Cspl021313.1
Basic Information
- Insect
- Calopteryx splendens
- Gene Symbol
- -
- Assembly
- GCA_002093875.1
- Location
- LYUA01000195.1:441619-445802[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3e-11 1.9e-07 33.3 0.0 2 39 75 113 74 117 0.91 2 4 5e-10 7.5e-06 28.2 0.0 1 38 132 169 132 175 0.89 3 4 2.6e-16 3.8e-12 48.3 0.0 3 44 189 230 187 231 0.95 4 4 9.3e-19 1.4e-14 56.2 0.0 1 40 238 278 238 282 0.92
Sequence Information
- Coding Sequence
- ATGATTACCCCAGAACTACTTGGTCTTATTCCGTCTTCATCTGGACACTCAGATGGCAGTGAGGTATCGGGAGCtccaggaggaggaggcggaggaggaaccGGTGCTGGAGGCGGGGCAGGCAGCGGAGCTGGAtcagggggaggtgggggtggaggaggtggagggggcggcggaggtgGTGGTGGAAAGTGTGGCCCTGGGGGGCCAAAGAACTGGAACCATGAGGACATGGAGATGGCCCTCGACGCCCTGCGGTCCCATGCCATGAGTCTCACCCGGGCCTCTGCCACTTTTGGAATCCCGTCCACCACACTGTGGCAGCGAGCGCATCGCCTTGGCATTGATACACCCAAGAAGGATGGTGGTGGCCCACCTGGAGGGAAGTCATGGTCAGAGGATGACCTGACAACAGCCCTTGATGAACTACGTGCTGGCCGTATTTCTGCTAACCGTGCTGCTAAGGTTTACCGCATACCAAGTAGCACATTGTATAAGAttgcgaggaaggaaggaatcaaGCTCTCTGCACCATTCAACGCAACACCCACAACCTGGTCATCTGAGGACCTTAATAGAGCCCTCGAAGCAATTCGACAGGGCACATCGGTGCAGAGGGCATCATCAGAGCATGGCATCCCCAGTGGCACCCTGTATGGTAGGTGCAAGAGGGAAGGAATCGAACTCTCCAAGAGCAACCCAGTTCCCTGGTCGGAAGATGACATGAATGAGGCACTTGAAGCTGTTCGTGTTGGTGAGATGAGCATCAACCAGGCTGCGATCCATTATAACCTGCCCTATTCTTCACTGTACGGCCGATTCAAGAGGATTAGATTTGAGGCGGAGGGTGGTGGTGTGGAAAGCGGCTCGGCGCAAGGTCCCGCTGGTCCAGGAAGTGGAAGCAGCATCATGCTAACGACCAGCGGAGGAGGGCACGAGGGCATCGACTTCGAGATGTACAGCAGCTGA
- Protein Sequence
- MITPELLGLIPSSSGHSDGSEVSGAPGGGGGGGTGAGGGAGSGAGSGGGGGGGGGGGGGGGGGKCGPGGPKNWNHEDMEMALDALRSHAMSLTRASATFGIPSTTLWQRAHRLGIDTPKKDGGGPPGGKSWSEDDLTTALDELRAGRISANRAAKVYRIPSSTLYKIARKEGIKLSAPFNATPTTWSSEDLNRALEAIRQGTSVQRASSEHGIPSGTLYGRCKREGIELSKSNPVPWSEDDMNEALEAVRVGEMSINQAAIHYNLPYSSLYGRFKRIRFEAEGGGVESGSAQGPAGPGSGSSIMLTTSGGGHEGIDFEMYSS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01212600;
- 90% Identity
- iTF_01504595;
- 80% Identity
- -