Cflo009544.1
Basic Information
- Insect
- Camponotus floridanus
- Gene Symbol
- Ssb-c31a
- Assembly
- GCA_003227725.1
- Location
- NW:2141850-2144005[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.31 3.7e+03 -3.0 1.6 28 37 28 37 20 37 0.72 2 2 2.3e-27 2.7e-23 80.6 0.4 1 52 47 99 47 99 0.96
Sequence Information
- Coding Sequence
- ATGCCAAAATCAAAGGAATATGTTTCCGATAGCGATGACAGTAGCGAGGagGAAGTAAAGTCAAGTAAAAAGAAACGAGAGGATAAACAAGAAGACAAACCAGCAAAAAAGGCAAAAAAGGAGAATGAGGAAACTATTTGGGATTTGGGAAGCAATCGCCAAGTGAATGTGAGAGATTTCAAGGGCAAATATTATGTAGATATCCGAGAAATGTATTATGACAAAGAAGGTGATTTAAAACCTACCAAAAAAGgaaTATGCTTATCTATGCAACAATGGCGAAAATTTATGGATATTGTGGAAGAGGTAGATAAAGTTGCGAAAAATAAGTGTTAG
- Protein Sequence
- MPKSKEYVSDSDDSSEEEVKSSKKKREDKQEDKPAKKAKKENEETIWDLGSNRQVNVRDFKGKYYVDIREMYYDKEGDLKPTKKGICLSMQQWRKFMDIVEEVDKVAKNKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00729314;
- 90% Identity
- iTF_00264281;
- 80% Identity
- -