Cflo000091.1
Basic Information
- Insect
- Camponotus floridanus
- Gene Symbol
- Hr39
- Assembly
- GCA_003227725.1
- Location
- NW:146011-168529[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.76 2.3e+03 -2.9 7.3 131 174 43 86 15 113 0.49 2 6 3.7 1.1e+04 -5.2 11.4 51 164 283 396 239 442 0.65 3 6 4 1.2e+04 -7.1 8.7 81 137 426 502 402 539 0.40 4 6 7.6e-08 0.00023 20.1 0.0 1 21 608 628 608 636 0.92 5 6 0.57 1.7e+03 -2.5 0.0 88 113 666 691 639 701 0.72 6 6 3.4e-70 1e-66 225.5 0.0 197 408 795 1001 746 1001 0.93
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGACCAGGGCCTGGTTCGGATTCAGGCTGGTGGTCGGCCACACAGACCTGGAAatcatcgtcgtcatcgtcgtcgtcggcggtggcggcggcgacCTCATCTTCAACTTCCACTTCAGCAGCAGGTTCTGCGTCCGTTTCGGTTTCCTGCGTCACGTCCAGTTCGTCCCCGACGAGTTCCTCCACCTCGACCAACACATCCGCGACCTGTTGCCCCTTGCCTTGCGTCGGTGTATCGATGAGCCCGAGCCGTTCCACGGAGACGGGGAAAAACGTGTCTGTCACCACTATTAACGTACCGCCCAATCAAGAAATGCACGATGGTAAAGGAGTGTGTAAATATCTCGGAGGACAGAACGGTGTGACGGTGTCGGTGGTATCGACCTCGATGCTGGGATGCGGAAACACCGTCCCGACGAGTGGAATCTGCGCGAATACGGGTCCGCATAGTATCGGAATCGGCGGTATCCTCGCCGCGAACGCGGCCGACATCGACGATCCCGAAGACAGCGATGGTGAAATCAGCAAGATTGACTTTAGAGGCGTCAATCTGCGCTCGAAGAAGAAACGCGACGTGTCGGGTAATCAGAACGGTGACAAGATCGGCGACGGGGATGCGAATGGCGATGGCGCGGGATGCTGCGATAATTCGCAACAGCAGCCCGAGAGGCCGATGTCGTGGGAGGGAGAACTGTCGGACCAAGAAATGTCTTCCAATACAATTACTAATCAGgaCCATAACGAGGAAACCTCCATGGAGGGAGTTCAAGTGTGCAGTACGAGTCCTGGACCCATGGAACAGAAATTTCCGATTAAGTCAGAGCCAGATTTTCGATCCAGTCCGGCTTTCACAATAGGATCCTTTCACGACGCTGGACTACCTATGACACACAACCAACAACTacaacagcagcaacagcaacaacGCGGTATCGAAAATCTCGAGCAGACACAACAGAGCGATTTACCGCTTCTCGTGGGCAAGCTTTTAGGTGGATACAATAATTCCACGCCTAATCATAGCCCTATTCTCAATCCACGACATCATCTAACCAAGCACAGTCATACTAGATCACAGGTACCGTCACCAGATTCCGCCGTTCATTCCGCATACAGCGTCTTCAGTTCACCGACACAAAGTCCTCACGCGGCGCGGCACTCCGCTCTAGGTGCGGGCAGCCCGATACCGTCCTCGTCATTATCCCTCTCTCGACACAGCTTCAACAATTCGACCTCCTCGCTATCCCTATCGCTGTCACATTCGCTGTCAAGGAATAACTCGGACGCTTCCAGTAGTTGTTATAGTTATGGCTCGCTTAGTCCGCCTACACATTCACCCGTCCAGCAGCCGAGACATTCGCATTCGCACTCGCAACATCATCAGCATCAAGTGGCGCAAGGTAGCCCGTTGCATCTTCCAACAGCCTCGTCTGCTGTCGCCGCGCATCATTATTCATCCTCTTCAGTGCCAGGCTCGGAACTGTCACCGGACGGCCACGCGGTCGTAGAGGATCAGGAAGACTGTAGAATACCTTCAGCGCCGTCAGGTATTTCCACCAGACAGCAACTGATAAATAGTCCCTGTCCGATTTGCGGTGACAAGATAAGCGGATTTCATTACGGTATCTTCTCCTGTGAGTCGTGCAAGGGATTCTTCAAGCGTACCGTCCAGAATCGCAAGAACTATGTGTGCCTTAGAGGCGCAGCTTGTCCGGTCACCGTGGCCACGAGGAAAAAATGCCCGGCCTGCCGCTTCGACAAGTGCCTCAACATGGGTATGAAGCTCGAGGCGATCAGGGAGGATCGTACCAGAGGTGGTAGAAGTACGTATCAGTGCACCTATACTCTACCGGCGAATCTTGTCGGCAGTCCCGCCGGCGGTATGGCCGGCAGCGAAAAACTGACGGCAGCGGGCAATTGCAGCCCGGCACCGGCCGGAAGCGAGCACCATTACTCGGTCAGATATCACTCGAATCATTCGCATAAAATGCAAGTGCCGCAACTCTTGCAAGATATCATGGATGTGGAGCATCTTTGGCATTATAACGATAATGATCGAGTAAGCGGGGGAATGTCCGGGAATGTGAGAAACATCTCTGTTAGCGGTGACAATAATATGCAATGTGGATTCGGAAGTGGCCCATCGGCACCCGGCGGAACTGCGAGTGTTATTGGCACCGGAAATAACGGAGGCGCGGTGGAATGTTCGTCGAACGATTCGAGCAATGTCGATACTAACAACAGAAGAGGAGAGTCGGGTAGTCCCGCCGGCTCGGCTTCCACAAGGGCGCCCGATGAACATTCCACGAACGGCAATACCGTGAATAATGGCAATTCTCAAATCGCCAGTAATTCCAATAATGGCAATCCGACGCAACATCCGGATTTTCTGTCTAACTTGTGCAACATCGCAGACCACCGGCTCTATAAAATTGTCAAATGGTGCAAGAGTCTGCCGTTATTCAAGAATATCTCGATCGACGACCAAATTTGTTTATTGATCAACTCTTGGTGCGAATTACTACTCTTCTCCTGCTGTTTTCGTAGCATGAATAGTCCCGGTGAGATCAGAGTGTCTCTTGGCAAGTCGATCACTCTGGCACAAGCTAAAGAACTTGGTTTAGCGAATTGCATCGAAAGAATGCTTGCTTTTACCAATAATCTGCGAAGGCTAAGAGTAGATCAATACGAATATGTTGCAATGAAGGTGATCGTACTGTTAACGTCCGACATAAGCGAATTAAAGGAACCTGAAAAAGTCAGAGCTTCTCAGGAAAAAGCCCTTCACGCATTGCAGCAATACACAATTGCGAAATATCCAGAAATGCCTGCCAAATTCGGTGAACTATTATTGAGAATTCCAGATTTACAAAGAACATGTCAAGCAGGAAAAGAACTACTCAGTGCAAAACGCGCCGAGGGAGAAGGCAGCtcctttaatcttttaatggAATTGTTAAGAGGAGATCACTGA
- Protein Sequence
- MSEQNGPSEGPGPGPGSDSGWWSATQTWKSSSSSSSSAVAAATSSSTSTSAAGSASVSVSCVTSSSSPTSSSTSTNTSATCCPLPCVGVSMSPSRSTETGKNVSVTTINVPPNQEMHDGKGVCKYLGGQNGVTVSVVSTSMLGCGNTVPTSGICANTGPHSIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKIGDGDANGDGAGCCDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPAFTIGSFHDAGLPMTHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAVHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHSHSQHHQHQVAQGSPLHLPTASSAVAAHHYSSSSVPGSELSPDGHAVVEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMAGSEKLTAAGNCSPAPAGSEHHYSVRYHSNHSHKMQVPQLLQDIMDVEHLWHYNDNDRVSGGMSGNVRNISVSGDNNMQCGFGSGPSAPGGTASVIGTGNNGGAVECSSNDSSNVDTNNRRGESGSPAGSASTRAPDEHSTNGNTVNNGNSQIASNSNNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMNSPGEIRVSLGKSITLAQAKELGLANCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDISELKEPEKVRASQEKALHALQQYTIAKYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01267641;
- 90% Identity
- iTF_00885153;
- 80% Identity
- iTF_00265027;