Ckad016994.1
Basic Information
- Insect
- Caradrina kadenii
- Gene Symbol
- -
- Assembly
- GCA_947462355.1
- Location
- OX381702.1:1108458-1110794[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0014 2.2 8.4 0.9 18 43 9 31 5 32 0.93 2 21 0.021 33 4.7 0.6 18 44 37 60 33 60 0.77 3 21 0.00016 0.25 11.5 0.0 18 43 68 90 64 91 0.94 4 21 6.1e-05 0.094 12.8 1.8 17 44 98 122 95 122 0.91 5 21 0.0002 0.31 11.1 1.2 18 44 129 152 127 152 0.94 6 21 3.5e-05 0.054 13.6 1.6 15 43 157 182 154 183 0.89 7 21 0.0028 4.4 7.5 0.3 18 43 189 211 185 212 0.90 8 21 0.0044 6.8 6.8 0.7 18 44 220 243 214 243 0.91 9 21 3.6 5.6e+03 -2.5 0.1 35 44 269 278 267 278 0.90 10 21 0.15 2.3e+02 1.9 0.0 8 43 296 326 289 327 0.72 11 21 0.12 1.9e+02 2.2 0.1 14 27 359 372 354 386 0.81 12 21 0.014 22 5.2 4.6 16 43 405 429 397 430 0.87 13 21 5.9 9.1e+03 -3.2 9.4 9 29 427 447 421 459 0.69 14 21 0.00058 0.89 9.7 5.0 12 43 459 487 450 488 0.83 15 21 0.041 64 3.7 1.2 17 44 493 517 490 517 0.84 16 21 0.26 4e+02 1.2 1.0 18 28 524 534 520 547 0.82 17 21 5.1 7.9e+03 -3.0 0.4 21 43 557 576 554 577 0.59 18 21 5.1 7.9e+03 -3.0 0.5 14 28 580 594 573 596 0.78 19 21 3.2e-05 0.049 13.7 2.5 6 43 606 642 605 643 0.80 20 21 0.31 4.8e+02 0.9 0.2 15 40 660 687 652 690 0.85 21 21 0.15 2.4e+02 1.9 0.3 12 28 687 703 680 705 0.83
Sequence Information
- Coding Sequence
- ATGTATCAAAGTCAACTAGACTTTGTGTGTGACTACTGCTCAAGAACTTTTACAAGGAAATATAACTTACAGACACATATAGAGAACTGTCATATCAACGCATCATGTCATTGCAATATCTGCGGCCAAGATTTTGGCAGCCCCGCCGGGTTACTGCAACATTTATCTCGAGGCCACAACAACTACAATCAACCGTTCCCAGAATGTGAATTATGCGGACGGATTTTTACAAGAAAACAGAACATTATGTCTCATATGATAACTGTACATTTACAAGGACTTGGATATGATATACGTTGCCGGTTGTGCAAAAAAACGTTTACCACGGAACGGAATTTAAAGAGACATATCAATCAGTTACATAACCCCGATGTTGAATACCCGACGTGTAACGATTGTCATAAAGTTTTCAAAGGGAAACACTCCTTGATTGCCCACATTCAGTCCGTACACAACGTTACTGAAAGGGATGCTATCAAGTGCCATCTCTGTGAGAAAGTTTACACAAACAACAGGAACTTAAAACGACACATTGAAATGTTTCACGGTGTTAAAGGAGAATTTAGATGTGATATATGCCCTAAGGTTTACACTTCAAACCAGAGTTTGAGACGCCACGCAAGAACGAGACACGCAACCGACAACCAGGAGCAGTATTCGTGCAATTTTTGCTTGAAAGTGATAATAGGGAGAGTGAATTTCGACAGCCATCTCCAACACCATCACCAAGACACAGAAACAGACAGTAAAATGGCGGACTTTGTCTGCGAATCTTGCGACAAAGGCTTTGAAGATGAACCGTTGTTGCGACAACACGTAAAAACGGATCATTCATTTAAGATTTTCTACAAATATTGCAAGAATTCTTTGCTCAAGCAGTACGGAATGGACACGGAAAATAGTATATACACTTGTGAATTTTGTGACAATTCTTTCTTGACTGTTTACGAACTTAAGGACCATATGCGCGTTAATCATGACACTGAATATTCTCTATCTACATGCAATGTGTGCTTCGATAAATTCTACAGTAAAGAAACTATATTTGCGCACAAAAACGTATGTCTACCACCGGATAACGTGAACTCTTGCAGTCATTGCGATAAGCTATTCACCGATATTTCCAGCTTAGAATTTCACACGAGAATTTTTCATCCCCAAGCCCAAATTGCTGATTCCAACATCTCCTCAACAAACATTGATGAAGAAGTCTCTTTTAAGTGTAAACATTGCGATCGAATTTACTACAGCGATCGATCGCTCAAACATCACATAAAGTTGAAGCATACCACAGATGAGGAAGTGGAATGCGAATCTTGTGGAAAAATTTGCAGCAACAAATACTACTTGGCATCACACATAAAAATAGTCCATAATAATGATTCCTGGTCCCGCTGTGAATACTGTGATAAACAATTCAAATCTAAGAGGAATATTAGAAGACATATTGAGCACACACATCTGGGAATGCAACGGTACAAGTGTATCGAGTGCGAGACTTTGTTTAAAGAAAAACGAAGTTTGCGAAAACATGTTCGGACGAAGCACCCAGATTCGACGGCCTTCCCACAATGCCACATTTGTCATAAACGTTTTGAGTCAGCGAAATCTTGTAAGATACATCTCAAACTGCTGCATTCGTTCAATATGAATACGTTTCCATGCCATTTGTGTTCAGTTTCCTTTAGTTCAAATGAAGCCCTGAATATACATCTACAGAACAAACACTTAGCTGAAGACCAGATTTACAAATGCGAGGAATGCAATTTAGTCTTCAAGGGACAGGAGAAGTTCGACGCCCACAACGATGTTTGCCACGTGAATTTGGTCCCTAATATCAAGCAGAAAATTCTACCACGATGCATTCTGTGCATGAAAGATTTCAGTACAATAAAAACTTTGAAACGGCATATTAAGAAATTCCATGAAGAATTTGATGTAGATGAATTGGCGACGTTTGGTTCCAGACGGAGGACGTTCACTGTGGATTGTGAAAACTGTATCAAAAATTTTAATGACGACTTTCATCTAAATGTCTACAACAAGTTAAAACATTTGAGAGACTCCAAAGTTTTCAAGTGCGAACTTTGTTTGGAGTCGTACAGTTCTCTGGAATTCGCAATACAGAAGTACAAACTCACGAATGCCGAGGCTTGTAAAAGCAAGATGATTTTGAGCGAACTGTGCACAGCTGAAATGAGCGAGGAGGAGACTGATTTCTCTCACTTCGGCGCTTTACACGACATGTTACCTGAAAGTACAACGATGGACATAAAATTGGAACCTTTTGAAAACTTATTTGACAATGATATTAAGGTGGAACCGTCTTCGCCGTAA
- Protein Sequence
- MYQSQLDFVCDYCSRTFTRKYNLQTHIENCHINASCHCNICGQDFGSPAGLLQHLSRGHNNYNQPFPECELCGRIFTRKQNIMSHMITVHLQGLGYDIRCRLCKKTFTTERNLKRHINQLHNPDVEYPTCNDCHKVFKGKHSLIAHIQSVHNVTERDAIKCHLCEKVYTNNRNLKRHIEMFHGVKGEFRCDICPKVYTSNQSLRRHARTRHATDNQEQYSCNFCLKVIIGRVNFDSHLQHHHQDTETDSKMADFVCESCDKGFEDEPLLRQHVKTDHSFKIFYKYCKNSLLKQYGMDTENSIYTCEFCDNSFLTVYELKDHMRVNHDTEYSLSTCNVCFDKFYSKETIFAHKNVCLPPDNVNSCSHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNIDEEVSFKCKHCDRIYYSDRSLKHHIKLKHTTDEEVECESCGKICSNKYYLASHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEHTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPDSTAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTFPCHLCSVSFSSNEALNIHLQNKHLAEDQIYKCEECNLVFKGQEKFDAHNDVCHVNLVPNIKQKILPRCILCMKDFSTIKTLKRHIKKFHEEFDVDELATFGSRRRTFTVDCENCIKNFNDDFHLNVYNKLKHLRDSKVFKCELCLESYSSLEFAIQKYKLTNAEACKSKMILSELCTAEMSEEETDFSHFGALHDMLPESTTMDIKLEPFENLFDNDIKVEPSSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00447464;
- 90% Identity
- iTF_00273806; iTF_00274606; iTF_00273814; iTF_00810314; iTF_00809385; iTF_00177396;
- 80% Identity
- iTF_00274606;