Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720624.1:5609417-5612309[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 7.2e-05 0.0038 18.4 2.9 3 23 174 194 173 194 0.97

2 12 9.6e-05 0.005 18.0 1.4 1 23 200 222 200 222 0.98

3 12 1e-05 0.00054 21.0 1.4 2 23 272 293 271 293 0.97

4 12 1.4e-07 7e-06 27.0 3.4 1 23 304 326 304 326 0.99

5 12 0.00012 0.0062 17.7 1.6 1 23 332 354 332 354 0.94

6 12 1.1e-07 5.6e-06 27.3 1.2 1 23 360 382 360 382 0.98

7 12 1.2e-05 0.00064 20.8 0.4 1 23 388 410 388 410 0.95

8 12 0.00039 0.02 16.1 0.2 3 23 418 438 416 438 0.96

9 12 3.6e-06 0.00019 22.5 2.9 1 23 444 466 444 466 0.98

10 12 0.00035 0.018 16.2 0.7 1 23 472 494 472 494 0.99

11 12 1.5e-06 7.6e-05 23.7 0.7 1 23 500 522 500 522 0.98

12 12 4.2e-07 2.2e-05 25.4 0.5 1 23 528 550 528 550 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	7.2e-05	0.0038	18.4	2.9	3	23	174	194	173	194	0.97
2	12	9.6e-05	0.005	18.0	1.4	1	23	200	222	200	222	0.98
3	12	1e-05	0.00054	21.0	1.4	2	23	272	293	271	293	0.97
4	12	1.4e-07	7e-06	27.0	3.4	1	23	304	326	304	326	0.99
5	12	0.00012	0.0062	17.7	1.6	1	23	332	354	332	354	0.94
6	12	1.1e-07	5.6e-06	27.3	1.2	1	23	360	382	360	382	0.98
7	12	1.2e-05	0.00064	20.8	0.4	1	23	388	410	388	410	0.95
8	12	0.00039	0.02	16.1	0.2	3	23	418	438	416	438	0.96
9	12	3.6e-06	0.00019	22.5	2.9	1	23	444	466	444	466	0.98
10	12	0.00035	0.018	16.2	0.7	1	23	472	494	472	494	0.99
11	12	1.5e-06	7.6e-05	23.7	0.7	1	23	500	522	500	522	0.98
12	12	4.2e-07	2.2e-05	25.4	0.5	1	23	528	550	528	550	0.98

Sequence Information

Coding Sequence: atggaagaaAATTCATTAACGAATGTGTGTCGGGCTTGTATGACAGAGCAAGGTGAGTTCCAATCAGTTTTCGTTACTGACGAAAACAGTGGTTTGACCATTCATTTGGCTGAGATGATAATGGCGTATGCGTCTGTTCAAATCACATTGGGAGACGGGCTACCCGAACAAATTTGTACATCTTGTGCGGAGAAAgctgtaaatttgtatttgtttaaattgtgtTGTGAGGAATCGGATACTTCTTTTCGGCAACGTTTGGGTAAATCACCGTTGAACAAGATGTACAGCATAACCGAAGAGATGCTGGCGGCCGAGAAGCTCGAAAGGGAGGCTTTCATTAGCAGGTTGATTAAACCCGAAGTTAGTATCGAAGAAATTAAAGATGAATCGGATAACGATTTTTCAAACATTGAAATTGTGGGTGCAGATGATTTGGATACGTCGCTGGAGGATTGTACTCAGTTGGAGGTGGAAGAACCCGAAGTAAAAAACGACACGATGAAACAACAAGCATTTTGTGATATCTGTAATAAGGGATTTTATCGTGTGAGCCATTTAAATcgtcataaaaaaattcacctTCCTCGTAAAATGTACCACTGCGACGTTTGTCAGAAAGCTTTCACCAGAAATGATATCTTGATTCGTCACTTAAGCACCCACGATAGCAAAGATTCAAACTCGgcttatgaaattttaaaagaaatcaaaaacgAGGATCAAAATACTTCGTTTGAAAGTATTTTAGACGAGGAGGGCATGGTGGAGActttaattgaaatcaaagCCGAGGAAGAAGGTGACAACTTGAAGTGTTCGGAATGTTACAAGACGTTTCAAAATAAAGACGATTTGAATTCCCACATGCAGCTTCAcgaaattaaactaaaaggGACTCCAGGAAATTATAAGTGCCcaaattgcaacaaaaaatttagcaaaCCTTCCCACCTGACGCGACATGTAAAAATTCACGCAGAAGTTAAACCATTTTTGTGCAAGTTGTGCCACAAGGGATTTGCCCGTAGCGAACAATTAAGTAATCACTTGAATGCACACACTGGAGTGAAACCGCACACTTGTGGAATCTGCGGTaaaggtttCAATCAAATATCCAACCTGAAAGATCACATGAGAACTCACAATGGTGAAAAACCGTACCTCTGTTCTGTCTGTGGAAAAGGCTTCAATCAATTAGGTAATCTGCGACAACACACCATCCGACACACGGGAGTTAAAGCTCACCTGTGCAGCATTTGCGGAAATGGGTTTGCCAGCAAAGGAGAACTGGGTGCCCATTTACGAAAACATacagGTGCAAGACCGTTCGTGTGttcaatttgcaatcatgGTTTTACCACGTCGAGTTCTCTAACGAAACACAAACGTATCCACTCGGGAGAAAAACCCTATGAATGTGAAGTGTGTAGAATGCGGTTTTCTAGATCTGGTATTTTAGCTCGCCACAAGCGCACTCACACGGGTGAAAAACCCTACGTTTGCCAATATTGCTCAAAAGCCTTCTCTCAGTCGAACGACCTTAGTTCACATCTGCGTATACACACCGGTGAGAAGCCATACATTTGTGATATTTGTGGACAAGCCTTTAGGCAAAGTTCGGCTTtaaaaacacataaaaaaaCTCATATAGATCGTTCCTCGATTTTAGAAATTGAGAGATCGAGAAATTTTGTTCCCATGATTCACAATTCGTTTGTGAATGTTTTACCATGA
Protein Sequence: MEENSLTNVCRACMTEQGEFQSVFVTDENSGLTIHLAEMIMAYASVQITLGDGLPEQICTSCAEKAVNLYLFKLCCEESDTSFRQRLGKSPLNKMYSITEEMLAAEKLEREAFISRLIKPEVSIEEIKDESDNDFSNIEIVGADDLDTSLEDCTQLEVEEPEVKNDTMKQQAFCDICNKGFYRVSHLNRHKKIHLPRKMYHCDVCQKAFTRNDILIRHLSTHDSKDSNSAYEILKEIKNEDQNTSFESILDEEGMVETLIEIKAEEEGDNLKCSECYKTFQNKDDLNSHMQLHEIKLKGTPGNYKCPNCNKKFSKPSHLTRHVKIHAEVKPFLCKLCHKGFARSEQLSNHLNAHTGVKPHTCGICGKGFNQISNLKDHMRTHNGEKPYLCSVCGKGFNQLGNLRQHTIRHTGVKAHLCSICGNGFASKGELGAHLRKHTGARPFVCSICNHGFTTSSSLTKHKRIHSGEKPYECEVCRMRFSRSGILARHKRTHTGEKPYVCQYCSKAFSQSNDLSSHLRIHTGEKPYICDICGQAFRQSSALKTHKKTHIDRSSILEIERSRNFVPMIHNSFVNVLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01292068;
90% Identity: iTF_01292068;
80% Identity: iTF_00270702;