Lnig004290.1
Basic Information
- Insect
- Lasius niger
- Gene Symbol
- CSRNP3
- Assembly
- GCA_001045655.1
- Location
- LBMM01001757.1:1-10913[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.45 8e+03 -3.5 1.4 123 123 86 86 21 165 0.59 2 4 0.32 5.8e+03 -3.1 1.1 48 75 427 454 370 495 0.56 3 4 1.8e-99 3.2e-95 318.2 10.6 1 218 711 923 711 923 0.92 4 4 0.077 1.4e+03 -1.0 2.8 64 96 1151 1182 1147 1210 0.42
Sequence Information
- Coding Sequence
- ATGGCAGAAACACCCGAGATGGAATCGCCTTCGGCCCGTCAGGACTGTCTCGTTGAGGCCCAAGAGGATTCCACCTCAGTGGAGCCTGAAGCGGAAAGCGTATCATCTCCAAGCaagacgatgacgacgacgatgacgccAGCAACAGAAGCTGAGAACGACGCGCGAGATTCTCACGAAGACTTGGTGCGCGAGACACTGGACAAAGGATCGGAAAATCAAGGATCTCAGGAGAGACAATCGAGTGACTATCCTTGCCTCCGGAAActggagggagagagagacgtggACCTAAAGTTGGAGAAAGAAACCAGCGAAATCGggaaaaattcagatattgaTTTCGACGTGGAATCGACGAAGGATCCTCTTCAAGAACCCGAAGAGTCGTTGAAGATGCCTGATTCTCAGGATTGGAACATGGAGGATGAGGAAGATAGAGTCGAAAAGAAGAGGTCGAGCGATTTTCTGCCGATCGGCGCGGAGATCAGGAGGGTTGGCGTCGAGATCTCGGAGGAAGAGGCGACCCAAATGAGAAATGACGTCAGAAGGTTGTCGCCAGTATTAGTGAGCTTGCGGGAGAGGACCTTGGGCGAGGTTTTCCTGTCTTCGCAGTCCTGTCTCTTCGGGGACGAGGTTGACGGCAAGGCAGCGTCGCGGAGTAATGACGTCCCGCAAGAATCATTTGTGAAGAACGATTCCAGAATTCAGGATGTCGATCAAAGCGAAAAGCGGCGTGTCGACGAGGCGGAAACGGTCATCAAGATCGGCGCGAGTCTTTCAGATTGCGCAAACGGGAAGCTGAATTGTGAAGAGGAGACGCTCGGCGTCGACGTAGCGTCTTCGGTTCTCTCTAGGTCCGATAATTCAGACGGAACGAGTCAGGACGACGTCAATAACGCGAATGCGACTGCGAATATCAGGGACGCATCCTGCACGCCGACCAAGGAAGCGACATCGAGCCCTGCATCGTCGAGTCCCGCCTGTCGACGTTTAGCGGTGGTGCTGAACCGCATCAAGGAGGAAGACGTGAAAGGAAACGAACTGACGGACGAAAATGACGATGGGAGCATCTGGAACGTCGAGGAAGGTTCTCTGTGTtccaaaagaagaagagattcCGTCGAAGAAGAGTGCGATTCGTCTTCGGAGATTTCGAAAGCCAGGGAGAGAAGCCCGAAGAAGCCGCGGTGGCAAAATAACTCCTCCCCGATGACGAGATCGAAGAAGTGCGAGCTGTCAGAAGATGGTCAAAGTCCAGATCGCAATCTGATGCTAAAAAAGTGCAAGGTGGTGCTGGAGCGAATCAGGAGCGAGATCGAGCAATCTCAAGAAGAGGAGTCCCACGTCGAGGAACTCGAGGCGCTGAAAAGATCCGAGAGAGAGGAACTCGCGCCCGTGGCGGTGATTGGCAAGCTGGAGGAGGATGAAGAGGTTGTACTGACGAGCTCATCGCCCTCCACGGGCGAGAATAGCCGCGCGTTTAACGAACTGGACTCGTTGGAGACGACGCCGAGCTCGCCGGAAGAGGGTGAGACGACGCCGGAAGAAACATCGGTTGACGTCGGCGCCGAGGGTGTCGACACCGAGACGGAAACCGAGACCGGCTCCGACAGCTCGGAGGTGTCTCCCATGACAAACATCCGGGAGCTACGTGACGTCGACATGGCGTCCGATCATCAGCTGCCCTGCTCCGAGGAAGGGCCGCTGTGCTGCGTGGAGGCGATGGCGCCGATCATGACGAGGTTGGAGGCCGAACGACCGGAAGCGTACACGGAGGACTCTGCCGAGAGTCTGACATTGGCCACCGGTGCCAGAGACGAAGTTAGATCCGATGGAAGCGATTCCGGTCTAGGGAATGAGATCTCTGGTGATCCTGGACCGGCGCCCGCACCGGAGAGCGACTCGGAGACCTCTTTTCTCGACAGACTGCCGGACGATATCCTATCTGACAAGGAGAAAGGCGTGAATCAACTAGATGGCTTCGCGCCGTCTTCAGGTACGCCTGAGACCCCGAGCCAGGCACCCCTGACAAGTTTCCGGACACTTCCGGCCAAGAGTAATTTGAAACGCAGGCTGACCGACTGCATGGAGGGCGATGAATCGCGAAGCAACCCCGATGAGCCCGTGAAGAAAAAGCGCAACATCCAGTTCGATGCAGTGACAGTTTATTACTTCTCCAGGACGCAGGGCTTCACCTGCGTACCTTCCCAGgGCGGCAGCACTCTGGGTATGAgcgccacacacacacacgccgAGAGATTCTCGTTGTCGGAACACGCGGCTGAGCAGAGGCGAATCCATCGCGCGCATCTCGCGCAGTTGCGCTCGGAGCGCAACTGCGCGACCAGCTGCGTGACGGAGACGGCGTCGAGCTCGGAGGATCCGAGCGACGACACCGACGAGGAGCCTAGCGACACCGAGGAGCTCGACATCGACAGTTACTACTTCCTGCAGCCGGTGCCGACGTGGCAGCGCCGGGTGATGCTGAGGAATGCCGGGGTGCGGAGGATAGATGCCGTCGAGAAGGATGAGTGTCGCGACATACGCGCTAGCAGAGAACACTGCGGATGCGGCTGCAAAGGATACTGCGACCCTGAAAGCTGCCCTTGCAGCAGGGCCAGCGTCAAGTGTCAAGTGGACCGACCGGGATTCCCTTGCGGCTGCACGCGAGACGGTTGCGCAAACAGCTCCGGCAGAATCGAATTTAATCCGGTGCGTGTGCGAACGCACTTTATTCACACGCTAATGCGACTCGAGCTGGAGAAGAAGCAGCGCGAGGAGGAGGTCGGCGGCGAGCACGCGGATCAGGTTGCGGACAATCAGAGGCAGGGCGGCAGAGGTAACGGCGGTTCTCTCAGAGACATCGATTCCCTAGGGATGGAGATTGCCGGCAGGAGCGGCGACGCGTGCGCGATTCCTGGTCCCGGGGGCGGAGGGGGATTCACGACCTTGCACTACGAGACGGGTCACGAGGGCGGCGTGGTTACGGCGGGCTGCCAGCCGGAAGTGCCTGGCACGAGGGAGGACAGCTTAGACCTGTACGCGATCAGGGACGATTGTTACGCGAGCGAGGACGCGGTGGACGGCAGTCAGTCGGTCGCGGTACAGCGGAAGCTGCATCCCGAGTTCGGCCAGGCCTTCCAGAGCTTCTCGACGGGCGCGCAAAATGGCGGCGGAGGGGGCGCCGGGGGTGGCATGAGCTTCCAACAATCCTCGTATCAGGATTACGTCAACTCGCCGTACGCGAATCTGCCGTCCACGTCGCGGGTCTCGCAATTtcagccgccgccgccgccgccgcaatTTCAATCGTCGCCGAATCCGGCCGCGTTCGCGCACTACGGACCTTACGGCGGCACCCAGGATCCCGCAAACGCCGCTCTTCAGGGTAATTGCACCGCGCAGCTCCATCAAGTGCCggcaccaccgccgccgccaggtcagcagcaacagcaacagcaacagcagcagcagcagcagcaacaacactCGTCCTATGACACGACGGTGTTCGCGCAGGACGAGGCTGCGAGTACGACGCAGTACACGAATCTCACTAATTCGGTACAGCCGATGAACGCGACGACGGTGGTGCAGCAGATGCAGAGCAAGCTCGAGCCCTTCTCGGAGCTTCTCAGCGGCAGGTACTCGTATTACGGCGAGATGCACGAACCGCAGCAGCATCACGGTACTTACGGCGGTCACGGAGGTGCCGCCGGCAAGATGACGGAGATGGTAGTCGAACCAGGTCAGGTCGCCGGCCAGCAACAGTCCGAGGGCACCTCCGAGGATTGCGACGAGAATTTTGGCGAGATTATCAAAAAGTCGATGGTCGAGACCGTGTCCGCTTAA
- Protein Sequence
- MAETPEMESPSARQDCLVEAQEDSTSVEPEAESVSSPSKTMTTTMTPATEAENDARDSHEDLVRETLDKGSENQGSQERQSSDYPCLRKLEGERDVDLKLEKETSEIGKNSDIDFDVESTKDPLQEPEESLKMPDSQDWNMEDEEDRVEKKRSSDFLPIGAEIRRVGVEISEEEATQMRNDVRRLSPVLVSLRERTLGEVFLSSQSCLFGDEVDGKAASRSNDVPQESFVKNDSRIQDVDQSEKRRVDEAETVIKIGASLSDCANGKLNCEEETLGVDVASSVLSRSDNSDGTSQDDVNNANATANIRDASCTPTKEATSSPASSSPACRRLAVVLNRIKEEDVKGNELTDENDDGSIWNVEEGSLCSKRRRDSVEEECDSSSEISKARERSPKKPRWQNNSSPMTRSKKCELSEDGQSPDRNLMLKKCKVVLERIRSEIEQSQEEESHVEELEALKRSEREELAPVAVIGKLEEDEEVVLTSSSPSTGENSRAFNELDSLETTPSSPEEGETTPEETSVDVGAEGVDTETETETGSDSSEVSPMTNIRELRDVDMASDHQLPCSEEGPLCCVEAMAPIMTRLEAERPEAYTEDSAESLTLATGARDEVRSDGSDSGLGNEISGDPGPAPAPESDSETSFLDRLPDDILSDKEKGVNQLDGFAPSSGTPETPSQAPLTSFRTLPAKSNLKRRLTDCMEGDESRSNPDEPVKKKRNIQFDAVTVYYFSRTQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRAHLAQLRSERNCATSCVTETASSSEDPSDDTDEEPSDTEELDIDSYYFLQPVPTWQRRVMLRNAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRASVKCQVDRPGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEVGGEHADQVADNQRQGGRGNGGSLRDIDSLGMEIAGRSGDACAIPGPGGGGGFTTLHYETGHEGGVVTAGCQPEVPGTREDSLDLYAIRDDCYASEDAVDGSQSVAVQRKLHPEFGQAFQSFSTGAQNGGGGGAGGGMSFQQSSYQDYVNSPYANLPSTSRVSQFQPPPPPPQFQSSPNPAAFAHYGPYGGTQDPANAALQGNCTAQLHQVPAPPPPPGQQQQQQQQQQQQQQQHSSYDTTVFAQDEAASTTQYTNLTNSVQPMNATTVVQQMQSKLEPFSELLSGRYSYYGEMHEPQQHHGTYGGHGGAAGKMTEMVVEPGQVAGQQQSEGTSEDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00264988;
- 90% Identity
- iTF_00867391;
- 80% Identity
- -