Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_003227725.1
Location
NW:402284-414921[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.29 3.4e+03 -2.9 2.0 61 91 127 157 101 225 0.52
2 5 0.024 2.9e+02 0.6 0.0 125 142 272 289 232 305 0.77
3 5 2.8e-100 3.3e-96 320.8 9.9 1 218 743 955 743 955 0.92
4 5 0.59 7.1e+03 -3.9 0.0 28 50 1093 1115 1081 1124 0.76
5 5 0.058 7e+02 -0.6 0.5 60 87 1182 1209 1174 1239 0.45

Sequence Information

Coding Sequence
ATGTACCACCCTCCCCATCTTCGGCATCTCCGGACTGGCCCTCTTCCCATCCCCTTTCTCTCTTGCGGAAGATTCCGGGAACAAGAGCGACATAAACGTATGGAAGAAACACCCGAGATGGAATCGCCTTCGGCCCGTCAGGACTGTCTCGTTGAGGCCCAAGAGGATTCCACCTCAGTGGAGCCTGAAGCGAAAAGCGTATTATTATCTCCAAGCAAGACGATGGCGACGATGACAATAGCAACGACGCCAGCAACAGAAATTGAGGACAACGCACGAGATTCTGTTGAAAATTCGATCTGTGAGAAACTGGACAGAGGATTGGAAAACCAAGAATCCCAAGAGAGACAATTGAGTGATTATCCTTGCCTCCGGAAATcggaggaagagaaagaaaatgaacTTAAAGTTGGAAAGTTGGAAAAGGAGACTAGCGAAAGcgggaaaaattttgaagttgATATTGATGTAGAATCGACGAAAGATTCTCTTCAAGAACCTGAAGAATCTTCGAAGGGGCCTGATTCTCAGAATTGGAACAAAGATGAAGAGGACAGAATCGAAAAGAAGAGATCGTCCGGGGGCGATTTTCTGCCGATCGGCGCAGAGATCAGAAGGGTTGGCGTCGAGATCTCGGAAGAGGAGGTGACCCAAATGAGAAACGACGTCAGAAGATTGTCACCAGTGTTAGTGAGTTTACGAGAGCGAACCTTGGGCGAGGTTTTCCTGTCGTCGCAGTCCTGCCTTTTCGGGGACGAGGTTGATGACAAGACAGCGTCGCGGAATAATGCCAACTCGCAAGAATCATTTGGAAAGAACGATTCCGGAATTCAGGATATCGATCAAAGTGAAAAGCGGGATGTTGACGAGGAAGAAACGGTCATTAAGATCAACGCAAGTCTCTCAGATTGCACAAACAGCAAGTTAAATCATGAGGAGGAGACGCTCGACGTTGACATAACTTCTTTGGTTCCCTCTAGGCTAGAGAATTCAGACAGAACGAGTCAGGATGACATCAAGGACACGAATGTAATTGCGACTATCGAGACCACATCCTGCACGCCGACCAAGAAGGAAGCGCTATCAAGTCCCTGTCGACATTTATCGGTAGTGCTGAACCGCATCAAGGAGGGAGACACAAAAAACGATACACTGACAGATGAAAATATCAATGAGAATACTTGGAACATCGAGGGAAGTTCTCCGTGTCCCAAAAGAAGAAGAGATTCCGTTGAAGAAGAGTGCGATTCGTCTTCAGAGATTTCGAAAACCAAGGAGAGAAGTTCGAAAAAACCACGGTTGCAAATTAACTCCTCTCCGATGACGAGATCAAAGAAGTGCGAATTGACAGATAGTCAAAGTCCAGATCGCAATCTGATACTAAAAAAGTGCAAAGTTGTGCTGGAGCGAATCAGAAGTGAATTCGAACAATCTCAAGAGGAAGAATCCCACGTCGAGGAACTCGAAGCGAAAAGGCCCGAGAGAGAGGAACTCGCGCCCGTGGCAGTGATAGGCAAGCTGGAGGAGGATGAGGAAGTGGTACTGACGAGCTCATCGCCTTCGGGTGAGAATAATCGCGCTTTTAACGAATTGGATTCCTTGGAGACGACGCCGAGCTCGCCGGAAGAAGGAGAGACGCCGGAAGAAACATCGGTCGACGTCGGCGCCGAGGGTGTCGACACCGAGACGGAAACCGAGACCGGCTCCGACAGCTCGGAGATATCGCCCATGACAAACATCCGGGAACTACGCGACGTCGACATGGCGTCCGACCATCAGCTGCCCTGTTCCGAAGAAGGACCGCTGTGCTGCGTGGAAACGATGGCGCCGATCATGACGAGACTGGAGGCCGAACGACCGGAAGCATACACGGAGGACTCTGCCGAGAGCCTGACATTGGCTACCGGTGCCAGAGACGAAGTTAGATCCGATGGGAGTGATTCCGGTTTAGGGAATGAGATTTCCGGTGATCCTGGACCGGCACCCGCACCGGAAAGCGACTCGGAGACCTCTTTTCTTGACAGACTGCCGGACGACATCCTCTCTGACAAGGAGAAAGgCGTGAACCAACTAGATGGCTTCGCGCCGTCTTCGAGCACGTCTGAGACCCCGGGCCAGGCACCCCTAACAAGCTTCCGGACACTTCCGCCCAAGAGCAATTTGAAGCGCAGGTTGACCGACTGCATGGAGGGCGATGAGTCGCGAAGCAACCCCGATGAGCCCGTGAAAAAGAAGCGCAACATTCAGTTCGATGCAGTGACAGTCTATTACTTCCCCAGGACGCAGGGCTTCACCTGCGTACCTTCCCAAgGCGGCAGCACCCTGGGCATGAGCgccacgcacacacacgccgAGAGATTTTCGTTGTCGGAACACGCGGCTGAGCAGAGGCGAATCCATCGCGCGCATCTCGCGCAGCTGCGCTCGGAGCGCAACTGCGCGACCAGCTGCGTGACCGAGACGGCATCGAGCTCGGAGGATCCGAGCGACGATACGGACGAGGAACCCAGCGACACCGAGGAGCTCGACATCGACAGTTACTACTTCTTGCAACCGGTGCCGACGTGGCAGCGCCGGGTGATGCTGAGGAATGCCGGAGTCCGGAGGATAGATGCCGTCGAGAAGGACGAGTGTCGCGATATACGGGCTAGCAGAGAGCACTGCGGATGCGGCTGCAAAGGATATTGCGATCCTGAAAGCTGTCCTTGCAGCAGAGCCAATGTCAAGTGTCAAGTGGACCGGCCAGGTTTCCCTTGCGGCTGCACGCGAGACGGTTGCGCAAACAGCTCAGGCAGAATCGAATTTAATCCGGTACGTGTGCGAACGCACTTTATTCACACGCTGATGCGACTCGAGCTGGAGAAGAAGCAACGCGAGGAGGAAGGCGGCGGCGAGCACACGGATCAGGTCGCGGACAATCAGAGGCAGAGCGGCAGGGGTAACGGCGGTTCTCTGAGAGACATCGATTCCCTAGGGATGGAGATTGCCGGCAGGAGCGGCGACGCGTGCGCGATCCCGGGTTCCGGGGGCGGGGGCGGATTCACGACCTTGCACTACGAGACGGGCCACGAGGGTGGCGTGGTGACGGCAGGCTGCCAGCCGGAAGTGCCTGGCACCAGGGAGGACAGTTTAGACCTGTACGCGATTAGAGACGATTGTTACGCGAGCGAGGACACGGTGGACGGTAGCCAATCGGTCGCGGCACAGCGGAAGCTGCATCCCGAATTCGGGGGCCAGGCCTTCCAGAGCTTCTCGGCAGGCGCGCAAAACGGAGGCGCGGGCGGCGCCGGCGGTGGCATGAGCTTCCAGCAATCCTCGTACCAGGATTACGTGAATTCGCCGTACGCGAATCTGCCGTCCACGTCGCGGGTCTCGCAATTCCAGCCGCCCCCACCGCCGCAATTCCAATCGTCGCCTAATCCGACCGCGTTCGCGCACTACGGCCCTTACGGAGGCACCCAGGATGCCGCGAACGCCGCCCTCCAGAGTAATTGTAGCGCGCAGCTCCATCAAGTGCCGGCACCACCGCCACCAGgtcagcaacagcagcagcagcagcagcagcagcagcaacaacacTCATCCTACGACACGACGGTATTCGCGCAGGACGAGGCTACGAGTACAGCGCAGTACACGAATCTCACTAATTCGGTACAGCCGATGAACGCGACGACGGTGGTGCAGCAGATGCAGGGCAAGCTCGAGCCGTTCTCGGAGCTGCTCAGCGGCAGGTACTCGTACTACGGCGAGATGCACGAACCGCAGCAGCATCACGGTACTTATGGTGCTCACGGGGGCCATGGAGGTGCGACCGGCAAGATCGCGGAGATGGTCGTCGAGCCCTGTCAGGTCGCCGCTGAACAACAGCCCGAGAACACGTCCGAGGATTGCGACGAGAACTTTGGCGAGATTATCAAAAAGTCTATGGTCGAGACCGTGTCCGCTTAA
Protein Sequence
MYHPPHLRHLRTGPLPIPFLSCGRFREQERHKRMEETPEMESPSARQDCLVEAQEDSTSVEPEAKSVLLSPSKTMATMTIATTPATEIEDNARDSVENSICEKLDRGLENQESQERQLSDYPCLRKSEEEKENELKVGKLEKETSESGKNFEVDIDVESTKDSLQEPEESSKGPDSQNWNKDEEDRIEKKRSSGGDFLPIGAEIRRVGVEISEEEVTQMRNDVRRLSPVLVSLRERTLGEVFLSSQSCLFGDEVDDKTASRNNANSQESFGKNDSGIQDIDQSEKRDVDEEETVIKINASLSDCTNSKLNHEEETLDVDITSLVPSRLENSDRTSQDDIKDTNVIATIETTSCTPTKKEALSSPCRHLSVVLNRIKEGDTKNDTLTDENINENTWNIEGSSPCPKRRRDSVEEECDSSSEISKTKERSSKKPRLQINSSPMTRSKKCELTDSQSPDRNLILKKCKVVLERIRSEFEQSQEEESHVEELEAKRPEREELAPVAVIGKLEEDEEVVLTSSSPSGENNRAFNELDSLETTPSSPEEGETPEETSVDVGAEGVDTETETETGSDSSEISPMTNIRELRDVDMASDHQLPCSEEGPLCCVETMAPIMTRLEAERPEAYTEDSAESLTLATGARDEVRSDGSDSGLGNEISGDPGPAPAPESDSETSFLDRLPDDILSDKEKGVNQLDGFAPSSSTSETPGQAPLTSFRTLPPKSNLKRRLTDCMEGDESRSNPDEPVKKKRNIQFDAVTVYYFPRTQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRAHLAQLRSERNCATSCVTETASSSEDPSDDTDEEPSDTEELDIDSYYFLQPVPTWQRRVMLRNAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRPGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEGGGEHTDQVADNQRQSGRGNGGSLRDIDSLGMEIAGRSGDACAIPGSGGGGGFTTLHYETGHEGGVVTAGCQPEVPGTREDSLDLYAIRDDCYASEDTVDGSQSVAAQRKLHPEFGGQAFQSFSAGAQNGGAGGAGGGMSFQQSSYQDYVNSPYANLPSTSRVSQFQPPPPPQFQSSPNPTAFAHYGPYGGTQDAANAALQSNCSAQLHQVPAPPPPGQQQQQQQQQQQQQHSSYDTTVFAQDEATSTAQYTNLTNSVQPMNATTVVQQMQGKLEPFSELLSGRYSYYGEMHEPQQHHGTYGAHGGHGGATGKIAEMVVEPCQVAAEQQPENTSEDCDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2