Basic Information

Insect: Cataglyphis hispanica
Gene Symbol: RREB1
Assembly: GCA_004195275.1
Location: SGAY01000750.1:20666-29081[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0046 0.59 11.4 4.0 1 23 99 121 99 121 0.97

2 15 0.00017 0.022 15.9 0.1 1 23 135 157 135 157 0.98

3 15 5.9e-05 0.0075 17.4 4.2 1 21 163 183 163 186 0.95

4 15 0.0027 0.34 12.2 0.0 3 23 285 306 283 306 0.96

5 15 0.0013 0.17 13.1 3.3 2 23 312 334 312 334 0.96

6 15 0.86 1.1e+02 4.3 0.1 1 23 558 580 558 580 0.96

7 15 9.6e-05 0.012 16.7 0.2 1 23 589 611 589 611 0.98

8 15 0.0043 0.56 11.5 3.1 1 23 617 640 617 640 0.96

9 15 0.011 1.4 10.3 1.6 3 23 1009 1030 1007 1030 0.96

10 15 0.00011 0.014 16.6 0.1 2 23 1298 1319 1297 1319 0.97

11 15 4.3 5.5e+02 2.1 10.0 1 23 1325 1348 1325 1348 0.96

12 15 0.0042 0.54 11.5 2.2 1 23 1391 1415 1391 1415 0.97

13 15 0.084 11 7.5 1.8 1 23 1496 1518 1496 1519 0.96

14 15 0.016 2 9.7 0.4 3 23 1571 1591 1569 1591 0.93

15 15 0.0027 0.35 12.2 5.2 1 23 1597 1619 1597 1619 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0046	0.59	11.4	4.0	1	23	99	121	99	121	0.97
2	15	0.00017	0.022	15.9	0.1	1	23	135	157	135	157	0.98
3	15	5.9e-05	0.0075	17.4	4.2	1	21	163	183	163	186	0.95
4	15	0.0027	0.34	12.2	0.0	3	23	285	306	283	306	0.96
5	15	0.0013	0.17	13.1	3.3	2	23	312	334	312	334	0.96
6	15	0.86	1.1e+02	4.3	0.1	1	23	558	580	558	580	0.96
7	15	9.6e-05	0.012	16.7	0.2	1	23	589	611	589	611	0.98
8	15	0.0043	0.56	11.5	3.1	1	23	617	640	617	640	0.96
9	15	0.011	1.4	10.3	1.6	3	23	1009	1030	1007	1030	0.96
10	15	0.00011	0.014	16.6	0.1	2	23	1298	1319	1297	1319	0.97
11	15	4.3	5.5e+02	2.1	10.0	1	23	1325	1348	1325	1348	0.96
12	15	0.0042	0.54	11.5	2.2	1	23	1391	1415	1391	1415	0.97
13	15	0.084	11	7.5	1.8	1	23	1496	1518	1496	1519	0.96
14	15	0.016	2	9.7	0.4	3	23	1571	1591	1569	1591	0.93
15	15	0.0027	0.35	12.2	5.2	1	23	1597	1619	1597	1619	0.98

