Pimp034405.1
Basic Information
- Insect
- Prenolepis imparis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_030444845.1
- Location
- JAUDTA010000014.1:497840-504817[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.39 2e+04 -3.3 2.0 89 152 340 403 293 419 0.55 2 4 3.2e-100 1.6e-95 320.6 9.9 1 218 709 921 709 921 0.92 3 4 0.31 1.6e+04 -3.0 0.0 28 53 1049 1074 1036 1089 0.76 4 4 1 5.1e+04 -4.7 0.7 65 77 1137 1149 1132 1169 0.33
Sequence Information
- Coding Sequence
- ATGGCAGAAACACCCGAGATGGAATCGCCTTCGGCCCGTCAGGACTGTCTCGTTGAGGCCCAAGAGGATTCCACCTCAGTGGAGCCTGAAGCGGAAAGCGTATTATCTCCAAGCaagacgatgacgacgacgatgacggcGGCAACGACGCCAGCGACAGAAGCTGAGGACAGCGCGCGAGATTCTCGCGAGGACTTGGTGTGCGAGAGACTGGACAAAGAACCGGAAAATCAAGGATCTCAGGAGAAACAATTGAGCGATTATCCTTGCCTCCGGAAActggaagaagagagagacatGGATCTAAAGTTGGAAAAAGAGAGCGGCAAAATGGagaaaaatttagatattgaTTTCGACATGGTGTCGACGAAAGATTCTCTCCAAGAACCTGAAGAGTCTTTGAAGATGCCTGATTCTCCGAATGTAGAGGATGAGGAAGATAGAATTGGAAAGAAGAGGTCGACCGGGAGTGACTTTCTGCCAATCGGCGCGGAGATCAAGAGGGTTGGCGTCGAGATCTCGGAGGAAGAGGCGACCCAAATGAGAAACGACGTCAGAAGATTGTCGCCAGTATTAGTGAGTTTGCGGGAGAGAACCTTGGGCGAAGTTTTCCTGTCTTCGCAATCCTGTCTCTTCGGGGACGAGATTGACGGGAAGACGTCGCGGAGTAATGACGTCCCGCAAGAATCATTTGTGAAGAACGATTCTAAAATTGAGGATGTCGATCAAGGCGGAAAGCGGCATGTCGACGAGGAGGAAACGGTCATCAAGATCGGCACGAGTCTTTCAGATTGCGCAAACGAGAAGCAGAATTATGATGAGGAGATGCTCGGTGTCGACGTAGCTTCTCCGGTTCCCTCTAGGTCCGATAATTCGGACGAAATGAATCAGAACGACGTCAACAACGCGAATGTCAGGAGCGTATCCTGCACGCCGACCAAGAACGAAGCAACGTCGAGTCCTGCGTCGAGTCCCGTTTGTCGACATTTAGCTGTTGTACTGAACCGCATCAAGGAGGAAGATATGAAAGAAGACAAACTGACTGATGAAAATGTCGACGAGAGTATCTGGAACGTCGATGAAGGTTCTCTGCATtctaaaagaagaagaaattcCGTCGAGGAAGATTGTGATTCGTCTTCGGAGATTTCGAAAACCAGCGAGAGAAGCCCGAAGAAAGTACGGTGGCAAAATAATTCCTGCCCGATGACGAGATCGAAGAAGTGCGAGCTGACGGAAGGTAGTCAAAGTCCAGATCGTAATCTGATACTAAAGACGTGCAAGGTAGTGCTGGAGCGAATAAAAAGCGAGCTCGAACAATCTCAAGGAGAGGAATCCCACGTCGAGGAATTCGAAGCGCTGAAAAGATCCGAAAGAGAAGAATTCGCGCCTGTTGCGGTGATTGGCAAGCTGGAGGTAGACGAGGAGGTGGTACTGGCGAGCTCATCGCCCTCGGGTGAGAATAGCCGTGCGTTTAACGAATTGGTCTCGTTGGAGACGACGCCGAGCTCGCCGGAAGAGGGAGAGACGACGCCGGAAGAAACATCGGTCGACGTCGGCGCCGAAGGTGTCGACACCGAGACGGAAACCGAGACCGGCTCCGACAGCTCGGAGGTGTCTCCCATGACAAACATCCGGGAGCTACGCGACGTCGACATGGCGCCCGAGCATCAGCTGCCCTGCTCCGAGGAAGGGCCGCTGTGCTGCGTCGAAGCAATGGCGCCGATCATGACGAGGTTGGAAGCCGAACGACCGGAAGCGTATACGGAGGACTCTGCTGAAAGTCTGACATTGGCTACCGGTGCCAGAGACGAAGTTAGATCCGATGGAAGCGATTCCGGTCTAGGGAATGAGATTTCTGGTGATCCTGGACCGGCGCCCGCACCGGAGAGCGACTCGGAGACCTCTTTTCTCGACAGACTGCCGGACGATATCCTATCCGACAAGGAGAAAGGCGTGAATCAACTAGATGGCTTCGCGCCGTCTTCTGGCACGCCTGAGACCTCGGGCCAGGCGCCCCTGACAAGTTTCCGGACACTTCCAGCCAAGAGCAATTTGAAGCGCAGGCTGACCGACTGCATGGAGGGCGATGAGTCGCGAAGCAACCCCGATGAGCCCGTAAAGAAAAAGCGCAACATCCAGTTCGATGCAGTGACAGTTTATTACTTTCCCAGGACGCAGGGCTTCACCTGCGTACCTTCCCAGggcGGCAGTACTCTGGGGATGAGcgccacacacacacacgccgAGAGATTTTCATTGTCGGAACATGCGGCTGAACAGAGACGAATCCATCGCGCGCATCTCGCGCAATTGCGCTCCGAGCGCAACTGCGCGACCAGCTGCGTAACCGAGACGGCGTCGAGCTCGGAGGATCCGAGCGACGACACCGACGAGGAGCCGAGCGACACCGAGGAGCTCGACATCGACAGCTATTACTTCCTGCAGCCGGTGCCGACGTGGCAGCGCCGGGTGATGCTGAGGAACGCCGGAGTGCGGAGGATAGACGCCGTCGAGAAGGATGAATGTCGCGACATACGCGCTAGCAGAGAGCACTGCGGATGCGGCTGCAAAGGATACTGCGACCCTGAAAGCTGCCCTTGCAGCAGGGCCAGCGTCAAGTGTCAAGTGGACCGACCGGGATTCCCTTGCGGCTGCACGCGAGACGGTTGCGCAAACAGCTCTGGCAGAATCGAATTTAATCCGGTGCGTGTGCGAACGCACTTTATTCACACGCTAATGCGACTCGAGCTGGAGAAGAAGCAGCGCGAGGAGGAGGTCGGCGGCGAGCACGCGGATCAGGTTGCGGACAATCAGCGGCAGGGCGGCAGGGACTCCCTAGGGATGGATATCGCCGGCAGGAGCAGCGACGCGTGCGCGATCCCGGGTCCCGGGGGCGGAGGGGGATTCACGACCTTGCACTACGAGACGGGTCACGAGGGCGGCGTGGTGACGGCGGGCTGCCAGCCGGAAGTGCCCGGCACGAGGGAGGACAGTTTAGACCTGTACGCGATTAGGGACGATTGTTACGCGAGCGAGGACGCGGTGGACGGCAGTCAATCGGTCGCGGTGCAGCGGAAGCTGCATCCCGAATTCGGCCAGGCCTTCCAGAGTTTCTCGACGGGCGCGCAAAACGGCGGGCCAGGCGGCGCCGGGAGCGGCATGAGCTTCCAGCAATCCTCGTATCAGGATTACGTGAATTCGCCGTACGCGAATCTACCGTCCACGTCGCGGGTCTCGCAATTCCAGCCGCCGCAATTTCAATCCTCGCCTAATCCGGCCGCGTTCGCGCACTACGGGCCCTACGGCGGCACCCAGGATCCCGCGAACGCCGCTCTTCAGGGTAATTGCACCGCGCAGCTCCATCAAGTGTCGGCGCCACCGCCACCGGgtcagcagcaacagcagcagcagcagcaacaacacTCGTCCTACGACACGACCGTGTTCGCGCAGGATGAGGCTGCGAATACAGCGCAGTATACGAATCTCACTAATTCGGTACCGCCGATGAACGCGACGACGGTGGTGCAGCAGATGCAGAGCAAGCTCGAGCCCTTCTCGGAGCTGCTCAGCGGCAGATACTCGTACTACGGCGAGATGCACGAACCGCAGCAGCATCACGGTACTTACGGAGCTCATGGTGCTCACGCAGCTGCAGCCGGCAAGATCGCGGAGATGGTAGTCGAACCCGGCCAGGTCACCGGCGAGCAACAGCCCGAGAGCACCTCCGAGGATTGTGACGAGAACTTTGGCGAGATTATCAAAAAGTCGATGGTCGAGACCGTGTCCGTTTAA
- Protein Sequence
- MAETPEMESPSARQDCLVEAQEDSTSVEPEAESVLSPSKTMTTTMTAATTPATEAEDSARDSREDLVCERLDKEPENQGSQEKQLSDYPCLRKLEEERDMDLKLEKESGKMEKNLDIDFDMVSTKDSLQEPEESLKMPDSPNVEDEEDRIGKKRSTGSDFLPIGAEIKRVGVEISEEEATQMRNDVRRLSPVLVSLRERTLGEVFLSSQSCLFGDEIDGKTSRSNDVPQESFVKNDSKIEDVDQGGKRHVDEEETVIKIGTSLSDCANEKQNYDEEMLGVDVASPVPSRSDNSDEMNQNDVNNANVRSVSCTPTKNEATSSPASSPVCRHLAVVLNRIKEEDMKEDKLTDENVDESIWNVDEGSLHSKRRRNSVEEDCDSSSEISKTSERSPKKVRWQNNSCPMTRSKKCELTEGSQSPDRNLILKTCKVVLERIKSELEQSQGEESHVEEFEALKRSEREEFAPVAVIGKLEVDEEVVLASSSPSGENSRAFNELVSLETTPSSPEEGETTPEETSVDVGAEGVDTETETETGSDSSEVSPMTNIRELRDVDMAPEHQLPCSEEGPLCCVEAMAPIMTRLEAERPEAYTEDSAESLTLATGARDEVRSDGSDSGLGNEISGDPGPAPAPESDSETSFLDRLPDDILSDKEKGVNQLDGFAPSSGTPETSGQAPLTSFRTLPAKSNLKRRLTDCMEGDESRSNPDEPVKKKRNIQFDAVTVYYFPRTQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRAHLAQLRSERNCATSCVTETASSSEDPSDDTDEEPSDTEELDIDSYYFLQPVPTWQRRVMLRNAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRASVKCQVDRPGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEVGGEHADQVADNQRQGGRDSLGMDIAGRSSDACAIPGPGGGGGFTTLHYETGHEGGVVTAGCQPEVPGTREDSLDLYAIRDDCYASEDAVDGSQSVAVQRKLHPEFGQAFQSFSTGAQNGGPGGAGSGMSFQQSSYQDYVNSPYANLPSTSRVSQFQPPQFQSSPNPAAFAHYGPYGGTQDPANAALQGNCTAQLHQVSAPPPPGQQQQQQQQQQHSSYDTTVFAQDEAANTAQYTNLTNSVPPMNATTVVQQMQSKLEPFSELLSGRYSYYGEMHEPQQHHGTYGAHGAHAAAAGKIAEMVVEPGQVTGEQQPESTSEDCDENFGEIIKKSMVETVSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00264988;
- 90% Identity
- -
- 80% Identity
- -