Clat022635.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cantharis lateralis
Gene Symbol
-
Assembly
GCA_963170105.1
Location
OY720628.1:37148792-37156465[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 4.2e-05 0.0022 19.1 4.2 1 23 95 117 95 117 0.99
2 29 0.0014 0.07 14.4 0.8 1 23 123 145 123 145 0.98
3 29 0.00014 0.0074 17.4 1.1 3 23 153 173 151 173 0.98
4 29 0.00019 0.0097 17.1 2.4 1 23 179 201 179 201 0.95
5 29 0.0074 0.38 12.1 2.3 1 23 207 229 207 229 0.94
6 29 0.0026 0.13 13.5 3.3 1 22 235 256 235 256 0.96
7 29 0.0006 0.031 15.5 0.2 1 23 263 285 263 285 0.98
8 29 1.1e-05 0.00057 20.9 0.8 3 23 293 313 291 313 0.98
9 29 1.2e-05 0.00061 20.9 5.9 1 23 319 341 319 341 0.98
10 29 0.0013 0.065 14.5 3.4 1 23 423 445 423 445 0.99
11 29 3e-05 0.0016 19.6 2.5 1 23 451 473 451 473 0.98
12 29 0.00029 0.015 16.5 6.2 1 23 479 501 479 501 0.98
13 29 0.2 10 7.5 6.2 1 23 507 529 507 529 0.97
14 29 0.0018 0.096 13.9 1.4 3 23 537 557 535 557 0.98
15 29 0.038 2 9.8 5.2 1 23 563 586 563 586 0.95
16 29 0.00062 0.032 15.4 0.3 1 23 592 614 592 614 0.98
17 29 7.1e-06 0.00037 21.5 1.7 1 23 696 718 696 718 0.98
18 29 6.2e-05 0.0032 18.6 0.7 3 23 726 746 724 746 0.98
19 29 4.8 2.5e+02 3.2 2.4 1 23 809 831 809 831 0.89
20 29 0.00071 0.037 15.3 0.5 1 23 837 859 837 859 0.97
21 29 1.2e-05 0.00062 20.8 1.7 1 23 865 887 865 887 0.99
22 29 0.00022 0.011 16.9 2.4 1 23 893 915 893 915 0.98
23 29 3.2e-06 0.00017 22.6 1.8 1 23 921 943 921 943 0.98
24 29 5.6e-06 0.00029 21.9 0.3 1 23 949 971 949 971 0.99
25 29 8.5e-06 0.00044 21.3 2.7 1 23 977 999 977 999 0.99
26 29 0.00031 0.016 16.4 0.5 1 23 1005 1027 1005 1027 0.98
27 29 0.00095 0.049 14.9 2.0 1 23 1033 1055 1033 1055 0.99
28 29 1.5e-05 0.0008 20.5 3.3 1 23 1061 1083 1061 1083 0.99
29 29 1e-05 0.00053 21.1 2.7 1 23 1089 1111 1089 1111 0.98

Sequence Information

Coding Sequence
