Basic Information

Insect: Cataglyphis hispanica
Gene Symbol: -
Assembly: GCA_004195275.1
Location: SGAY01007074.1:2161-6931[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.4 4.4e+02 2.4 9.6 2 23 289 311 288 311 0.97

2 19 0.04 5.1 8.5 2.2 1 23 363 385 363 385 0.97

3 19 0.028 3.6 8.9 1.5 1 23 434 456 434 456 0.98

4 19 0.06 7.7 7.9 0.3 1 20 507 526 507 527 0.93

5 19 0.21 28 6.2 2.1 1 23 568 590 568 590 0.94

6 19 0.00012 0.015 16.4 0.7 1 23 633 655 633 655 0.97

7 19 0.00036 0.047 14.9 0.1 1 23 661 683 661 683 0.97

8 19 8e-06 0.001 20.1 0.4 1 23 728 751 728 751 0.96

9 19 0.0005 0.064 14.5 2.0 1 23 757 780 757 780 0.96

10 19 5.5e-06 0.0007 20.6 1.0 2 23 787 809 786 809 0.97

11 19 0.00027 0.034 15.3 0.0 1 23 817 839 817 839 0.92

12 19 0.062 8 7.9 0.3 1 20 901 920 901 920 0.97

13 19 0.00031 0.04 15.1 0.1 2 23 940 961 939 961 0.97

14 19 0.062 7.9 7.9 4.0 1 23 974 996 974 996 0.97

15 19 0.0043 0.55 11.5 2.3 1 23 1018 1041 1018 1041 0.92

16 19 0.0014 0.18 13.1 2.6 2 23 1100 1122 1099 1122 0.96

17 19 0.00046 0.059 14.6 0.9 1 23 1144 1167 1144 1167 0.93

18 19 5.7 7.3e+02 1.7 3.7 1 23 1201 1225 1201 1225 0.91

19 19 0.0078 1 10.7 0.4 2 23 1254 1276 1254 1276 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.4	4.4e+02	2.4	9.6	2	23	289	311	288	311	0.97
2	19	0.04	5.1	8.5	2.2	1	23	363	385	363	385	0.97
3	19	0.028	3.6	8.9	1.5	1	23	434	456	434	456	0.98
4	19	0.06	7.7	7.9	0.3	1	20	507	526	507	527	0.93
5	19	0.21	28	6.2	2.1	1	23	568	590	568	590	0.94
6	19	0.00012	0.015	16.4	0.7	1	23	633	655	633	655	0.97
7	19	0.00036	0.047	14.9	0.1	1	23	661	683	661	683	0.97
8	19	8e-06	0.001	20.1	0.4	1	23	728	751	728	751	0.96
9	19	0.0005	0.064	14.5	2.0	1	23	757	780	757	780	0.96
10	19	5.5e-06	0.0007	20.6	1.0	2	23	787	809	786	809	0.97
11	19	0.00027	0.034	15.3	0.0	1	23	817	839	817	839	0.92
12	19	0.062	8	7.9	0.3	1	20	901	920	901	920	0.97
13	19	0.00031	0.04	15.1	0.1	2	23	940	961	939	961	0.97
14	19	0.062	7.9	7.9	4.0	1	23	974	996	974	996	0.97
15	19	0.0043	0.55	11.5	2.3	1	23	1018	1041	1018	1041	0.92
16	19	0.0014	0.18	13.1	2.6	2	23	1100	1122	1099	1122	0.96
17	19	0.00046	0.059	14.6	0.9	1	23	1144	1167	1144	1167	0.93
18	19	5.7	7.3e+02	1.7	3.7	1	23	1201	1225	1201	1225	0.91
19	19	0.0078	1	10.7	0.4	2	23	1254	1276	1254	1276	0.96

