Basic Information

Insect: Camponotus fellah
Gene Symbol: RREB1
Assembly: GCA_030586385.1
Location: JAPIVC010000606.1:216763-223837[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.6e-05 0.0076 18.1 1.0 1 23 53 75 53 75 0.97

2 15 0.00017 0.036 15.9 0.1 1 23 89 111 89 111 0.98

3 15 5.9e-05 0.012 17.4 4.2 1 21 117 137 117 140 0.95

4 15 0.0063 1.3 11.1 0.1 3 23 239 260 237 260 0.94

5 15 0.0011 0.23 13.4 3.2 2 23 266 288 266 288 0.96

6 15 0.86 1.8e+02 4.3 0.1 1 23 513 535 513 535 0.96

7 15 9.6e-05 0.02 16.8 0.2 1 23 544 566 544 566 0.98

8 15 0.0044 0.91 11.6 3.1 1 23 572 595 572 595 0.96

9 15 0.0038 0.8 11.7 2.2 3 23 963 984 961 984 0.96

10 15 0.00011 0.022 16.6 0.1 2 23 1253 1274 1252 1274 0.97

11 15 0.69 1.4e+02 4.6 8.2 1 23 1280 1303 1280 1303 0.96

12 15 0.0042 0.88 11.6 2.2 1 23 1346 1370 1346 1370 0.97

13 15 0.13 27 6.9 1.8 1 23 1450 1472 1450 1473 0.96

14 15 0.016 3.3 9.8 0.4 3 23 1526 1546 1524 1546 0.93

15 15 0.0027 0.57 12.2 5.2 1 23 1552 1574 1552 1574 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.6e-05	0.0076	18.1	1.0	1	23	53	75	53	75	0.97
2	15	0.00017	0.036	15.9	0.1	1	23	89	111	89	111	0.98
3	15	5.9e-05	0.012	17.4	4.2	1	21	117	137	117	140	0.95
4	15	0.0063	1.3	11.1	0.1	3	23	239	260	237	260	0.94
5	15	0.0011	0.23	13.4	3.2	2	23	266	288	266	288	0.96
6	15	0.86	1.8e+02	4.3	0.1	1	23	513	535	513	535	0.96
7	15	9.6e-05	0.02	16.8	0.2	1	23	544	566	544	566	0.98
8	15	0.0044	0.91	11.6	3.1	1	23	572	595	572	595	0.96
9	15	0.0038	0.8	11.7	2.2	3	23	963	984	961	984	0.96
10	15	0.00011	0.022	16.6	0.1	2	23	1253	1274	1252	1274	0.97
11	15	0.69	1.4e+02	4.6	8.2	1	23	1280	1303	1280	1303	0.96
12	15	0.0042	0.88	11.6	2.2	1	23	1346	1370	1346	1370	0.97
13	15	0.13	27	6.9	1.8	1	23	1450	1472	1450	1473	0.96
14	15	0.016	3.3	9.8	0.4	3	23	1526	1546	1524	1546	0.93
15	15	0.0027	0.57	12.2	5.2	1	23	1552	1574	1552	1574	0.98