ATGAAGATTTTACCCCTTCAACGACCAAAATATGACTTAATATGTGGCAACGAGCAGCATACAGATGACAAGTGTAGCTGTCTATTGTTCCGATTTCTGCAAGCGGCTATTACACTAACAAAATGTTTGTTACAGGAAGCTCGATGCTATTCCAGTAACTTTCCTCAAATTAAGACAGAAGAATTAGAAATCAAGTTGGAAGATTTGCATCATTCCATCGACATTAAGGAAGAGAGCCCCATTCGAGAATGTCGACCCGAAGGCGAATCGAGCGAGAAGCCGTTTaagtgtgaaatttgtgattttcaaagtGTACGTAAAAGCCATCTGAAAAGGCATTTAAAAACTCACACTGGTGAAAAATCGTATGCGTGTAAACTTTGCGATTACAAATGTGCCTATCTGGGAAATCTAAATCTTCACGTAAGAATCCATACTGGCGAAAAGCCGTTTGGCTGTGAGATTTGTGGTCACAAATTTGCCCTAAGTGGAAATCTCAAGAGTCATTTAAAGACTCATACAGGCGAGCGGCCCTTTACGTGTGATATTTGTGGTTATACCTGCATCCGTAAAAGAGATTTAAAACGCCATTTTGTAATTCATACGGGTACCAAACCGTTTACTTGTAAGAtatgtgattataaatgtgcACGGAAGGACGACATGCGGGATCACGGAGAATATCATTGCAACGAGAAGCAGTTTTCGTGTGATACTTgtaaatctaaatttgtacataaaaagAGTCTACTCAGGCATATGAGGAGATATATCTGTGAAAAACGGTATGCGTGTGAACTTTGCGATTACAAAAGTACCAAGCCGGGAATGCTAAATATTCACATAAGAAAGCATACTGGCGAAAAGCAGTTTGGCTGTGAGATTTGTGGACAAAAATTTGCCCGAAGGGGAAATTTCACGAATCATTTAAAGACCCATACAGGCGAACGGTCCTTTACGTGTCATATTTGTGATTATACCTGCACCCGTAAAAGTGATTTAAAACGGCATTTAAGTATTCATACTGCGGACAAGCGTTTGGCTATAAATGTGCAcaaaagCTGTCTATTGTTCCGAGTGCTGCAAGCGGCTATTACACTAACAAAATGTTTGTTACAGGAAACTCCATGctattccagtaatttccctCAAATTAAGATAGAAGAAATAGAAATCAAGTTGGAAGATTTGCATCATTCCATCGACATTAAGGAAGAGAGCTCCGTTCGAGAATATCGACCGGATGGCGATTCGAGCGGGAAGCCGTTCaagtgtgaaatttgtgacttTCGAAGTGCATACAAAGGCTGTTTGAAAACCCATTTAAGAACTCATTGTGACGATAAACCTTTCACGTGCGAAATTTGTGACTACAAATGTTCCCGCAAAGGAGATTTAACGATTCATTTGAGATACCATGcgggcgagaaaccgttcagttgcaaaatttgtaattataaatgtgTACGTGAAGGCCATCTGAAGAggcatttaaaaactcatacCGGAGAAAAACCGTTTGCCTGTGATTTTTGCGACTATAAATGTTCGGATACCTGTCGGTTGAAACAGCACGTGAGAACTCATACGGGCGAAAAACCGTTTGGATGTAGTATTTGCGATCATAAATCTTCAACGAAACAGCAGTTGGTGGTGCATATGAAAATTCATACTGgagaaaaattgtttgaatgtaaattttgcgATCACAAATATTCGACCAAACATCTGTTGGTCGTGCACAACATGAGAAATCATACCGGAGAGAAACCGTACGCCTGTGCAATCTGTGAATATAAAAGCGCAGTCAAGTATGATTTGAAACGACATATAAAAACGCATTACAAGGATACTCCACCGCATTCAGATGGCTGTCCGCAGATTAAGGTAGAAGAAGAAACAATCGAATTCAAGTTGGAAGATTTGCATCATTCCGTTCACATCAAAGAAGAGTTTCCGTTACTGGACTCTCTGTCGGTTAGAGAATGCAAACCACTGTCGGGTGAGAATCTGAGTACTTGTAAAGCTTACGACTACGAACCCAACGTAAACGAAAATTCGAAAGCTGAACCCGTCAAGAAACGGTTTATGTGTTCACTCTGCGAGCGGCCATTCGCACAAAAGGAGCACTTGAAGATGCATATCAGGACCCATACGGGCGAAAAACCTTTTGGATGTGAATtatgtgattttaaatttactaataaagACAGCTTGAAGGAACATATCAAAATTCATACCGGGGAAACTCCATTCCATTCGAATAACTTCACCGAAGTTAAGATCGAAGAAATAGAAGAGCCAGAGGAAGAAGTAGAAATCAAGTTGGAAGATTTGCatcattccattgatattaaagaagaGATTGTAATTCTAGAACCTCAACCGGCTAAAGATAGCAAAGCACAAGGAAGCGGGGAACCATTTACATGCAATATTTGTAACTTTAAATGTGGACTTATGAGGATTTTAAACAggcatttaaaaatccattccGGTCAGAAACCATTTGCGTGTGATATCTGCGAATACAGATGTGCACGCCTAGGAGGCCTTCGACGTCATTTACGAGCTCACACTGGCGAGAAGCCGTTTCAATGcacaatttgcaatttcaaattcgTTGAACAAAGCGATTTAAGAAGTCACCTCAAAACTCAcaccggggaaaaaccgtttaGTTGtgaaatttgcgattataaatgtgctCGTAAGAGATCTTTGAAGAGTCACATAATAAGTCACACGGGAGAGAAATTGTTCATGTGTGAAATATGCGGCTACAAATGTGCACGACAAGGAAGTTTAAATCGCcatttaagaactcatacCGGATACAAACCCTTTACGTGTGAGCTCTGCGAGTTGAAGTTTGCCCGACCAGCTGATCTGAAACGGCATGTAAGAACTCACACCGGTGAAAAACCGTATACATGTgaaatttgcgattttaaatgtgCAGATCGGAGCAATTTAAGAAGTCACTTGAGAACCCATACGGGCAAGAAGCCATTTACCTGTGAGCTTTGCGACTACGTGTGTGCTCGTAAAGgaggtttaaaaattcatttgatAAGCCACACGAACGAAAAACCCTTCACGTGTGatgtttgtgattataaatctGCAAAGCAAGGTTGTctgaaaattcatttaaggACTCATACGGGTGACAAGCCCTTtacgtgtgaaatttgtgactataaatgtGCACGACAGGTATATTTAAAACGGCATCTAAGAACTCAtaccggggaaaaaccgttcTCGTGCGAGATGTGCGGCTTTAAATGTGCAGATCagagtaatttaaaaagccATTTAAGAACTCACGCAGGCGAACAACAGTTCAAGAGTGAAACGAAAACCTCTTGA
Protein Sequence
MKILPLQRPKYDLICGNEQHTDDKCSCLLFRFLQAAITLTKCLLQEARCYSSNFPQIKTEELEIKLEDLHHSIDIKEESPIRECRPEGESSEKPFKCEICDFQSVRKSHLKRHLKTHTGEKSYACKLCDYKCAYLGNLNLHVRIHTGEKPFGCEICGHKFALSGNLKSHLKTHTGERPFTCDICGYTCIRKRDLKRHFVIHTGTKPFTCKICDYKCARKDDMRDHGEYHCNEKQFSCDTCKSKFVHKKSLLRHMRRYICEKRYACELCDYKSTKPGMLNIHIRKHTGEKQFGCEICGQKFARRGNFTNHLKTHTGERSFTCHICDYTCTRKSDLKRHLSIHTADKRLAINVHKSCLLFRVLQAAITLTKCLLQETPCYSSNFPQIKIEEIEIKLEDLHHSIDIKEESSVREYRPDGDSSGKPFKCEICDFRSAYKGCLKTHLRTHCDDKPFTCEICDYKCSRKGDLTIHLRYHAGEKPFSCKICNYKCVREGHLKRHLKTHTGEKPFACDFCDYKCSDTCRLKQHVRTHTGEKPFGCSICDHKSSTKQQLVVHMKIHTGEKLFECKFCDHKYSTKHLLVVHNMRNHTGEKPYACAICEYKSAVKYDLKRHIKTHYKDTPPHSDGCPQIKVEEETIEFKLEDLHHSVHIKEEFPLLDSLSVRECKPLSGENLSTCKAYDYEPNVNENSKAEPVKKRFMCSLCERPFAQKEHLKMHIRTHTGEKPFGCELCDFKFTNKDSLKEHIKIHTGETPFHSNNFTEVKIEEIEEPEEEVEIKLEDLHHSIDIKEEIVILEPQPAKDSKAQGSGEPFTCNICNFKCGLMRILNRHLKIHSGQKPFACDICEYRCARLGGLRRHLRAHTGEKPFQCTICNFKFVEQSDLRSHLKTHTGEKPFSCEICDYKCARKRSLKSHIISHTGEKLFMCEICGYKCARQGSLNRHLRTHTGYKPFTCELCELKFARPADLKRHVRTHTGEKPYTCEICDFKCADRSNLRSHLRTHTGKKPFTCELCDYVCARKGGLKIHLISHTNEKPFTCDVCDYKSAKQGCLKIHLRTHTGDKPFTCEICDYKCARQVYLKRHLRTHTGEKPFSCEMCGFKCADQSNLKSHLRTHAGEQQFKSETKTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00270694;
90% Identity
iTF_00270694;
80% Identity
iTF_00270694;