Basic Information

Insect: Cantharis rufa
Gene Symbol: -
Assembly: GCA_947369205.1
Location: OX376307.1:3034715-3038343[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 5e-05 0.0067 17.9 0.1 3 23 782 802 781 802 0.98

2 10 0.95 1.3e+02 4.4 0.6 1 23 804 826 804 826 0.97

3 10 0.03 4 9.1 1.2 1 23 847 869 847 869 0.98

4 10 0.00095 0.13 13.9 5.0 1 23 875 897 875 897 0.99

5 10 1.3 1.7e+02 4.0 2.7 1 23 905 928 905 928 0.96

6 10 1.8e-05 0.0024 19.3 1.9 1 23 1037 1059 1037 1059 0.98

7 10 5.8e-05 0.0077 17.7 1.7 2 23 1067 1088 1066 1088 0.97

8 10 0.0038 0.5 12.0 4.0 1 23 1094 1116 1094 1116 0.98

9 10 0.00021 0.028 15.9 1.8 1 23 1122 1144 1122 1144 0.98

10 10 0.098 13 7.5 0.2 1 23 1150 1172 1150 1172 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	5e-05	0.0067	17.9	0.1	3	23	782	802	781	802	0.98
2	10	0.95	1.3e+02	4.4	0.6	1	23	804	826	804	826	0.97
3	10	0.03	4	9.1	1.2	1	23	847	869	847	869	0.98
4	10	0.00095	0.13	13.9	5.0	1	23	875	897	875	897	0.99
5	10	1.3	1.7e+02	4.0	2.7	1	23	905	928	905	928	0.96
6	10	1.8e-05	0.0024	19.3	1.9	1	23	1037	1059	1037	1059	0.98
7	10	5.8e-05	0.0077	17.7	1.7	2	23	1067	1088	1066	1088	0.97
8	10	0.0038	0.5	12.0	4.0	1	23	1094	1116	1094	1116	0.98
9	10	0.00021	0.028	15.9	1.8	1	23	1122	1144	1122	1144	0.98
10	10	0.098	13	7.5	0.2	1	23	1150	1172	1150	1172	0.97