Sequence Information

Coding Sequence: ATGTTATTGTCCCGGCTTCATTTGCGGTTCGGGGTATCAGCTTCCGGAATACTCGtGACTGAATCCGAGAATGGAATCGAGCAAGAGCAGGAGAACGAAACACAAATTGATGCCGCATCACCATCATCGAGCGTCGAGCTGACAGAAAATAGCGCGCATCCATGCCCGATGTGTCCATCGGTATTTTCCAGTTCTCATGAACTGACGAATCATCTACGCGGCCATAACTCACCTCGCAGCACAGACTGCAGCGGCGAGGAGGACTACAGCTGCGGGGTTTGCAACAAGGTCCTCAGCTCGGCGAGCTCGCTGGACCGACACGTGCTGGTACACTCGGGCGAACGGCCGTTCAAGTGCAAGTACTGCGACATGTCGTTCACGACGAACGGCAATATGAACCGTCACGTGAGATGCACCCATCGGATGGCGTCGCCGAACAGTTGCACGGATTCCGAGGGCAGCAGCGGCTCGGAGAGACCAGCGACAACGAATCAGAGCGAATACAACAACAACGAGTTAGCCAGGCGCAACTCGCCGACCTTGATCGATGACCGGCAACAAACATCATCGCCCGACAATCATCGCGCGAACAAGCGAAAATGCTCGCAAGACGACGCCAGCGATACGGAGGAGCAGAAGAGGCACAAGACTCTCATGAATAATGCTACAATGTTGATTAGATGCCAACCGGATGGGGAGCAGATGACGTTCGGTTGTCTGATTTGCGGCAAGGATTTTGTGAGCGGTGCGATGTTAGAGGCTCACATGGAACACATGCATCCGGAATCCCTGGCTACTTGCGAGATCTGCAACATGTCCTTCAAGAATCACCGGCAATTGAACCTCCATCGTTCTATGAGTCATTATAAGAAGAACGCGAACGGCAACAACAGTCGTCGCAGCACCGTAGACGGTTTCGGGGATCTCACGTTTATGGATTTTTCGGCGGCGAAGTTCGCGGAGATCGCTCGACGGATGTGTGAGCAGGAGTTGCATCGACCAGCCTCCGGTGAAGCCAACAGGTTTCAGTGTATGAAGTGTCTGCACGCGTTTCCATGCAGACAGGCTCAGCTCGATCACGAAAAGGAATGCAAGGGTCCGTACAAGAACAAGAGAAACAGCAATGAcagcaacaataataatgataacaatACCAACAACAATCTTGAAATGGAGTTGGATGCCCCATCTCCGCAGCCTGAAGATTCCAAAATGACGCGCGAGATCTTTTTCGCCGTGCTAGATCTGCAGAACAAGTCTCTGGCGCGCGAGGTAAAAGAATCTAGAGAGTCGAAAGAGATTAAGGAGCCGAAGGAAATGAAGGATTTAGCAGATATCCCGAGCATCTTGTCCGTCAGCTTAAACGGATTGCCGACTTTCCCGCGATCAGACACCAGCACGCCCGAGAATAATATCAAGTTCAATCCGAATATCGGTTCTTCGGGTTCTTCGGGTACCTGCTCGTCCGAATATAACGAGGAAGAAGCACAGGATGCCTTTACCGCAGAATTCCGAAAGATGAAACTGAAGGGTGAGTTTCCTTGCAGACTGTGTGCGTCCGTATTTCCCAATCTGCGGGCACTCAAGGGGCACAATCGCGCGCATATGAATGTAGAACCAGGAATGCCGTATCCATGCAACATGTGTCCCTTTACCAGTACCGACAAAGGAGCTTTGCTAAAGCACTTAAGATCGCATAACGGTGATCGACCTTTCGAATGCTCCCTTTGCAATTATGCGTTTACCACCAAAGCGAATTGCGAAAGGCATGTAAAGAATCGTCATGGAATGATCAGCAAGGAAGATGTTAAGAATGCACTGATATATCATCCGAGTGAGGACTCGACGAACGAGAACGTCGAGAGAAGCTCGCCCAGAGGTATTAGGGACGACGTGCGAAAAACACTCGTTTATCCGAACGAACGTGAAGAAACTTCTCAACAACAGCAGATGCATTATCCGCCTGTATTGATGGACTGTAATCCGGGACCCTCAAACTGCGCTGAGATGTTGATGAATCGCTATGAGAAGCCAGATATGTTCCACAGACCAACAAAGATACAGGCTTTGAATCTCGTAAAGAAAAATGCCGAGGAATCGAACGTATCTCATGATCTGAAGTCTAATTATTCGAAGATCGACGAAGACATCGAGTCAAGATCATCGGATGGCAGCGTGTCTCTAGTCAGCGATACCAAAACAGATACACACCAAAGAATTCAAGCTAGTCCGATGAATCTGACCAAGTCTACGACAAGCTCCGTATTGAGTTCGGGGGAGGACGGTCCGTTGGATCTGTCTATGGACGTTGTTCTGGATCTGAGCAGgaaacagaaaaaagaaagcgaAAATTCTCAGGAGGATAAACATTATAAGAACAATCAACAGGAATTATACGCCACGAATCCGGCATTGCTACTGACTCAAGCTCTGCTGAACAGAGCACGCGAAAATTCGTCGACTACGTCGCTGGAGAATTTTTACGCAAGTACTATCTATCGTAATCTCGGCACGTTGACCAGTGCCACTATGATACCGCCGTATTTCCTCAATCCTCACATGTTCAGCCAAGAATTGACCGAGAAGGGCAGACTACAGAAGGAACTGGTCAGAGGTTTGCAGTTGACCGGCGGCAGCACCCTTCCGGGTGATCCGTCATTGCCCAGCACCAGTTATGCCGCATACGCGCAAGCGCGGGAAACCTCGCAAACCTCGAGCGAACACAACGCTTACCTGATGAACGCGCAAATAGCCAGCCAGGCCGCGCCGAGCCGCGAAAAAACAGACAGCATTTCGTCGAACGATCCCGTGAAGATGGTACTTAAAAACGGTGTGTTGATTCCCAAGCAGAAACAGCGCAGATACCGCACCGAGAGACCGTTCGGCTGCGAGCACTGCACGGCAAGATTCACACTGCGAAGCAACATGGAACGACATATCAAGCAACAGCATCCTCAATACTGGAGCCAAAGACCCCGCGGCGGACACTCAACTAGAGGTAGACCGCCTATGAATCATTCGACTATGATGCAGAATCCCGGCCCGTCAACTTCGCAAGTAACTCAACCATATCCGAATATTCCAAACGTCGACTCGTCAATGGTCACATCGGATTATAATAAGCATCCCATTTCAGATCAAGTAAAGTATGCCATTCTAGCGCAACAATTGAAAGCTGATAAAATGGATGACAATGATTCAGATGACGAAATGGTAATAGATGAAGAATCAGGTGATAGGGATGCACAGGAACCGCAGGCTCAGCATGAGCTTAGTACAAGCTTGCTGAGAGATCAGTTAGAGAGCAGCGAAGGTGTTAAAGATATCGTCGTAAAAAAGGAAGTGATTGATCCGGCGGAGGAGACTTCGGGAGAATCTCATGGAGAACAGACTACGCGAAATGGCATAGACAGGACTAACAAGGAAGAATCTGCGGCTGCTGACAACAAATCGGTACACACTGAAGAAACAATCAAAACGGAATCCACCGGGAAGGAACAGAGCAAACTCGAAGACGGAGCAGCCGATCTCGCGAGTGTTTCGAAATTATTGGATAACGCATCTCAGCAATATCAGGAATTCAAACCGCAATATTTAAGTGACGAGGAAGGCCCTGTGGCCTCGACCAGTGGCAATAATTCCGGCAGCGAAAAATCCGATTCCATGAATTCCTTAAATTCTGGAAATGATTCTTCATCgaataagaagaagaaaaagaagaagaagtccGCGTATTCGATGGCGCCGAATCGAGTCCCATGCCCTTATTGCCCGCGTCAATTTCCCTGGAGTTCATCGCTGAGACGTCACATTCTCACTCATACCGGCCAGAAGCCCTTTCAGTGCACGCAGTGCTCGCATTACTTCACCACAAAATCCAATTGCGACCGTCACTTGTTGAGGAAACACAAGTCAAAAGCGAATAAAATACGCCGTGTCAGAAACTCCTCCTCGCCGGACGTCCAGGTGGTTGCCAGTAGCAGTAGTAGTAGCAGTAACAATACATTCTCTATGAGAAACGTGCCCGAGAGACCATACAAATGCAATCAGTGTCCAAGCTCGACCTTTTCTACATTAGGTAATCTGAAGAAGCATCGATCGACCAAGCATCGTAAGACTACATCCCGGTCAGAGTCTAGCGATCAGCAGAACAGTCCACCACAGTGCTCCAACACGCAAAACGATCAAAGTGATTATGAAAGCCGATCGTCAAGCGCATCCGAGAATATGGAAAATTCTAACGCAGTTGCAAAGACAAATTCTAATACGACATCGTTGACGTCGATAAATGAGAACACCAGATCGCGGAAATCGCCAAGATCGTCGCCTGGTCCCAGCGATGCTccttttaaatgttatttatgcgACAGCGGCTTTTCCGAACGTCAAGATAATTTGGATCATATCAAAATGCATCACAAACGCTCATACGACATGCTAAAAGCCAAGGGAGCCCTCGATATGGCATCTAATATGAATATAGACGCGAGTGAAGATCAGATGGCACAGCAACATCCTAGTGATGGTGAAGAGAAAAGAGGTCGTTTTCCTGATTACAGCAATAGAAagGTCATATGCGCTTTTTGTATGAGACGATTTTGGTCCGCGGAAGATCTCCGACGTCACATGAGGACCCACACAGGCGAAAGGCCCTTCGAGTGCGATATCTGCACCAGGAAGTTTACGCTGAAGCACAGCATGCTGCGCCATCGTAAAAAGCATGAGTCGGTGGATTCTGCCATGTATATAGGTAACAGCGGTGACGAGGACAATTCGCCCGCGCAGCCACCGACGATAACACCTAGAAGCCAGCAGCATTCGCCAATCTCTACGAACACCAGCAGGCCTCGTACCCAGGACAGAATCTCTCTGCCAACTGTTGCGGCGGTTGCAACAGGAGACGCGGCACCTTGCGCGCTTATGCGTTATAATCATTATGATAACATGGCCACTCTCACTGGAAGAATGGCAAACGACAGCTCGCAAAATGCCGCGCCTGCTCCTCTGCCTTCCCCACCGCTTCCCGCGGAAGTGCCTAGCGAGAGTGGTGACAACGACCTGATCTCTAATCTGCTAGGAATACGCGAGAAGGGTTTGCTCGACAAGGTTCTTCTGAGCTCGGCGGACGACGCGGCTAAATTGTTAGGTGTCAATCATAGCGAGTGA
Protein Sequence: MLLSRLHLRFGVSASGILVTESENGIEQEQENETQIDAASPSSSVELTENSAHPCPMCPSVFSSSHELTNHLRGHNSPRSTDCSGEEDYSCGVCNKVLSSASSLDRHVLVHSGERPFKCKYCDMSFTTNGNMNRHVRCTHRMASPNSCTDSEGSSGSERPATTNQSEYNNNELARRNSPTLIDDRQQTSSPDNHRANKRKCSQDDASDTEEQKRHKTLMNNATMLIRCQPDGEQMTFGCLICGKDFVSGAMLEAHMEHMHPESLATCEICNMSFKNHRQLNLHRSMSHYKKNANGNNSRRSTVDGFGDLTFMDFSAAKFAEIARRMCEQELHRPASGEANRFQCMKCLHAFPCRQAQLDHEKECKGPYKNKRNSNDSNNNNDNNTNNNLEMELDAPSPQPEDSKMTREIFFAVLDLQNKSLAREVKESRESKEIKEPKEMKDLADIPSILSVSLNGLPTFPRSDTSTPENNIKFNPNIGSSGSSGTCSSEYNEEEAQDAFTAEFRKMKLKGEFPCRLCASVFPNLRALKGHNRAHMNVEPGMPYPCNMCPFTSTDKGALLKHLRSHNGDRPFECSLCNYAFTTKANCERHVKNRHGMISKEDVKNALIYHPSEDSTNENVERSSPRGIRDDVRKTLVYPNEREETSQQQQMHYPPVLMDCNPGPSNCAEMLMNRYEKPDMFHRPTKIQALNLVKKNAEESNVSHDLKSNYSKIDEDIESRSSDGSVSLVSDTKTDTHQRIQASPMNLTKSTTSSVLSSGEDGPLDLSMDVVLDLSRKQKKESENSQEDKHYKNNQQELYATNPALLLTQALLNRARENSSTTSLENFYASTIYRNLGTLTSATMIPPYFLNPHMFSQELTEKGRLQKELVRGLQLTGGSTLPGDPSLPSTSYAAYAQARETSQTSSEHNAYLMNAQIASQAAPSREKTDSISSNDPVKMVLKNGVLIPKQKQRRYRTERPFGCEHCTARFTLRSNMERHIKQQHPQYWSQRPRGGHSTRGRPPMNHSTMMQNPGPSTSQVTQPYPNIPNVDSSMVTSDYNKHPISDQVKYAILAQQLKADKMDDNDSDDEMVIDEESGDRDAQEPQAQHELSTSLLRDQLESSEGVKDIVVKKEVIDPAEETSGESHGEQTTRNGIDRTNKEESAAADNKSVHTEETIKTESTGKEQSKLEDGAADLASVSKLLDNASQQYQEFKPQYLSDEEGPVASTSGNNSGSEKSDSMNSLNSGNDSSSNKKKKKKKKSAYSMAPNRVPCPYCPRQFPWSSSLRRHILTHTGQKPFQCTQCSHYFTTKSNCDRHLLRKHKSKANKIRRVRNSSSPDVQVVASSSSSSSNNTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHRKTTSRSESSDQQNSPPQCSNTQNDQSDYESRSSSASENMENSNAVAKTNSNTTSLTSINENTRSRKSPRSSPGPSDAPFKCYLCDSGFSERQDNLDHIKMHHKRSYDMLKAKGALDMASNMNIDASEDQMAQQHPSDGEEKRGRFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFECDICTRKFTLKHSMLRHRKKHESVDSAMYIGNSGDEDNSPAQPPTITPRSQQHSPISTNTSRPRTQDRISLPTVAAVATGDAAPCALMRYNHYDNMATLTGRMANDSSQNAAPAPLPSPPLPAEVPSESGDNDLISNLLGIREKGLLDKVLLSSADDAAKLLGVNHSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01016049;
90% Identity: iTF_00868296;
80% Identity: -