Basic Information

Insect: Caradrina kadenii
Gene Symbol: -
Assembly: GCA_947462355.1
Location: OX381675.1:10725865-10735133[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 3.1 1.8e+02 3.0 0.9 1 23 54 77 54 77 0.94

2 21 0.084 4.8 7.9 4.1 1 23 84 107 84 107 0.97

3 21 4.9 2.8e+02 2.3 4.0 1 23 196 218 196 218 0.96

4 21 0.0017 0.096 13.2 1.0 2 23 224 245 223 245 0.97

5 21 2 1.2e+02 3.5 1.4 1 23 251 273 251 274 0.94

6 21 0.2 12 6.7 3.4 2 22 507 527 506 527 0.95

7 21 0.083 4.8 7.9 2.6 1 23 624 646 624 646 0.95

8 21 0.58 33 5.2 0.3 2 23 783 804 782 804 0.96

9 21 0.0011 0.064 13.8 0.5 2 23 885 906 884 906 0.96

10 21 0.13 7.4 7.3 0.3 1 23 914 936 914 936 0.97

11 21 4.9 2.8e+02 2.3 2.6 1 23 972 994 972 994 0.93

12 21 0.00023 0.013 15.9 4.0 1 23 1002 1024 1002 1024 0.99

13 21 1.5 84 4.0 2.2 1 23 1106 1128 1106 1128 0.97

14 21 0.039 2.2 8.9 0.6 1 23 1184 1206 1184 1206 0.97

15 21 2 1.1e+02 3.6 0.1 2 23 1213 1234 1212 1234 0.95

16 21 0.011 0.66 10.6 2.6 1 23 1300 1322 1300 1322 0.95

17 21 0.014 0.8 10.3 1.1 1 23 1328 1350 1328 1350 0.96

18 21 0.0065 0.38 11.4 2.6 1 23 1440 1462 1440 1462 0.97

19 21 0.00016 0.0094 16.4 1.4 1 23 1468 1490 1468 1490 0.99

20 21 0.33 19 6.0 2.8 1 23 1581 1603 1581 1603 0.96

21 21 0.0095 0.55 10.8 5.6 1 23 1614 1636 1614 1636 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	3.1	1.8e+02	3.0	0.9	1	23	54	77	54	77	0.94
2	21	0.084	4.8	7.9	4.1	1	23	84	107	84	107	0.97
3	21	4.9	2.8e+02	2.3	4.0	1	23	196	218	196	218	0.96
4	21	0.0017	0.096	13.2	1.0	2	23	224	245	223	245	0.97
5	21	2	1.2e+02	3.5	1.4	1	23	251	273	251	274	0.94
6	21	0.2	12	6.7	3.4	2	22	507	527	506	527	0.95
7	21	0.083	4.8	7.9	2.6	1	23	624	646	624	646	0.95
8	21	0.58	33	5.2	0.3	2	23	783	804	782	804	0.96
9	21	0.0011	0.064	13.8	0.5	2	23	885	906	884	906	0.96
10	21	0.13	7.4	7.3	0.3	1	23	914	936	914	936	0.97
11	21	4.9	2.8e+02	2.3	2.6	1	23	972	994	972	994	0.93
12	21	0.00023	0.013	15.9	4.0	1	23	1002	1024	1002	1024	0.99
13	21	1.5	84	4.0	2.2	1	23	1106	1128	1106	1128	0.97
14	21	0.039	2.2	8.9	0.6	1	23	1184	1206	1184	1206	0.97
15	21	2	1.1e+02	3.6	0.1	2	23	1213	1234	1212	1234	0.95
16	21	0.011	0.66	10.6	2.6	1	23	1300	1322	1300	1322	0.95
17	21	0.014	0.8	10.3	1.1	1	23	1328	1350	1328	1350	0.96
18	21	0.0065	0.38	11.4	2.6	1	23	1440	1462	1440	1462	0.97
19	21	0.00016	0.0094	16.4	1.4	1	23	1468	1490	1468	1490	0.99
