Chis007093.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cataglyphis hispanica
Gene Symbol
TFIP11
Assembly
GCA_004195275.1
Location
SGAY01007785.1:98-3665[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-99 2.2e-95 320.2 17.8 1 275 388 657 388 657 0.99
2 2 0.00058 8.8 6.6 0.1 243 274 670 701 663 702 0.90

Sequence Information

Coding Sequence
ATGTCTGAAGATGAAGTAGAAAGCTTTGAAATTACTGATTATGATTTAGACAACGAATTTAACATTAATCGTCCTCGACGCAAGCTTTCGAAGAAGCAACAAATGCTAgGAATATGGGCAGATGACAGCGATGAAGATGAATTATCTGCTAGACCATCTTTCAAGACTTACAACAAGGGTCCCAAAAATTATACAGCGCCAGTTAATTTTGTTGCTGGTGGTATCCAACAAGCAGGAAAACCAAAAGAGGAAGATAATGATGACAAGGAAGATGAAGAAGAGACAAGAGAATCTCAAACAAAACATTACAGTGATTCCAGctCAGAAGAGGAAAGACCAAGTAATATGAAATCACGTCCATCTTTCTCTTTGAAATTAGACAGCGACATTGCAGGTTTGCGTAAAAAACGCAACCAAGTAAATCCATTATTAATGAAAGGTGGAATGGGTAGTTGGGAAGTACATACAAAGGGTATTGGTGCTAAATTGTTATTACagatggGATTTGAACCTGGCAAAGGTTTAGGTAAACAGCTACAAGGAATAAGCACTCCAGTAGAAGCGCATCTCAGAAAGGGAAGAGGTGCTATTGGTGCTTATGGTCCAGAAAAGGTACCAAAAAttccagaaaaaaagaaagaggaggatGGAGAAGAAACAAAAGAGTCTAAAATATCTCAATGGCGAAAGGGCGAtaacagtaataaaaaaaaagttagataTTGTTATAGAAGTGTGGATCAAGTTTTGGAAGATGGAAAGTTGAAACCTAACAGAAAGCTCCCAATATCTAGTGATATAAGTAGAGTTAAAGTTATCGATATGACAGGGCCAGAGCAGAGAATTCTTAGCGGGTATCATGCGATAGCTGGTGGTCAGCAATGCCCTGATGAGAGTATACCTACAtctgataaaaaatctaaGGAGAATTTTGCTTTGCCCGAATTGcagcataatttaaatttacttgtGGATATGTGTGAGCAGGATATAATACAAAACGATCGACGAATGAGACATTTAAGTGACAGAGTAATTGCTTTAGAAGcggaaaataagaatttatcgaAAGTCGTCGATCAACATGGCCAATCAATTAATACCTTAGAGAATGTGCTCGAGATTGTGGGTAGGTTAATGAATGAAACGAATGAATTGTCTCTGCAAGAAATTGCGgaagcttttaaaaatttacaaaacaattattatgaaGAGTACAAAATGTACGAACTTAACGAATTGGCTAGTAGTTTTGTCGCgccaaaaataaaagattgctTGCTCAGTTGGAATCCACTCTTGCAACCAAAACAACcaaacaaattatttgaacAGTGGAAGTGTATTTTGGAGAATGGAATTAGTAATACTACACTTCAAACACGGACTATGCAGCCATACGATCAATTAGTGTGGAACGCGTGGATGCCATCGATTAGAGGAGCCATACAgCAGTGGACGTGTAGACAGCCTGACCCTCTGATTGAACTAATAGAACATTGGATGCCGTTATTGCCCAACTGGatcttagaaaatatattagatgtaTTAGTTTTACCAAAATTGACATTGGAGGTGGAGGAATGGAATCCTCTTACAGATACTGTACCCATCCATACATGGATTCATCCTTGGTTGCCATTATTACgAAATCGTTTGGATACTTCAATTTATCCAATAATACGCAGAAAGCTTGGATCTGCATTAGGAAGTTGGCATCCATCGGATAGATCCGCTAGATTAATGTTGCAACCTTGGGCAGAAGTATTTACCAAGGGAGATATGGAAGCGTTTTTAGTCAAAAACATTGTACCAAAATTACAAACAGCTTTAACACAATTTGTCATATATCCACATCAACAACATATGGATCCATGGAATTCGGTGTACGAGTGGAAGGAATTGATTCCTGTTCATATCATGGCAGGACTactcaataaatttttttttccaaagtgGTTGCAAACTTTGGCACTGTGGCTCGATCATTCGCCGAATTATGATCAAATTATAAACTGGTTTATGGGTTGGAAAAGCATATTAAGCGATAAGTTACTGGCGGAACCAACAATAAAAGATTATTTCAACAAGGCAATGGACATGATAGAGAGGACTGCCAGCGCATCACAAAATCATCAACCTGGCGTGTTGGagcatatatcatatttagcGAGCTTAGAAAGAACTCAATCGACAATACCGCCAATGCCATCAGTCGCGCAGCCGAGGATGGAgAGATTCGCAGAGGCAGGACAAACAGTAGCACAAAATTCGAAAAGTTTCAAAGATATTGTAcaagaaaaatgtgaaaaaagaggtatattatttatgaaaatcccAAATAGATATAAAGAAGGCAAACAAGTATACAAAGTGGGCAACATTCAGGCGTATATCGATGGTAATTTGTTGTTTGTTTCTCATAATGGTACGAATTGGATACCAACGCCTTTAAATGCCTTGCTAGATATGTCCGAACTTTAA
Protein Sequence
MSEDEVESFEITDYDLDNEFNINRPRRKLSKKQQMLGIWADDSDEDELSARPSFKTYNKGPKNYTAPVNFVAGGIQQAGKPKEEDNDDKEDEEETRESQTKHYSDSSSEEERPSNMKSRPSFSLKLDSDIAGLRKKRNQVNPLLMKGGMGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISTPVEAHLRKGRGAIGAYGPEKVPKIPEKKKEEDGEETKESKISQWRKGDNSNKKKVRYCYRSVDQVLEDGKLKPNRKLPISSDISRVKVIDMTGPEQRILSGYHAIAGGQQCPDESIPTSDKKSKENFALPELQHNLNLLVDMCEQDIIQNDRRMRHLSDRVIALEAENKNLSKVVDQHGQSINTLENVLEIVGRLMNETNELSLQEIAEAFKNLQNNYYEEYKMYELNELASSFVAPKIKDCLLSWNPLLQPKQPNKLFEQWKCILENGISNTTLQTRTMQPYDQLVWNAWMPSIRGAIQQWTCRQPDPLIELIEHWMPLLPNWILENILDVLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTSIYPIIRRKLGSALGSWHPSDRSARLMLQPWAEVFTKGDMEAFLVKNIVPKLQTALTQFVIYPHQQHMDPWNSVYEWKELIPVHIMAGLLNKFFFPKWLQTLALWLDHSPNYDQIINWFMGWKSILSDKLLAEPTIKDYFNKAMDMIERTASASQNHQPGVLEHISYLASLERTQSTIPPMPSVAQPRMERFAEAGQTVAQNSKSFKDIVQEKCEKRGILFMKIPNRYKEGKQVYKVGNIQAYIDGNLLFVSHNGTNWIPTPLNALLDMSEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00898736;
90% Identity
iTF_00280600;
80% Identity
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