Sequence Information

Coding Sequence: ATGAGTCAAGTTTGTAGAACGTGTTTAAAAATTGTAGAAAATAAGTCTCAAGTATTTAATATTGAAGTTAAAGAACCTACACATGACATTGTCCATATAAAAGCAAAATTAGAAGCATGTGTACCTGAAATCGTCTTAAATCGCGTGAAAAACTCTGTTATATGCAATTACTGCCTATGTGCTTTAAACACAGCATACGATTTTAAAACAAAATGTCTAGAGAGTGAGAAGAAAATTTATCATTTTGTTAAATATAGTACAAACGATGGTATAGACTTGAATAAATTTATTACAAAAATTGAGCCATACGATCAAAGCAATAATAATGTGGAATTATCATCCAGGCTTCCATTTGGTCAGACAGAACCAAATTTATCATTCAATTCATCCACACATTCGTTATCGAAAAGCTTCCAGTCGACACCATCTGCACTTTATCCAACAAACTTTGATGTCACATCGCAGCATTCACCTGCACCGGCTCCGACGTCGCCATTCTTTCATCAAGCACAAAATTATCCAGCAAACATCAACAGTACATTTCGAGTACCACCACAAGCTGTCTTCCAGACATCTCAGCCTTTCTCCTCTCATTATTCTTCGCAAAATGTACCTTCCCAACGGTCAAATGGATCATCTCCATCCATCCTCCATTCTACTCTGCTTAACAGGCCGCGACATCAATCCATGGATCCATACAATCCAACATATCATCCACGCTTTTCTAAAGCTAATCAATTCTCCTCATCAAATCAATCCAATTATCCTTTAGCAGTATTACAGCAGTTACCGCGCGCCCCATCGTCATTTAATTCTGATTCTTCCAACCAATTCCCATTTTATCCATATCCACCTTCGCTTAACAGACCTCTAAAACCCCCTTCTTCCATACGACAAAGATCGCCCATACAACAAAGATCTCCTTTTCCTATATTTAATTCCCCTCCAATGGCGGAAAATCAAAATGCAGCAGCTTTACATCAAAGTAATCCGCCATCTTTGCCTATACTTAATCCCCCATCTTTAGCTGAATTTCAATCCGCTCTGCAACCTTCTCAAGAACCCGAATCTCAGCAAAATTCATCAACAGCGCAGCCAGCCACACCCATACCTAATCCATCGCCACTAACCGAATTTAGTTCTCCACCCCCAGATATTAAACCGATACTTCCGTCATCTTCACCTAAAAATAATTCCACTTCGCCTAAAATTAATGTATCTCCAATTCTTCAGTCACCACCTCCAGTTGAATCTACTTTAATTGAACAGCCTTCAGTTCAACAAAATTTGATTCAACCTGTAATTCAACAACTCCCAGTTCATCACCCTTCATTTCAGCAAGATCTTCAAATTCAACCACCTGCTCAGCAAGTGCAACCGTCAAATATACCATCTTCACTTGCATCGCTTTTACTTCAACCATCCTTGGATCACTTATCTTCAAATCAACAGTCAAGTAATCAATCGTCAGTTTTCTCATCTTCAAATCAACCGCCTCCTCTTTTTCCATTATCAAATCAGTCACCTTCAATGCAACCACCTCAAGCATCTTCGATGCATCCCCTTCAACTATCTTCATTGCATCCAAATCGTAATTCTTTTACTCCACCTTCGCCATTTAATCGCCCTTCGAATTTCAATTCCGCCTTGCCAATGCAGGCAAACCTGGCAAGATTTAACCATCCTTCAGCTAAATTTAATTCATTATCTTCCACGAGGTTTACACCCCCACCATCTCATCATCCGTCTTCAGGAAAGTTCGATTCCACCCCACCACTCCACCAATCGTCGTTTAATTTTCCTCCGTCGGCCCATCATAATCAATCTTCCGAATTTAATTCCAATTCTTCCATGTACTCACCGTCATTTTACCCAATGTCCTACAACAACGCACCAGGACATCGTCCCTCAATGCCTTCCGGAGACTCATCGCCGATGTTCCATTCGAATCTATCTTTTCATCCAAACTTTGCGAATCGACCACATTTTTCTTCGATGCGCCCACCACCCATGTCGTCAATTCGTCCACACTTATCATCAATCCGCCCCCACCTATCGTCGATTCGCTCGTCGGTACCATCCCCGCCTCCTCAAAACCTACCGCCACTCTTCTTCCCACCCTCATCAACCGTCTCTTCGTTCCTACAAGCCATGCGACCTCCGCCTTCGCAAAATTCGTCATTCTTGCAACATCCCTCAATGTATCGCTTACCTCAACCTGGACCAAACGCCCAAATCCGCCTATTTAATCCAAACTTTTCCTCTCTCAACATGAACGGACTGCAAGATCCGGGAAGTCAACCAAACTTTTCACATCAAATGAACAAACCTCCAGTTTTGTTGTGTCCAATATGTGGAAGAAATTTTGTATCCAAAGAGCTTCTAGACCAACACATGACCATCCATACTTTTAAGTGCGACCCATGCAACTTCTTAACAACCTCAAACGAGAGTTACATTGAACATTTGTCGACCCACAAAACATGTGATAATGCAGATGCAAGTAACGAAAAACCACAAGAACCTATTGAACAGGTGTACAAATGCACTACTTGCAACTACAACACTCAGGATAAGGCTTCCTATGAAGAACACACCATTTCTCATAAATCTGAATATTTTTACAAGTGCCAATTGTGTACCTTCAAAACTATACACTCCTACAGCTTGAGGAGACACATGAAGGTGCACTCGACCGTTACAGATTCCATTTACAAATGTAACCAGTGCGCTTTCGACTGCGATAAGGATAATCTTTTGAAAGACCACATGATCAAGTTTCATTCTGAAAAGGTTTCGAATGCTGAGGCCGAAGAAGAACTCGTGCAAGTGGAGCCCTATCAGGTTTCCATCGACGATATCCAAAACATTTTTCAAGACGACCACGAGTCGAACGATGAAGGTGAGAAGGAGGAACTTCTCATGGAAAACGAAAATGAACTTATGGACGATTCCGATTCGTACATGATTACTGCTGCGGATTTAGAGAAGATTTTGAAGGAAGAACCGTCGGACGATCTGGAAAATGATGCGGCAGATTCGAAAAGTAAAAGTAACGATTTTGAATTGGGCCGCGAAGACGGCGGGGACTGCAGCGAAAAAAGTGTATTTAAGTGCTCGGTGTGTAATCAACCGTTTCAATTTAAGTATCAACTGAAGAAACACATGATAATTCATTCGGTCACGAAGAAAATATTGGAATGTAAAATGTGCGAATATCGGACAACCACGAAAAGTCATCTGCAAGTTCATATAGCCACTCATACAGGCGGAAAAATTTACAGATGTGACCAGTGTAGTTATTGTACGGTGTATTTTAGTAATCTAGAAAAGCACAACAGGGTGCATACTGGCGAGAAACCATACAAATGTGATTATTGTGATTATAGCGTAACAAAATTGTCACGATTGAAAAATCACTTAAACAATCACGCCAAACAAAAATTATACACTTGTAAAGAATGTTTTTATGAAGCGGATAGCGAAGAAAATTTACTGAGCCACAAAGAAATACACTCGATGGGCAAGCACTTTCTGGAGGATCCCGTTAGTGCCACAAGCAGTAACTTATCTTAA
Protein Sequence: MSQVCRTCLKIVENKSQVFNIEVKEPTHDIVHIKAKLEACVPEIVLNRVKNSVICNYCLCALNTAYDFKTKCLESEKKIYHFVKYSTNDGIDLNKFITKIEPYDQSNNNVELSSRLPFGQTEPNLSFNSSTHSLSKSFQSTPSALYPTNFDVTSQHSPAPAPTSPFFHQAQNYPANINSTFRVPPQAVFQTSQPFSSHYSSQNVPSQRSNGSSPSILHSTLLNRPRHQSMDPYNPTYHPRFSKANQFSSSNQSNYPLAVLQQLPRAPSSFNSDSSNQFPFYPYPPSLNRPLKPPSSIRQRSPIQQRSPFPIFNSPPMAENQNAAALHQSNPPSLPILNPPSLAEFQSALQPSQEPESQQNSSTAQPATPIPNPSPLTEFSSPPPDIKPILPSSSPKNNSTSPKINVSPILQSPPPVESTLIEQPSVQQNLIQPVIQQLPVHHPSFQQDLQIQPPAQQVQPSNIPSSLASLLLQPSLDHLSSNQQSSNQSSVFSSSNQPPPLFPLSNQSPSMQPPQASSMHPLQLSSLHPNRNSFTPPSPFNRPSNFNSALPMQANLARFNHPSAKFNSLSSTRFTPPPSHHPSSGKFDSTPPLHQSSFNFPPSAHHNQSSEFNSNSSMYSPSFYPMSYNNAPGHRPSMPSGDSSPMFHSNLSFHPNFANRPHFSSMRPPPMSSIRPHLSSIRPHLSSIRSSVPSPPPQNLPPLFFPPSSTVSSFLQAMRPPPSQNSSFLQHPSMYRLPQPGPNAQIRLFNPNFSSLNMNGLQDPGSQPNFSHQMNKPPVLLCPICGRNFVSKELLDQHMTIHTFKCDPCNFLTTSNESYIEHLSTHKTCDNADASNEKPQEPIEQVYKCTTCNYNTQDKASYEEHTISHKSEYFYKCQLCTFKTIHSYSLRRHMKVHSTVTDSIYKCNQCAFDCDKDNLLKDHMIKFHSEKVSNAEAEEELVQVEPYQVSIDDIQNIFQDDHESNDEGEKEELLMENENELMDDSDSYMITAADLEKILKEEPSDDLENDAADSKSKSNDFELGREDGGDCSEKSVFKCSVCNQPFQFKYQLKKHMIIHSVTKKILECKMCEYRTTTKSHLQVHIATHTGGKIYRCDQCSYCTVYFSNLEKHNRVHTGEKPYKCDYCDYSVTKLSRLKNHLNNHAKQKLYTCKECFYEADSEENLLSHKEIHSMGKHFLEDPVSATSSNLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00269172; iTF_00270484; iTF_00271933; iTF_01292979; iTF_01294435;
90% Identity: iTF_00269172;
80% Identity: -