Sequence Information

Coding Sequence: ATGCGCATAAATATCGGCGAGTCAAATGCGAGATTTCTGGAAAGAGAATGCAAAGCCGTATTACGTCCTTCGACTATATTAAAGACGGTCGAGTGCGGTCAGGACGTCAGGCGGAGGACGTTGATAAATGTTATTGTCCCGGCTTCACTTGCGGTTCGGGGTATCAGCTTCCGGAATACTCGGTCAGATTTGTGTCCTGTCCTATGTATCGCGCTGACACAGTTCTTTAAGACCTCCGAAGAGAGGACGCGACACACCGGCGAAAATCCGGTGGAGCTATCGGAGAATGGCGCGCATCCGTGCCCAATGTGCTCGTCAATATTTTCCAGTTGCCACGAACTGACGAATCATCTGCGCGGCCATAACTCACCTCGTAGCACAGACTGCAGCGGTGAGGAGGATTACAGCTGCGGGGTTTGCAACAAAGTTCTCAGCTCGGCAAGCTCGCTAGACCGACACGTTTTGGTACACTCGGGCGAACGGCCGTTCAAGTGCAAATACTGCGACATGTCGTTCACGACGAATGGCAATATGAACCGTCACGTGAGGTGCACCCATCGGGTGGCATCGCCCAACAGTTGCACGGACTCCGAGGGTAGCAACGGCTCGGAGAGACCGGTGACGACGAATCAGGATGAGTACAACAACAACGAATTAGCAAGGCGTAATTCGCCGACCCTAATCGACGACCGGCAACAACCGTCATCGCCCGATAATCATCGCGCGAACAAACGAAAATGCTTGCAGGATGACGCTAGCGACACGGAGGAGCAGAAGAGGCACAAGACTCTTATGAATAATACCAGAATTATGATTAGATGCCAATCGGATGTGGAGCAGATGACATTCGGTTGTATGATTTGTGGCAAAGACTTCGTGAGCGGCGCGATGTTAGAGGCTCATATGGAACGCGTGCATCCGGAATCCCTGGCCACCTGCGAGATCTGCAACATGACCTTCAAGAATCATCGGCAATTGAACCTCCATCGTTCTATGAGTCACTACAAGAAGAACGCAGGCGGCAACAACAGCCGTCGCAGCACCGTGGACGGTTTCGGCGATCTCACGTTCATGGACTTCTCGGCGGCGAAATTCTCGGAGATCGCTCGACGGATGTGCGAGCAGGAACTGCATCGACCAGCCTCTGGTGAGGTCAACAGATTCCAATGCATGAAGTGCCTGCATGCGTTTCCGTGCAGACAGGCGCAGCTCGATCACGAAAAAGAATGCAAGGGTCCGTACAAAAATAAGAGGAATAGCAATGACAGTAACAATAACAATGATAACAATACCAATAACAATCTCGAAACGGAACTAGACGCTCCGTCCCCGCAGTCCGACGATCCGAAAACGACGCGCGAGATCTTTTTCGCCGTGTTAGATCTGCAGAATAAATCCTTGGCGCGCGAAGTGAAGGAATCCAGGGAACCAAAAGAGACCAAGGAGACAAAGGAGATGAAGGATCTAGCGGATATCCCGAGCATTTTGTCCGTCAGTTTGAATGGGCTGCCGACTTTTCCGCGATCAGATACCAGCACGCCCGAGAACATCAAGTTTAATCCGAATATCGGCTCTTCGGGTTCCTCAGGCACCTGCTCGTCTGAATATAACGAGGAGGAGGCGCAGGATGCTTTCACTGCGGAATTCCGAAAGATGAAACTCAAGGGCGAGTTTCCCTGCAGATTGTGCGCATCAGTATTCCCCAATCTGCGAGCGCTCAAAGGACACAATCGCGCGCATATGAACGTGGAGCCGGGAATGCCGTATCCGTGCAATATGTGCCCCTTCACCAGTACTGACAAAGGGGCCTTGTTGAAGCACTTGAGATCGCATAATGGTGATCGACCTTTCGAATGCTCCCTCTGCAATTACGCGTTTACCACCAAGGCAAATTGCGAGAGGCATGTAAAGAATCGCCATGGAATGATTAGCAAGGAGGATGTTAAGAGTGCGCTGATCTATCATCCAAGCGAGGATTCGACGAATGAAAATGTCGAAAGGAGCTCGCCAAGAGGTATCAGGGACGACGTGCGAAAAACGCTCGTCTATCCGAACGAGCGTGAAGAAGTTTCTCAACAACAGATACATTATCCATCTGTATCGATGGATTGTAATCCAGGACCTTCAAATGTTTGTGCTGAGATACTGATGAATTGTTACGAAAAGCCGGACATATTCCATAGACCAACGGCTCTGAATCTCGTGAAGAAAACCGCCGAGGAATCGAATGGATCTCATGATTTGATCGTGAAGTCTAATTATTCGAAGATCGATGAGGACATTGAGTCAAGATCATCGGATGGCAGCGTGTCTCTAGTCAGCGATACCAAAACAGATACACACCAAAGAATTCAAGCTAGTCCGATAAATCTGACCAAGTCCACGACAAGCTCCATGTTAAATTCAGGAGAGGACGCTCCTTTGGATTTATCCATGGACGTTGTTCTAGATCTTAGCAGGAAACGTAAAAGGGAGAATGAAAATTCTCAGGAGGAGAAACATTATAAGAACAATCAACAAGAATTGTATGCCGCGAATCCGGCACTGCTGCTGACTCAAGCTCTACTGAACAGAGCACGCGAAAATTCGACTACGTCATTGGAGAATTTTTGTGCAAGTACCTTCTATCGTAATCTCAACACGTTAACTGGCGCCTCTATGATACCGCCGTATTTTCTCAATCCTCACATGTTCGGTCAGGAATTGACCGAGAAAAGCAAATTGCAGAAAGAGCTAGTCAGAGGTTTGCAGTTGACCGGCGGCAATACCTTTCCAGTGGATCCATCACTGCCCAGCACTAGTTACGCGGCAGCATACGCGCAGGCGCGGGATATCCCGCAAACCTCGAGCGAACACAATGCTTACACGAATTTGATGAACGCGCAGATAGCCAACCAGGTCGCACCGAGCCGCGAGAAAGCGGATAACATTTCATCCAACGATCCTGTGAAAATGGTACTCAAAAACGGCGTGCTTATACCCAAACAAAAGCAGCGCAGATACCGCACCGAAAGACCGTTCGGCTGCGAGCACTGCGTGGCAAGATTCACACTGCGAAGCAACATGGAACGACATATTAAGCAACAGCATCCTCAGTGTTGGAGCCAAAGACCCCGCGGCGGACATTCAACTAGAGGCAGACCGCCCGCGAATCCGAATACAATGCAGAATTCCGCCCCGTCAACTTCGCAAGTAATTCAACCATATCCGAATATTCTTCAAAACGTCGACTCGTCCATGATTACATCGGACTATAATACGCATCCCATTTCAGATCAAGTAAAGTATGCCATTCTAGCACAACAATTAAAAGCCGATAAAATAGATGACAATGATTCGGAGGACGAAATGGTAATAGATGAAGAATCAGGCGACAGGGATGCACAGGAGCCGCAAGCTCAGCACGAGCGTAGCACAAGCTTGCTGAGAGATCAGTTAGAGAGTAACGAGGGTGTTAAAAACATTGTCGTGAAAAAGGAACTAATTGACCCCACGGAAGAGACTTTGGAAGAATCTCACGGTGAACAAGCTGCACGAAACGGCATAGACAGGATCAATGCTGATGAACCTGTGGCTACTGAAAATAAGTCGATACACAGCAAAGAGACGATCAAGACAGAACCCTCTGGAAAAGAGCAGGGCAAACTCGAGGACGGAGCAGCCGATCTCGCGAGTGTCTCGAAACTATTGGACAATGCGTCTCAGCAGTATCAGGAATTCAAACCGCAATACTTGAGCGACGAAGAAGGCCCTGTTGCCTCGACCAGTGGCAACAATTCCGGTAGCGAAAAATCCGACTCGAATTCTTTAAACTCCGGAAATGATTCttcgtcaaataaaaaaaaaaagaagaagaagaagtccGCGTATTCGATGGCACCGAATCGAGTCCCGTGCCCTTATTGCCCGCGTCAGTTCCCCTGGAGCTCATCGCTGAGACGGCACATCCTCACTCATACCGGCCAGAAGCCCTTTCAGTGCACACACTGCTTGCATTACTTCACCACAAAGTCCAATTGCGACCGCCACTTGTTGAGAAAACACAAGGCAAAGGCCAATAAAATGCGCCGTGTTAGAAATTCCTCCTCGCCAGAGGTACAGGTGGTTGCTAGCAGCAGCAGCGGTAGCAGTAACAATATGTTCTCCATGAGAAACGTGCCCGAGAGACCATACAAGTGCAATCAGTGCCCAAGCTCGACCTTCTCTACATTAGGCAATCTGAAGAAGCATCGATCGACCAAGCATCGTAAGATTACGTCTCGGTCGGAGTCCAGCGATCAACAGAATAGTCCACCGCAGTGCTCCAACACGCAGAACGATCATAGTGATTACGAGAGCCGATCGTCGAGCGCGTCCGAGAACATGGAGAATTCCGCTAGCGCAGCCGTGAAAGCGAATTCTAATACAACGTCTCTAACATCGATGAATGAGATGACCAGATCGCGCAAGTCGCCAAGATCGTCGCCTGGTCCCAGCGATGCTCCCTTCAAATGTTATTTGTGCGACAGCGGCTTTTCCGAGCGTCAAGATAATTTGAATCACATCAAAATACATCACAAGCGCTCGTACGATATGCTGAAGGCCAAGGGCGCCCTCGATATGGCATCTATGAATATAGACGCGAATGATGATCAGATGGCACAGCAACATCCTAGTGACGGCGAAGAGAAGAGGGGTCGATTTCCTGATTACAGTAATAGAAagGTTATATGTGCTTTCTGTATGAGACGGTTCTGGTCCGCGGAAGATCTCCGGCGTCACATGAGGACCCACACGGGAGAAAGACCCTTCGAATGTGACATCTGCACGAGGAAGTTCACGCTGAAACACAGCATGCTGCGCCATCGTAAAAAACACGAGTCTGTGGATTCTGCTATGTATATAGGTAACAGCGGTGATGAGGACAACTCACCTGCACAGCCACCGACGATAACGCCTAGAAGTCAACAACATTCGCCAATCTCTACAAATACTAGCAGGCCTCGTACCCAGGACAGAATCTCTCTGCCGACTGTTGCGGCGGTTGCAACAGCGGACGCGGCACCTTGTGCGCTTATGCGATACAATCACTATGACAACATGGCTACTCTCACCGGCAGAATGGCAAATGACAACTCGCAGAACGCTGCGCCTGCTGCTCTGCCTTCCCCGCCACCTCCGGCGGAGGTGCCCAGCGAGAGCGGTGATAACGACTTGATCTCCAATCTGCTGGGCATTCGCGAGAAAGGTTTGCTTGATAAGGTTCTTCTGAGCTCAGCGGACGATGCGGCCAAGTTGTTGGGTGTCAATCATAGCGAGTGA
Protein Sequence: MRINIGESNARFLERECKAVLRPSTILKTVECGQDVRRRTLINVIVPASLAVRGISFRNTRSDLCPVLCIALTQFFKTSEERTRHTGENPVELSENGAHPCPMCSSIFSSCHELTNHLRGHNSPRSTDCSGEEDYSCGVCNKVLSSASSLDRHVLVHSGERPFKCKYCDMSFTTNGNMNRHVRCTHRVASPNSCTDSEGSNGSERPVTTNQDEYNNNELARRNSPTLIDDRQQPSSPDNHRANKRKCLQDDASDTEEQKRHKTLMNNTRIMIRCQSDVEQMTFGCMICGKDFVSGAMLEAHMERVHPESLATCEICNMTFKNHRQLNLHRSMSHYKKNAGGNNSRRSTVDGFGDLTFMDFSAAKFSEIARRMCEQELHRPASGEVNRFQCMKCLHAFPCRQAQLDHEKECKGPYKNKRNSNDSNNNNDNNTNNNLETELDAPSPQSDDPKTTREIFFAVLDLQNKSLAREVKESREPKETKETKEMKDLADIPSILSVSLNGLPTFPRSDTSTPENIKFNPNIGSSGSSGTCSSEYNEEEAQDAFTAEFRKMKLKGEFPCRLCASVFPNLRALKGHNRAHMNVEPGMPYPCNMCPFTSTDKGALLKHLRSHNGDRPFECSLCNYAFTTKANCERHVKNRHGMISKEDVKSALIYHPSEDSTNENVERSSPRGIRDDVRKTLVYPNEREEVSQQQIHYPSVSMDCNPGPSNVCAEILMNCYEKPDIFHRPTALNLVKKTAEESNGSHDLIVKSNYSKIDEDIESRSSDGSVSLVSDTKTDTHQRIQASPINLTKSTTSSMLNSGEDAPLDLSMDVVLDLSRKRKRENENSQEEKHYKNNQQELYAANPALLLTQALLNRARENSTTSLENFCASTFYRNLNTLTGASMIPPYFLNPHMFGQELTEKSKLQKELVRGLQLTGGNTFPVDPSLPSTSYAAAYAQARDIPQTSSEHNAYTNLMNAQIANQVAPSREKADNISSNDPVKMVLKNGVLIPKQKQRRYRTERPFGCEHCVARFTLRSNMERHIKQQHPQCWSQRPRGGHSTRGRPPANPNTMQNSAPSTSQVIQPYPNILQNVDSSMITSDYNTHPISDQVKYAILAQQLKADKIDDNDSEDEMVIDEESGDRDAQEPQAQHERSTSLLRDQLESNEGVKNIVVKKELIDPTEETLEESHGEQAARNGIDRINADEPVATENKSIHSKETIKTEPSGKEQGKLEDGAADLASVSKLLDNASQQYQEFKPQYLSDEEGPVASTSGNNSGSEKSDSNSLNSGNDSSSNKKKKKKKKSAYSMAPNRVPCPYCPRQFPWSSSLRRHILTHTGQKPFQCTHCLHYFTTKSNCDRHLLRKHKAKANKMRRVRNSSSPEVQVVASSSSGSSNNMFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHRKITSRSESSDQQNSPPQCSNTQNDHSDYESRSSSASENMENSASAAVKANSNTTSLTSMNEMTRSRKSPRSSPGPSDAPFKCYLCDSGFSERQDNLNHIKIHHKRSYDMLKAKGALDMASMNIDANDDQMAQQHPSDGEEKRGRFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFECDICTRKFTLKHSMLRHRKKHESVDSAMYIGNSGDEDNSPAQPPTITPRSQQHSPISTNTSRPRTQDRISLPTVAAVATADAAPCALMRYNHYDNMATLTGRMANDNSQNAAPAALPSPPPPAEVPSESGDNDLISNLLGIREKGLLDKVLLSSADDAAKLLGVNHSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01016049;
90% Identity: iTF_00868296;
80% Identity: -