Cfel030833.1
Basic Information
- Insect
- Camponotus fellah
- Gene Symbol
- Hr39
- Assembly
- GCA_030586385.1
- Location
- JAPIVC010000606.1:511458-515739[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.75 9.5e+03 -2.9 7.1 130 174 42 86 15 113 0.51 2 6 3.7 4.8e+04 -5.2 11.4 51 164 283 396 239 442 0.65 3 6 4 5.1e+04 -7.1 8.7 81 137 426 502 402 539 0.40 4 6 7.6e-08 0.00097 20.1 0.0 1 21 608 628 608 637 0.92 5 6 0.59 7.5e+03 -2.6 0.0 88 113 666 691 638 699 0.71 6 6 3.5e-70 4.4e-66 225.5 0.0 197 408 795 1001 748 1001 0.93
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGACCAGGGCCTGGTTCGGATTCAGGCTGGTGGTCGGCCACACAGACCTGGAAatcatcgtcgtcatcgtcgtcgtcggcggtggcggcggcgacCTCATCTTCAACTTCCACTTCAGCAGCAGGTTCTGCGTCCGTTTCGGTTTCCTGCGTCACGTCCAGTTCGTCCCCGACGAGCTCCTCCACCTCGACCAACACATCCGCGACCTGTTGCCCCTTGCCTTGTATCGGTGTATCGATGAGCCCGAGCCGTTCCACGGAGACGGGGAAAAACGTGTCTGTCACTACTATTAACGTACCGCCCAATCAAGAAATGCACGATGGTAAAGGAGTGTGTAAATATCTCGGAGGGCAGAACGGTGTGACGGTGTCGGTGGTATCGACCTCGATGCTGGGATGCGGAAACACCGTCCCGACGAGCGGAATCTGCGCGAATACGGGTCCGCATAGTATCGGAATCGGCGATATCCTCGCCGCGAACGCGGCCGACATCGACGATCCCGAAGACAGCGATGGTGAAATCAGCAAGATTGACTTTAGAGGCGTCAATTTGCGCTCGAAGAAGAAACGCGACGTGTCGGGTAATCAGAACGGTGACAAGATCGGCGATGGAGATGCGAATGGCGATGGCGCGGGATGCTGCGATAATTCGCAACAGCAGCCCGAGAGGCCAATGTCGTGGGAGGGAGAACTGTCGGACCAAGAAATGTCTTCCAATACAATTACTAATCAGgacCATAACGAGGAAACCTCCATGGAGGGAGTTCAAGTGTGCAGTACGAGTCCTGGACCCATGGAACAGAAATTTCCGATTAAATCAGAGCCAGATTTTCGATCCAGTCCGGCTTTCACAATAGGATCTTTTCACGACGCTGGACTACCTATGACACACAATCAACAATTacaacagcagcaacagcaacaacGCGGTATCGAAAATCTCGAGCAGACACAACAGAGCGATTTACCGCTTCTCGTGGGCAAGCTTCTGGGCGGATACAACAATTCCACGCCTAATCACAGCCCTATTCTCAATCCACGACATCATCTAACCAAGCACAGTCATACTAGATCACAGGTACCGTCACCAGATTCCGCCGTTCATTCCGCATACAGCGTCTTCAGTTCACCGACACAAAGTCCTCATGCGGCACGGCACTCTGCTCTAGGTGCGGGCAGCCCGATACCGTCCTCGTCATTATCCCTCTCTCGACACAGCTTCAACAATTCGACCTCCTCGCTATCCCTATCGCTGTCACATTCGCTGTCAAGGAATAACTCGGACGCTTCCAGTAGTTGTTATAGTTATGGCTCGCTTAGTCCGCCTACGCATTCACCCGTCCAGCAGCCGAGACATTCGCATTCGCACTCGCAACATCACCAGCATCAAGTGGCGCAAGGTAGCCCGTTGCATCTTCCAACAGCCTCGTCTGCTGTCGCCGCGCATCATTATTCATCCTCTTCAGTGCCAGGCTCGGAACTGTCACCGGACGGCCACGCGGTCGTAGAGGATCAAGAAGACTGTAGAATACCTTCTGCGCCGTCAGGTATTTCCACGAGACAGCAACTGATAAATAGTCCCTGTCCGATTTGCGGTGACAAGATAAGCGGATTTCATTACGGTATCTTCTCCTGTGAATCGTGCAAGGGATTCTTCAAGCGTACCGTCCAGAATCGCAAGAACTACGTGTGCCTTAGAGGCGCAGCTTGTCCGGTCACCGTGGCCACGAGGAAAAAATGCCCGGCCTGCCGCTTCGACAAGTGCCTCAACATGGGTATGAAGCTCGAGGCGATCAGGGAGGATCGTACCAGAGGTGGTAGAAGTACGTATCAGTGCACCTATACTCTACCGGCGAATCTCGTCGGCAGTCCCGCCGGCGGTATGGCCGGCAGCGAAAAACTGACGGCAGCGGGCAATTGCAGCCCGGCACCGGCCGGAAGCGAGCACCATTACTCGGTCAGATATCACTCGAATCATTCGCATAAAATGCAAGTGCCGCAACTCTTGCAAGATATCATGGATGTGGAGCATCTCTGGCATTATAACGATAATGATCGAGTAAGCGGGGGAATGTCCGGGAATGCGAGAAACATCTCTGTTAGCGGTGACAATAATATGCAATGTGGATTCGGAAGTGGCCCACCGGCACCCGGCGGAACTGCGAGTGTTATTGGCACCGGAAATAACGGAGGCGCGGTGGAATGTTCGTCGAACGATTCGAGCAATGTCGATACTAACAACAGAAGAGGAGAGTCGGGTAGTCCCGCCGGCTCGGCTTCCACAAGGGCGCCCGATGAACATTCCACGAACGGCAATACCGTGAATAATGGCAATTCTCAAATCGCCAGTAATTCCAATAATGGCAATCCGACGCAACATCCGGATTTTCTGTCCAACTTGTGCAACATCGCAGATCACCGGCTCTATAAAATCGTCAAATGGTGCAAGAGTCTGCcgttattcaaaaatatctcgatCGACGAccaaatttgtttattgatcAACTCTTGGTGCGAATTACTACTCTTCTCCTGCTGTTTTCGTAGCATGAATAGTCCCGGTGAGATCAGAGTGTCTCTTGGCAAGTCGATCACTCTGGCACAAGCTAAAGAACTCGGTTTAGCGAATTGCATCGAAAGAATGCTTGCTTTTACCAATAATCTGCGAAGGCTAAGAGTAGATCAATACGAATATGTTGCAATGAagGTGATCGTACTGTTAACGTCCGACATAAGCGAATTAAAGGAACCTGAAAAAGTCAGAGCTTCTCAGGAAAAAGCCCTTCACGCATTGCAGCAATACACAATTGCGAAATATCCAGAAATGCCTGCCAAATTCGGTGAACTATTATTGAGAATTCCAGATTTACAAAGAACATGTCAAGCAGGAAAAGAACTACTCAGTGCAAAACGCGCCGAGGGAGAAGGCAGCtcctttaatcttttaatggaATTGTTAAGAGGAGATCACTGA
- Protein Sequence
- MSEQNGPSEGPGPGPGSDSGWWSATQTWKSSSSSSSSAVAAATSSSTSTSAAGSASVSVSCVTSSSSPTSSSTSTNTSATCCPLPCIGVSMSPSRSTETGKNVSVTTINVPPNQEMHDGKGVCKYLGGQNGVTVSVVSTSMLGCGNTVPTSGICANTGPHSIGIGDILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKIGDGDANGDGAGCCDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPAFTIGSFHDAGLPMTHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAVHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHSHSQHHQHQVAQGSPLHLPTASSAVAAHHYSSSSVPGSELSPDGHAVVEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMAGSEKLTAAGNCSPAPAGSEHHYSVRYHSNHSHKMQVPQLLQDIMDVEHLWHYNDNDRVSGGMSGNARNISVSGDNNMQCGFGSGPPAPGGTASVIGTGNNGGAVECSSNDSSNVDTNNRRGESGSPAGSASTRAPDEHSTNGNTVNNGNSQIASNSNNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMNSPGEIRVSLGKSITLAQAKELGLANCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDISELKEPEKVRASQEKALHALQQYTIAKYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01267641;
- 90% Identity
- iTF_00885153;
- 80% Identity
- iTF_00264363;