Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:37148792-37156465[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0067 9.4 7.2 0.1 20 45 90 115 80 121 0.83

2 20 0.085 1.2e+02 3.7 0.0 21 45 147 171 143 174 0.91

3 20 0.00016 0.23 12.4 0.2 21 52 175 206 171 207 0.84

4 20 0.83 1.2e+03 0.5 0.1 23 45 205 227 201 233 0.71

5 20 0.01 14 6.7 0.1 22 46 316 340 292 345 0.85

6 20 0.74 1.1e+03 0.7 0.3 22 33 448 459 434 474 0.66

7 20 0.02 29 5.7 0.4 21 47 475 501 467 509 0.80

8 20 4.2 6e+03 -1.8 0.0 21 31 531 541 518 556 0.80

9 20 0.34 4.8e+02 1.7 0.0 21 45 588 612 581 619 0.80

10 20 0.0034 4.9 8.1 0.0 18 52 801 836 794 838 0.83

11 20 0.19 2.7e+02 2.5 0.5 22 46 834 858 831 864 0.75

12 20 0.058 81 4.2 0.0 21 47 861 887 857 892 0.74

13 20 0.36 5e+02 1.7 0.2 21 44 889 912 885 916 0.83

14 20 0.89 1.3e+03 0.4 0.4 25 46 921 942 914 951 0.70

15 20 1.4 2e+03 -0.2 0.1 23 44 947 968 941 972 0.86

16 20 0.0019 2.6 9.0 0.3 21 47 973 999 959 1006 0.82

17 20 0.9 1.3e+03 0.4 0.1 22 44 1002 1024 997 1032 0.80

18 20 0.7 9.9e+02 0.7 0.1 21 36 1029 1045 1025 1056 0.70

19 20 0.0096 14 6.7 0.5 21 46 1057 1082 1039 1089 0.79

20 20 0.73 1e+03 0.7 0.0 21 45 1085 1109 1081 1112 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0067	9.4	7.2	0.1	20	45	90	115	80	121	0.83
2	20	0.085	1.2e+02	3.7	0.0	21	45	147	171	143	174	0.91
3	20	0.00016	0.23	12.4	0.2	21	52	175	206	171	207	0.84
4	20	0.83	1.2e+03	0.5	0.1	23	45	205	227	201	233	0.71
5	20	0.01	14	6.7	0.1	22	46	316	340	292	345	0.85
6	20	0.74	1.1e+03	0.7	0.3	22	33	448	459	434	474	0.66
7	20	0.02	29	5.7	0.4	21	47	475	501	467	509	0.80
8	20	4.2	6e+03	-1.8	0.0	21	31	531	541	518	556	0.80
9	20	0.34	4.8e+02	1.7	0.0	21	45	588	612	581	619	0.80
10	20	0.0034	4.9	8.1	0.0	18	52	801	836	794	838	0.83
11	20	0.19	2.7e+02	2.5	0.5	22	46	834	858	831	864	0.75
12	20	0.058	81	4.2	0.0	21	47	861	887	857	892	0.74
13	20	0.36	5e+02	1.7	0.2	21	44	889	912	885	916	0.83
14	20	0.89	1.3e+03	0.4	0.4	25	46	921	942	914	951	0.70
15	20	1.4	2e+03	-0.2	0.1	23	44	947	968	941	972	0.86
16	20	0.0019	2.6	9.0	0.3	21	47	973	999	959	1006	0.82
17	20	0.9	1.3e+03	0.4	0.1	22	44	1002	1024	997	1032	0.80
18	20	0.7	9.9e+02	0.7	0.1	21	36	1029	1045	1025	1056	0.70
19	20	0.0096	14	6.7	0.5	21	46	1057	1082	1039	1089	0.79
20	20	0.73	1e+03	0.7	0.0	21	45	1085	1109	1081	1112	0.84

