCGTGCCACGAAGGCAAGTGTCCGGATACGCCTTGCAAAGAAATGGTTAAGGTTACATGTCAGTGCGGACATAGGACTATGAGTCGTGTTTGCGCTGATAATGCACGAGAGTATCAACGGATAGCGAGCAACATACTAGCCAGTAAGATGGCCGACATGCAGCTTGGTCATTCTGTCGATTTGGAAGAAGTATTCGGGCAAGGTGCGAAGAAACAGAATCAGCTAAAAACCCTGGAGTGCAACGATGAATGTAAAACAATAGAGAGAAACAGGAGACTCGCGCTGGGACTGCAGATCGTCAATCCCGACTTGAGCGGCAAGTTGATGCCCAGATATACTGATTACATGAAACAATGGGCCAAGAAAGATCCGCACTTTTGCCAGATGGTCCACGAGAAACTGACAGAATTGGTCCAACTGGCGAAAACATCTAAGCAGAAGTCTCGAAGTTACTCGTTTGACGTTATGAATAGGGAAAAGCGCCATTTCGTGCATGAGTCGTGTCAACACTTTGGCTGCGAGAGTCAAGCATACGATGAGGAACCGAAAAGAAATGTCGTCGCCACTGCTGTAAAAGATAAGTGTTGGCTACCAAGCTATAGTTTATTAGAAATGGTGCAGCGGGAGAAGGGACAAAGAAAAGTTCCAGGACCGGTACTTAACGCTTCTAAGGGAAATAGTTCTATAAAGACTGTTCTTTCGTTACCCATAAAACAGAATCAGAAATCACTACCATCGTCATCAACTGCAAAAACAATTGATAAGGAGATAGATTATTTTGACTATCAAGGATGA
Protein Sequence: MATWDGSFPEDPNYCTYSARNAEDNWTYFDENSAYLRDVSTRNYYPGAGGQPAYEQNRPADAFYQHPSNMVPLENTYQEHILPSSSVASGSQMSNNSRSVNGIASASRNAPFFRDNHKPRFKGNRTIGKPTSSEGEIVQSSIVQNSNLQATANEFVPNSVRLNKKDRFNKKDDYNNAARGSFDAQEFRPRSINKFTSSSDNRYKGEKRYNNRKDVNYRQKNLQDTQVPSRSKYRDTQNSGRNYNKFQNSKYYNRRHQSDESFVEQYATGKARTPTIEFSDSFTLDSQENKASAKELQEDDSSSDVGRSREETCENNILEKNASLKALETQRNNKPKRFTDHANTSNYYRYNYKYKHYHKYNLDDVQSESGDRYKTGVATKYIHKRNNEVTANHKEKNFENWRDKTEDNEAARIQEKNTKKKHKIDDDASQRERLTEQLNRGILECLVCYEHIKQSEYVWSCTNCYHVLHLKCIKKWAKSSQSENGWKCPACRDISFLVPEDYFCFCGKRKMPEWNRRDVAHSCGEICGRNLSKNNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRMSKMMLCSAHELLQCDSICEKNLSCGKHTCQKKCHQGECGLCNETVQQTCFCGKKTQDVPCRANVTDTYSCSNICNKPLDCEKHYCQKVCHSEACDPCSLTPERVTTCCCGQTPLTEKRESCLDPVPICDKICSKRLKCGQPSNPHMCKAPCHVDECPDCDLNTDVKCRCGNMDREIACKDLTSKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCSPCWQSSFEELYCECGAEVIYPPVPCGTRRPVCNRPCSREHPCDHEVLHNCHSEPACPPCSVLTQRWCHGKHELRKAVPCHVKEISCGLPCNKPLTCGRHKCITMCHAGPCERPGQQCIQPCSTTRELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDVMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMVQREKGQRKVPGPVLNASKGNSSIKTVLSLPIKQNQKSLPSSSTAKTIDKEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00869301;
90% Identity: iTF_00280813;
80% Identity: -