20	21	0.33	19	6.0	2.8	1	23	1581	1603	1581	1603	0.96
21	21	0.0095	0.55	10.8	5.6	1	23	1614	1636	1614	1636	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCACAAGCCGGCGAGGTCGCGACTATCGTGCGCCACCTTGAAGGCCGAGTCTGCGGCGACGTGTCTTCGGAGGCTTCCTCTGATGCCGCCGAGGACTTTGAATTACCACAGTGCAAGATAAGGAGGAATTATAATTGCACCAAGTGCACGTTCTATACGCAGAATCCGCGCGCTTATCTCGTCCACACGCGTGACGCTCACTTCGTTAGACTCAAGATTTACGATTGTCCACACTGTGTTTATGCGTCGAGACACCATCAGAAACTTATAAGACACGTCAAAATGGTTCATGGAGGATCTAAGCCGACTTCTACAGCTGTTAAAGTGGATGCAGAGTTATCACCTCCCTCCTATGAAAACATGGAGCCAGCAGAGCGCATTGAAGACATGCTAGAGGAAGTGGAGGACTGCGAGGATATGATGATGGAAGTAGACGAGGACTCCATGGACCAGCCTGATGACATCGACGTCGACTGCGAGAGAAGTGTTGAGTATGCAGCTGATTCAATGCCCTTTTATAAGAGGGCGAATTTGGAAAAATCTAAGGGAAAATTCTTCTCATGCGATAAGTGCAACTATGTCACCCACATAAGAGCTAGATTCACAAAGCACGTAAAGTATCATTCGATGCCTATGATCAAGTGTACAATGTGCGATTTCCGAACACCATACAAATGGAACTTGGACCGTCACATGAAGAACCACGGTGGCAATGGAAGTTTCAATTGTTCGATGTGCAACTTCACTGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCATCACACACCGCCAGCGGGCCAATCGCTGTCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACACGGTTATCGCGGAGTTCGACGCAGCGAGCGCGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGGTCTCGGACATGGGTCTCCAATACGCGGAAAGAGAACTAGTCAGTTGCAAAAGTGATTCCAACGATGGTACAGCTTCTGACGCGATAAGCAGAAAAGAGACTTCGCAAGATGGATACAACCAGCTCTCACCAACCAACAGCTCAGACGAGAAACAACAAAAACAAAACAGAAAGGTTCCCAGGCCTATACCTCAACTCATTCCGTTAAACTCTTCAACACCTAATCAAAAACAAACATGCTCTGGTGAACCGCCACAGAAAAAGTTCAAGGAATCTCCACTCGCCGACATTGATGATGAATCTGCTGAAAATACTCTTTTAACAGTAAATCCATTAATAAAAGAGACTGCTGGTCGAAAGAAAAATGAATCGTTCTTCGACAGACTGAAAGAAAGACTTTTAACAGAAACAGGCGAAGAGGGCTCCCTCATATGCAAGATCTGTGGCTTCGAAAGCAAGTGCTTATCAGAACATTCCGTACACGAGAAGAACTGTTCCCCACACACGAACCGGATCAACGCAAACACGTCACTTAAAAGTCTAAGTTCAACTCGATGTCAAAATTGCAGACATAGGTGTAAATCTAGTGCAGACTTGTACATCCATATGCAAACATGCGGGAAGAGCGAAAATACGGAAGACGAGAACGCAATTAAAAATGAACATAGCAACGATGGAATCTATCCAATTCATGAAAAAGAAACGGAACCGCATCCAATGGAAAACGTCGTGTTCGTTTGGAACAACATTAATCACGACCCCAACAAGTTTGATATACCTTTAGACATTAACATAAATGATGATTCCACTCTACCAGAAGTACATCGAGGTTTTGATCCTGAGATTATTGATGACAATGAAAGCATGAATTTGTCGCCGAGTCAAGCCATTGGAAGGAAGGTATTTAAATGTCCACATTGTCCATTTTTCTCCACAACAGCGTCCAGATTTCACGTTCATATCGTGGGTCACTTGAACAAGAAACCGTTCGAGTGTTCCCTCTGCAAATATAAATCCAATTGGAGATGGGATATAACCAAACACATTAAACTGAAATCTGCGAGGGATCCTGAGCATAATGACGCAAAAGTACTTATGACTGATGAAACAGGAAGAAGAAACTATAGCAAATACAACAAATTCTTAGCAATGCCTGTTTTAAATGAAAATGGTGAAAATGAGTTTCATTACCTGGATCCTAATACTGCAGTCGATAGCACTATGGAAATGGATGAATCATTTAATGATATATCAGACGTTATGAATGTACAATTTGAAATGCAACCGCTTAACTTACAGACTCAACACGCTGAAGATAGTTACAACTATATTGATAACAGGAGCTTCAATGAAATGAAGAAACCGAAGAAGACATTATGGAAATGTAAAAAATGTAATTACAAAGATCCTTCAAAAGAAGCACTTTTGGAGCATGTTCGTGAACATTCCAGATCTGAGGGCATCCATCATGAGGAACCAAACAAACCACCTGCTAAGAAACCTGAAAATAACACTCCCGATCCAGCAGATCTGGCGTATCGCTGTGGACATTGTAATCAATTGTCTAATTGGAAACATGTCATCCAGCGCCATTGCCGATTAAAACACGATGGAGTGATCAAAGTGATAACTACAGTGAAACCAAAACCAGACCCACCAATGAACATCAATGACATCAACATTGATACTTGCAACAAATGCCCGTACAGAACGAGTGACAAGAAACTACTCATCGCACATTTGCAACAGCATCAGCCATCACCGAATTCTATTTTCAAGTGCTACTTCTGCCCCTTCTTCGTAAAGGATGAACCAGAATTGATCCAACATCTACTCCTGCACGGTATCACTGACCCAGAAGATTACATTGCAAAGGCAATGGGAACCAAATCCCCAGGACAAGAACCACCAGCACCTGCCCCTATGACATTGAACTCCACCAAACGACACAAATGCATAGAATGTCCATACGAAACCAATAGCAAATCACAATTCATGTACCACGAACAGTTCCATCGCCTCCCAGCGGATACACCTTATAAATGTCCAGAATGCAACTACAGCGTATCTAAGAGGCATCTACTGCACCAGCATCTGCGAGTACACGGAATAGCGACAAAGCGAATGGAAACTGAAGCCGAATTAGAAGCATCAACATCAAAGTTCGATCCGAAGATGGATTTCCAAATAAATCTCGATGAAATTCCATTTGTCTGGGTTTCAGCCAAGAATGAGTTCCATAAAATGTACAAATGCCGGTACTGTTCATACGTTAATTCTATAAAATGTAAAATACCAAATCACGAAAAAATTCATTGTATCGTATTCGAAAACAGTGATACAACTGTGTACAAGTGTTTGGAATGCAAATTCACATGTGATTTCGCTGGTAGGCTTGCCGAGCATTCCAAATCACATGGGGAAATATATGGTCGCATTTATTGCCCTGTTGAGCATGACGTGTCCGATGAAGAACAAATCACCAAATTGAGAAAGGTAATAGAAATTGAAAAATCAGCAAATCCAGAAAGTTTCTCTAGAGAGGATGGCCTTACGCATGAATTGAGAGAAATAAAAGTACTCTATTTTTGTCAAAAGTGCCCAGCAAGATTCTTTGAAGAGACCGAACTTAACGTTCATGAAAAAAGTCACGATGTCTCATTGCCCAATAAATGTAAAAGTTGTGACTTCTCAGTTACTGAAGTTAATGAATTAGCGGCGCATGCCACCGTGCACACAGATGAATATCACACAAAAACAAAGATGCTTAAATTTGTCCACCACTCACATCCCTCGCATAAACAGCCTGTGCTAGAACTTGTTCACTGTCCAACCACTTTTGAGATTTCGTGGATAGCTACTGGGCCACATAAAGCTGAGCATATTGAAAGTCCTACGAAAAAAACTAGTGATACAAAACACGCCAAACAATATTGTTGCAAACAATGTCCAGCTAAGTTTTTCAAAAATTCCGCGCTTACCTATCACATGGGACTACATGGAGGAGAAGGCGAGCATAAGTGCAAGAAATGTAGTTATGCCGTAAAGAACATTGGAAATCTGGCCAAACATGAATTACTTCACGAAAATGAAAACAAGGCTACAAGTTGTGACTATGAATCTGGTGAAGATATGGATTATAAAAATATCCCATTGTCAGGTACAGATTTGTTCCAGAGAAAGACTGAAGCTCAGAAAAGAGTTCTAACTGATAAAGATAAGTTAGTTAAGCCGAATGATCATTTTCCGCCTGTCTTACAAGCTGATCCACAATTCGGTTATTTAATGCATGGTAATCCCGAATTTATATATCCCACGTACCTGAAAAATGGACGTCAAAAAGAAAAACGATACAAATGCCATAAGTGCCCCTCAGCATTTGAGAAAAGAGAACAATATAAAATTCATTTATCATTACACGGTTCCAAGCAAAGATATAAATGTGAGTTATGTGATTATTCAGTAAAATATTACGCTAATTACGTGCAACATATGCGAAAACATCAAATGAACGATGAAGCTCAAGCTGAAAGAAAGAAAGATAACACTGATCTTATAGAATCTGAAAATCAAGAAGATATTAAGCTTGACGACAGTGATAACATTAAACTTGCAATCAAAACTATGCCGAAAGGAGGCGCTAAGAGCGACTTCCAACAATTCTCAATTAGCGACCAGCAAACGCTCAGATTACTGCAGAGGAGACGGTCAATAAATAATTCTGGAAAGGACCCTAACACTTCTGATACTTCGCCAATGAAGGAGCGCAAAATGCACATGTGCCTATTATGTCCCTATACTAATCAACGTCAAGATTCTTTAAATAATCATTACAGAAGGCATGGTGATCCCGATATAATGAACGGAGGAAGCCATAAATGTTCTCATTGCGACCTAGTGGTTGTTCAGTCACATTTCCTTCGGGAACACCTGAAGACACACTTCATCTACCACAAAACTCTAATTCCCGAATGTTTTGTAGCTAATGAAGCAGTTAGTTTTACTATCACCAAGATGGATGATGACAGTGAATCCGTTGATCTCAAATTAGAAATGCAAAACAAGAGTTTTGCGTGTAATGATGAAAAGATATTTGTAAAAATTAAAACTGGGGAGCTATTGGTGGAATAA
Protein Sequence: MLQQMSSPPSAQAGEVATIVRHLEGRVCGDVSSEASSDAAEDFELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDAHFVRLKIYDCPHCVYASRHHQKLIRHVKMVHGGSKPTSTAVKVDAELSPPSYENMEPAERIEDMLEEVEDCEDMMMEVDEDSMDQPDDIDVDCERSVEYAADSMPFYKRANLEKSKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGNGSFNCSMCNFTADIKQSLTVHEMNHHTPPAGQSLSSRRRNRVGASDTVIAEFDAASALLPKEEEGSGDSRSSHSVSDMGLQYAERELVSCKSDSNDGTASDAISRKETSQDGYNQLSPTNSSDEKQQKQNRKVPRPIPQLIPLNSSTPNQKQTCSGEPPQKKFKESPLADIDDESAENTLLTVNPLIKETAGRKKNESFFDRLKERLLTETGEEGSLICKICGFESKCLSEHSVHEKNCSPHTNRINANTSLKSLSSTRCQNCRHRCKSSADLYIHMQTCGKSENTEDENAIKNEHSNDGIYPIHEKETEPHPMENVVFVWNNINHDPNKFDIPLDININDDSTLPEVHRGFDPEIIDDNESMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPVLNENGENEFHYLDPNTAVDSTMEMDESFNDISDVMNVQFEMQPLNLQTQHAEDSYNYIDNRSFNEMKKPKKTLWKCKKCNYKDPSKEALLEHVREHSRSEGIHHEEPNKPPAKKPENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPPMNINDINIDTCNKCPYRTSDKKLLIAHLQQHQPSPNSIFKCYFCPFFVKDEPELIQHLLLHGITDPEDYIAKAMGTKSPGQEPPAPAPMTLNSTKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIATKRMETEAELEASTSKFDPKMDFQINLDEIPFVWVSAKNEFHKMYKCRYCSYVNSIKCKIPNHEKIHCIVFENSDTTVYKCLECKFTCDFAGRLAEHSKSHGEIYGRIYCPVEHDVSDEEQITKLRKVIEIEKSANPESFSREDGLTHELREIKVLYFCQKCPARFFEETELNVHEKSHDVSLPNKCKSCDFSVTEVNELAAHATVHTDEYHTKTKMLKFVHHSHPSHKQPVLELVHCPTTFEISWIATGPHKAEHIESPTKKTSDTKHAKQYCCKQCPAKFFKNSALTYHMGLHGGEGEHKCKKCSYAVKNIGNLAKHELLHENENKATSCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKDNTDLIESENQEDIKLDDSDNIKLAIKTMPKGGAKSDFQQFSISDQQTLRLLQRRRSINNSGKDPNTSDTSPMKERKMHMCLLCPYTNQRQDSLNNHYRRHGDPDIMNGGSHKCSHCDLVVVQSHFLREHLKTHFIYHKTLIPECFVANEAVSFTITKMDDDSESVDLKLEMQNKSFACNDEKIFVKIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01231174;
90% Identity: iTF_00726922;
80% Identity: -