Sequence Information

Coding Sequence: ATGAAGATTTTACCCCTTCAACGACCAAAATATGACTTAATATGTGGCAACGAGCAGCATACAGATGACAAGTGTAGCTGTCTATTGTTCCGATTTCTGCAAGCGGCTATTACACTAACAAAATGTTTGTTACAGGAAGCTCGATGCTATTCCAGTAACTTTCCTCAAATTAAGACAGAAGAATTAGAAATCAAGTTGGAAGATTTGCATCATTCCATCGACATTAAGGAAGAGAGCCCCATTCGAGAATGTCGACCCGAAGGCGAATCGAGCGAGAAGCCGTTTaagtgtgaaatttgtgattttcaaagtGTACGTAAAAGCCATCTGAAAAGGCATTTAAAAACTCACACTGGTGAAAAATCGTATGCGTGTAAACTTTGCGATTACAAATGTGCCTATCTGGGAAATCTAAATCTTCACGTAAGAATCCATACTGGCGAAAAGCCGTTTGGCTGTGAGATTTGTGGTCACAAATTTGCCCTAAGTGGAAATCTCAAGAGTCATTTAAAGACTCATACAGGCGAGCGGCCCTTTACGTGTGATATTTGTGGTTATACCTGCATCCGTAAAAGAGATTTAAAACGCCATTTTGTAATTCATACGGGTACCAAACCGTTTACTTGTAAGAtatgtgattataaatgtgcACGGAAGGACGACATGCGGGATCACGGAGAATATCATTGCAACGAGAAGCAGTTTTCGTGTGATACTTgtaaatctaaatttgtacataaaaagAGTCTACTCAGGCATATGAGGAGATATATCTGTGAAAAACGGTATGCGTGTGAACTTTGCGATTACAAAAGTACCAAGCCGGGAATGCTAAATATTCACATAAGAAAGCATACTGGCGAAAAGCAGTTTGGCTGTGAGATTTGTGGACAAAAATTTGCCCGAAGGGGAAATTTCACGAATCATTTAAAGACCCATACAGGCGAACGGTCCTTTACGTGTCATATTTGTGATTATACCTGCACCCGTAAAAGTGATTTAAAACGGCATTTAAGTATTCATACTGCGGACAAGCGTTTGGCTATAAATGTGCAcaaaagCTGTCTATTGTTCCGAGTGCTGCAAGCGGCTATTACACTAACAAAATGTTTGTTACAGGAAACTCCATGctattccagtaatttccctCAAATTAAGATAGAAGAAATAGAAATCAAGTTGGAAGATTTGCATCATTCCATCGACATTAAGGAAGAGAGCTCCGTTCGAGAATATCGACCGGATGGCGATTCGAGCGGGAAGCCGTTCaagtgtgaaatttgtgacttTCGAAGTGCATACAAAGGCTGTTTGAAAACCCATTTAAGAACTCATTGTGACGATAAACCTTTCACGTGCGAAATTTGTGACTACAAATGTTCCCGCAAAGGAGATTTAACGATTCATTTGAGATACCATGcgggcgagaaaccgttcagttgcaaaatttgtaattataaatgtgTACGTGAAGGCCATCTGAAGAggcatttaaaaactcatacCGGAGAAAAACCGTTTGCCTGTGATTTTTGCGACTATAAATGTTCGGATACCTGTCGGTTGAAACAGCACGTGAGAACTCATACGGGCGAAAAACCGTTTGGATGTAGTATTTGCGATCATAAATCTTCAACGAAACAGCAGTTGGTGGTGCATATGAAAATTCATACTGgagaaaaattgtttgaatgtaaattttgcgATCACAAATATTCGACCAAACATCTGTTGGTCGTGCACAACATGAGAAATCATACCGGAGAGAAACCGTACGCCTGTGCAATCTGTGAATATAAAAGCGCAGTCAAGTATGATTTGAAACGACATATAAAAACGCATTACAAGGATACTCCACCGCATTCAGATGGCTGTCCGCAGATTAAGGTAGAAGAAGAAACAATCGAATTCAAGTTGGAAGATTTGCATCATTCCGTTCACATCAAAGAAGAGTTTCCGTTACTGGACTCTCTGTCGGTTAGAGAATGCAAACCACTGTCGGGTGAGAATCTGAGTACTTGTAAAGCTTACGACTACGAACCCAACGTAAACGAAAATTCGAAAGCTGAACCCGTCAAGAAACGGTTTATGTGTTCACTCTGCGAGCGGCCATTCGCACAAAAGGAGCACTTGAAGATGCATATCAGGACCCATACGGGCGAAAAACCTTTTGGATGTGAATtatgtgattttaaatttactaataaagACAGCTTGAAGGAACATATCAAAATTCATACCGGGGAAACTCCATTCCATTCGAATAACTTCACCGAAGTTAAGATCGAAGAAATAGAAGAGCCAGAGGAAGAAGTAGAAATCAAGTTGGAAGATTTGCatcattccattgatattaaagaagaGATTGTAATTCTAGAACCTCAACCGGCTAAAGATAGCAAAGCACAAGGAAGCGGGGAACCATTTACATGCAATATTTGTAACTTTAAATGTGGACTTATGAGGATTTTAAACAggcatttaaaaatccattccGGTCAGAAACCATTTGCGTGTGATATCTGCGAATACAGATGTGCACGCCTAGGAGGCCTTCGACGTCATTTACGAGCTCACACTGGCGAGAAGCCGTTTCAATGcacaatttgcaatttcaaattcgTTGAACAAAGCGATTTAAGAAGTCACCTCAAAACTCAcaccggggaaaaaccgtttaGTTGtgaaatttgcgattataaatgtgctCGTAAGAGATCTTTGAAGAGTCACATAATAAGTCACACGGGAGAGAAATTGTTCATGTGTGAAATATGCGGCTACAAATGTGCACGACAAGGAAGTTTAAATCGCcatttaagaactcatacCGGATACAAACCCTTTACGTGTGAGCTCTGCGAGTTGAAGTTTGCCCGACCAGCTGATCTGAAACGGCATGTAAGAACTCACACCGGTGAAAAACCGTATACATGTgaaatttgcgattttaaatgtgCAGATCGGAGCAATTTAAGAAGTCACTTGAGAACCCATACGGGCAAGAAGCCATTTACCTGTGAGCTTTGCGACTACGTGTGTGCTCGTAAAGgaggtttaaaaattcatttgatAAGCCACACGAACGAAAAACCCTTCACGTGTGatgtttgtgattataaatctGCAAAGCAAGGTTGTctgaaaattcatttaaggACTCATACGGGTGACAAGCCCTTtacgtgtgaaatttgtgactataaatgtGCACGACAGGTATATTTAAAACGGCATCTAAGAACTCAtaccggggaaaaaccgttcTCGTGCGAGATGTGCGGCTTTAAATGTGCAGATCagagtaatttaaaaagccATTTAAGAACTCACGCAGGCGAACAACAGTTCAAGAGTGAAACGAAAACCTCTTGA
Protein Sequence: MKILPLQRPKYDLICGNEQHTDDKCSCLLFRFLQAAITLTKCLLQEARCYSSNFPQIKTEELEIKLEDLHHSIDIKEESPIRECRPEGESSEKPFKCEICDFQSVRKSHLKRHLKTHTGEKSYACKLCDYKCAYLGNLNLHVRIHTGEKPFGCEICGHKFALSGNLKSHLKTHTGERPFTCDICGYTCIRKRDLKRHFVIHTGTKPFTCKICDYKCARKDDMRDHGEYHCNEKQFSCDTCKSKFVHKKSLLRHMRRYICEKRYACELCDYKSTKPGMLNIHIRKHTGEKQFGCEICGQKFARRGNFTNHLKTHTGERSFTCHICDYTCTRKSDLKRHLSIHTADKRLAINVHKSCLLFRVLQAAITLTKCLLQETPCYSSNFPQIKIEEIEIKLEDLHHSIDIKEESSVREYRPDGDSSGKPFKCEICDFRSAYKGCLKTHLRTHCDDKPFTCEICDYKCSRKGDLTIHLRYHAGEKPFSCKICNYKCVREGHLKRHLKTHTGEKPFACDFCDYKCSDTCRLKQHVRTHTGEKPFGCSICDHKSSTKQQLVVHMKIHTGEKLFECKFCDHKYSTKHLLVVHNMRNHTGEKPYACAICEYKSAVKYDLKRHIKTHYKDTPPHSDGCPQIKVEEETIEFKLEDLHHSVHIKEEFPLLDSLSVRECKPLSGENLSTCKAYDYEPNVNENSKAEPVKKRFMCSLCERPFAQKEHLKMHIRTHTGEKPFGCELCDFKFTNKDSLKEHIKIHTGETPFHSNNFTEVKIEEIEEPEEEVEIKLEDLHHSIDIKEEIVILEPQPAKDSKAQGSGEPFTCNICNFKCGLMRILNRHLKIHSGQKPFACDICEYRCARLGGLRRHLRAHTGEKPFQCTICNFKFVEQSDLRSHLKTHTGEKPFSCEICDYKCARKRSLKSHIISHTGEKLFMCEICGYKCARQGSLNRHLRTHTGYKPFTCELCELKFARPADLKRHVRTHTGEKPYTCEICDFKCADRSNLRSHLRTHTGKKPFTCELCDYVCARKGGLKIHLISHTNEKPFTCDVCDYKSAKQGCLKIHLRTHTGDKPFTCEICDYKCARQVYLKRHLRTHTGEKPFSCEMCGFKCADQSNLKSHLRTHAGEQQFKSETKTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00270107;
90% Identity: iTF_00270107;
80% Identity: iTF_00270107;