Ccap006167.1
Basic Information
- Insect
- Campoplex capitator
- Gene Symbol
- -
- Assembly
- GCA_037576405.1
- Location
- JARBWI010000010.1:7002724-7017768[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.8e-08 0.0009 19.0 1.0 48 149 19 118 13 129 0.69 2 3 0.51 1.2e+04 -4.5 22.3 456 485 165 194 142 206 0.70 3 3 1.3e-08 0.00031 20.5 0.6 321 381 231 292 214 305 0.83
Sequence Information
- Coding Sequence
- ATGGTGTGCGACTTCGAAGGTGAGGTAAATCCGGACGCTCAGGATCGCACAACGCTTCAGATACAATCGAAACTGGGGGATTATACCCTCGTGAAGCATTTGCTCGACGAGCCCAAGCGTTTGATCGGGATCGAGGGCATACCGGCTAGTCCAGCGCCCGCGGGCGCTTCCACTCCTAGAATACCCTCGGTCACCAACACATGCAGAAGTTCACCGTCGTCCCAAGAGTTCAAGAAGCCCGGAAGCGGACCTCGCTCATCGTCAGGCTCGAACTCATCTTCCTCAGCTAGTAACACCAACACCGGTACAACTACCAATACAAATTCCTCGACAATCTCGAGTCACGCGTCACAAAGAGGTGGATTCGTAAAACCCGCCGATGGTAAACCTCCTTACGGCGGTAGAGGTGGATATCCTGGCCTACCGGTCAAACACGGTGGCAACAGCAACGATCATCGGAGCCACGGAATTCTTCCGGCCAAGGGACCacctctttcttcttcttcttcttcttcttcttcttcttcattgtccacctcctcctcctcctcctcttcaaCCACCACCTCTTCGTCAACTACGAATCCTCATACGGGAACAACGGGTTCGAGCGGTAGTCTCGTGACTTCCGGTAACGGCTCTTCAACCGTTACAAACACCAGCTCCGGTACTCCTGTTAACTCCAACAGAATACACTCGGCAGCTTCCAGATTATCGAGGCTACCCCTCGACAATGGTACGGTTTCTCGACACGGTATTAACGAGAATTCGGCCGATTTGGAACACATTCTGAAGGAAATGACGATGCCGCCCACACCACTCACGGCCATAGCTCAGACGCCGAGAAAAGAGCTCGAATCCAAGTTCACTTTCAATCCGGTACTGGCTaagcTGACCGAGGTGCCATCGGTCGAACCATCGAAGCCACCACCTCCTCCTCcacGTAAATTAGGCTCATTCGATGAATGCGCCGTTCAGAGCCAAAAGGCTTCTTGA
- Protein Sequence
- MVCDFEGEVNPDAQDRTTLQIQSKLGDYTLVKHLLDEPKRLIGIEGIPASPAPAGASTPRIPSVTNTCRSSPSSQEFKKPGSGPRSSSGSNSSSSASNTNTGTTTNTNSSTISSHASQRGGFVKPADGKPPYGGRGGYPGLPVKHGGNSNDHRSHGILPAKGPPLSSSSSSSSSSSLSTSSSSSSSTTTSSSTTNPHTGTTGSSGSLVTSGNGSSTVTNTSSGTPVNSNRIHSAASRLSRLPLDNGTVSRHGINENSADLEHILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPSVEPSKPPPPPPRKLGSFDECAVQSQKAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01508853;
- 90% Identity
- iTF_01508853;
- 80% Identity
- -