Sequence Information

Coding Sequence: ATGGAGGACGAGGACGTGGTGGAAATCGGAAACGTGGAGAATGTCTGCCGGCTATGTCTGTCGGTGGACGAGCCGAGGTTCTCGGTGTTCGCGCAGGACCGAGAGGAAGACTCATCCGGCGTGCCGTTGGCCGTCAAGATACAGGCTTGCCTGTCGATCCAGATTTCAGCCACTGATAGGTTGTCTACGCTGATATGCACGAATTGTGTGAAGAATGTTAATCAATGGCATACCTACAAGGAGTCATGTCAGCGTTCACAggataagctacaagaatgGCTGGCAACTCAGTCGCAACCAAATCCTACAGTTATAACAATCAAGGATGAGCCAATGGATATTGATTATGAGGACAATATAGAGATTATCTCAGAAATTACCAATAACTTGGATCAACAATATTCATCAGCTCAAACAATGGAAAATGAGGAGACTGATAATAAGGAAGTGCAAGAAATAATAGATGAAACTGATGCAGAAATTGATGCGAAAACTGATGCGGAAACTGACGCAAGAACTGACGCGAAAGTTGATGCACATAAAGAGGATGATTCGGAAACAGTTCCATCTGCCACTGAGATGCAGCTTGACAAAGATCAAGATCAAATGGGTCAGCAGGATTCTACAGTTCTACgttctattaaaattgaacCACAGGATGACGATGATACCGATTGCACTATCGAAGTAGAATCCGCAAACGGcagtgaattattattaaatcctaTGGCGGTTGCCGCGAAGGAAGATACGGTTATGGAGGCTGATTCTACGCAAAAATCTAATGCGGCTAGCGTGCCGCCCAAAAAGAAACTTAGGCGCGGTCCTCATACTCATTTTAGAGGAACGCGtgtctttaaaaagaaatgcacGCATTGTcagatttttttgcattccAAACATTCATACATGAATCACATGAAGAGATTCCACAGTAAGGAAAATAACGGTATCGACAACTTGGAGTCGATATCGCAGAATGACGACGAAGAGATGGTGGAAGATTTAGAAGACGAGTTGGTTAGTATGGAAAAGGACTCGCCACTAACGCAGGTCCAACAGGAGATTATCAGCCAATTGAAAACATTCTCCTGCTATTCCTGTGAGCAGACATTTAACGATCGGCGTAGCACGCTTTCTCATATACGCCAACATTTGCCGGACTTGAGACCGTATACGTGCATTGCTTGCTTGACTGAATTCTCCGATCGGTCCATGTACCAATTACATTGCGGCGCATCTTTTGAGTGCGCTATGAAGATTGCCCTCGTAGTGCCTAAGCATGGTAACGAGCGGTACTTTACATGTAACATGTGCCTACGTTCAATGCGTGACAGAAAAGAATTGCTGAGTCACTTGTCGAAACATTCTGACAAGCAGTACGAGGAAATGATGTCGCCGGCACGTGCGCCACCCAAACTGAAACCAATGGCGCCGTTGCCATCTGCAAGAAGCAGTTCTGATAAAGCGCAGAAAGTCGTCAACGGACCTTATAAGAACGGCGATCCGGCGCACAATCATGCTTGCGATCTATGTGGTATGATTTACAGATATCGACCCAATATGTTTAAGCATCGCGAATTCTGCATGCGGTTGCAGCCCGAGAATAGAACGTCGTACAAGTGCGTGCATTGTTCCATGACGTTCCTCGTGTTTAAGAAGTTCCATACTCACATCACAGTTGAtcacaaaaagaaagagtttACTTGCATCGTGTGCAATTCAAAATTCCGATCGCCCAGCGATTACTTGACTCATCACGAGAACCATCGCGCAGCGACACGCGGCAATCGTCAGATGCAGGAGGATACGTCACAGAACGAAGTTCAGATACCATTGAAGGAACGGAACCGAGGAGACGCCAAGTTGGCCAAGTCGAGAATTGGCGGTCAGAAATACAGTTGTGCGCTTTGCACTCAAGAATTCTCCACGAGATCTGAGTTAACGGAGCACCGAAATCTCCATCTCAAAGTGAAGATATACTCATGCGCCATTTGCCGCAGCATGTTTAGTAGCCCAGGAGCGTTAGAAATCCACATGAAAGATCATGGCATCGAGGACCCGAATGAACGAAACGCCAATATCTCTTGCGTAGAGTACGGTAGTTTAGATGAGGACGTGAGAATCGACGAGAAAGACTCGATGAATGCGAGTGCCATCTCGGATCCCGGTACGCAGATTCACGAGTGCGGCGAATGTGGTAAAGTGCTGTCAAATTATGCCAATCTTCGCCGACATACCAAGATTGCGCATCGGAACGCCAAGATCTACGATTGTGCCGAGTGCTCGCGGATGTTTACGCGTAAGGAGCTGTATGATCACCATATGCAGATCAAACATAACTCAAAGACGATGTTGCAATGTCCTCAATGTCCCAAGAGTTTTGTCTTCCAGTCGAACTTTACTTATCATTTTCGGACTGCCCATCTTGAGAAATCGCAAAACGGTTATGCATGCGACATCTGCGGCAAAGTATTCGTCGAGGAGGCATCTCTGAAAATACACAAGGGCTGGCATAATCGTGCCAACTCTCGTTTGAGCACACGATATATATTGAGCAATCAGAAGACACCTGATGATGAGTTGCAAATAGAGTCGGTCGGCGTCGAACCAGGCGAGAATTCGGAACGACCAGCAAGAGCACGAAAATCATTCCCCAATCCCCCGCTTCAATCACCGACAACTTCATCGGAGGGAAATTTTCAGTGCCAAGTATGCAATGATAAGTTCAACGATGTCACGGAGCTGAGAAATCATCTATGGGACGTACATTGCGCCCGCAACAAGCCGGAGAAGAATTTCTGCAACGATGAACTCCAGTGCGAGCTCTGTACGAATGTCTTTCCTGATCGGGAGACCTTGGCATCACACATGCGGTGGCATAAGGCCAATCCGATTCTCAGCGACATACGAAAGACGTATTCTTGCGATGTGTGCTGTAAGTCTTACAGCTCGAAGAAGGTCTTGTGGAAGCACAAAAAGCTACACAAGGCTACGGTCGTGGCATCGATCAAGTTTCAATCCTTAGCCAGGAAACCGATGGCCAGTCAATTTCTTTGCAACTTTTGTCGAAAGGTCTTCTCCAGCGGCCAATCGTTACAACGGCATAAGCTCAACTTTCATAGTGAGCTGCAGAACCCGCAACGAACGCAGCAACAATTGTACAATAGCAATCGTAAATTATCGTATGAGGATGAGCCGAGAACGAAGCGTATGAAGCTCGAGATCGATGACGATAATCCGCCTAAATTGCCGCCATTTGCTATGGATTTTGCTGGCGAGAGGAGAAAGTCGGTCATGTGCCACTTGTGTAAGAAGATGTTCTCAAATATGAGCGTGCTGTACAAGCATAAACAGACCGTGCATAAACATCGAGCAAGGAAGGATTTGATATTTGAGTGCATACCGATGCCGACTCAAGACGGCAAGTACTCGTGCAACATCTGCTTCAAGGAGTTCCCAGGCCTGTCAAATCTGCGACAGCACTTTACGATCAAGCACAAGAAAGGTTCGGAATCCGGCCATCCGTCGCCGAGCGGCGACACACTCTCCGAACGACCAACGAAGGAATCTGAGTCGCCGGCCCATAAAAGCATCATGTTCAGTTGCAAGCTCTGTAAACAGTGTCATGTCTTCAATAGGGAAGCGCTCATGAATCACATCACCACTGTGCACAACGCGGTATACCAAGCTGATAGCAGGACGTTTCATAGGGAGATCAATCTGGGCGCTTATGTAGTGAAGGGTGCGATCGGCGCTACGTGCCCACGATGCAACGTCAAGTATCCCAACAACCGGGCTCTAAAGATACATTACATTAAGTTCCATGAGAATGCTGATTAA
Protein Sequence: MEDEDVVEIGNVENVCRLCLSVDEPRFSVFAQDREEDSSGVPLAVKIQACLSIQISATDRLSTLICTNCVKNVNQWHTYKESCQRSQDKLQEWLATQSQPNPTVITIKDEPMDIDYEDNIEIISEITNNLDQQYSSAQTMENEETDNKEVQEIIDETDAEIDAKTDAETDARTDAKVDAHKEDDSETVPSATEMQLDKDQDQMGQQDSTVLRSIKIEPQDDDDTDCTIEVESANGSELLLNPMAVAAKEDTVMEADSTQKSNAASVPPKKKLRRGPHTHFRGTRVFKKKCTHCQIFLHSKHSYMNHMKRFHSKENNGIDNLESISQNDDEEMVEDLEDELVSMEKDSPLTQVQQEIISQLKTFSCYSCEQTFNDRRSTLSHIRQHLPDLRPYTCIACLTEFSDRSMYQLHCGASFECAMKIALVVPKHGNERYFTCNMCLRSMRDRKELLSHLSKHSDKQYEEMMSPARAPPKLKPMAPLPSARSSSDKAQKVVNGPYKNGDPAHNHACDLCGMIYRYRPNMFKHREFCMRLQPENRTSYKCVHCSMTFLVFKKFHTHITVDHKKKEFTCIVCNSKFRSPSDYLTHHENHRAATRGNRQMQEDTSQNEVQIPLKERNRGDAKLAKSRIGGQKYSCALCTQEFSTRSELTEHRNLHLKVKIYSCAICRSMFSSPGALEIHMKDHGIEDPNERNANISCVEYGSLDEDVRIDEKDSMNASAISDPGTQIHECGECGKVLSNYANLRRHTKIAHRNAKIYDCAECSRMFTRKELYDHHMQIKHNSKTMLQCPQCPKSFVFQSNFTYHFRTAHLEKSQNGYACDICGKVFVEEASLKIHKGWHNRANSRLSTRYILSNQKTPDDELQIESVGVEPGENSERPARARKSFPNPPLQSPTTSSEGNFQCQVCNDKFNDVTELRNHLWDVHCARNKPEKNFCNDELQCELCTNVFPDRETLASHMRWHKANPILSDIRKTYSCDVCCKSYSSKKVLWKHKKLHKATVVASIKFQSLARKPMASQFLCNFCRKVFSSGQSLQRHKLNFHSELQNPQRTQQQLYNSNRKLSYEDEPRTKRMKLEIDDDNPPKLPPFAMDFAGERRKSVMCHLCKKMFSNMSVLYKHKQTVHKHRARKDLIFECIPMPTQDGKYSCNICFKEFPGLSNLRQHFTIKHKKGSESGHPSPSGDTLSERPTKESESPAHKSIMFSCKLCKQCHVFNREALMNHITTVHNAVYQADSRTFHREINLGAYVVKGAIGATCPRCNVKYPNNRALKIHYIKFHENAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00110015;
90% Identity: iTF_01245407;
80% Identity: -