Basic Information

Insect: Callosobruchus maculatus
Gene Symbol: Hr39
Assembly: GCA_900659725.1
Location: CAACVG010008692.1:1125-31228[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2 1.9e+04 -8.2 9.4 32 84 11 64 2 267 0.70

2 5 0.23 2.2e+03 -2.2 0.4 52 77 246 275 191 349 0.57

3 5 1e-08 0.0001 22.0 0.0 1 28 429 456 429 476 0.86

4 5 0.073 7.1e+02 -0.6 0.0 87 119 485 515 460 529 0.75

5 5 4e-72 3.8e-68 230.9 0.0 205 408 562 760 542 760 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2	1.9e+04	-8.2	9.4	32	84	11	64	2	267	0.70
2	5	0.23	2.2e+03	-2.2	0.4	52	77	246	275	191	349	0.57
3	5	1e-08	0.0001	22.0	0.0	1	28	429	456	429	476	0.86
4	5	0.073	7.1e+02	-0.6	0.0	87	119	485	515	460	529	0.75
5	5	4e-72	3.8e-68	230.9	0.0	205	408	562	760	542	760	0.97

Sequence Information

Coding Sequence: ATGATGGCGGCGGAGATGTCCTCCGCGCAAGCAGCGACGGCGTCGGCGACGACCGCGACGCCCGCCACCGCCCCCACCGTCGTCGCGACCGTCCCCGGCGGCCACCAGCACCACCCCCATCACCACCaacaccaccaccaccaccacgtGTCAGTGACGGCTGTCAACGTGGACGAACCGCCGCAGAGGGCGCGCAGCGCGCCACATCCAGCCGCTGCTACCACGGGTGCGGTGGGCGGCGCGCCTCATGTCACGCACAACGGCACCCCAGACGTACTAGACAGTTCCGACGCAGAAGTGGCCAGGATAGACTTCCATTCGGTGAACATGCGATCGAAGAAGAAAAGGGACGACCTGCCCAGGCCGATGAGCTGGGAAGGAGAGCTGTCCGACGGCGAAAGGGAAGTGATGTGCGTGGACGAAGAGAATTCGGAACCGGTGCCTGAAAATCTGTCGCTGCCCCAATCGAAACAGTCCCTTTCCGATCCCAAGGAAAGCCCAGTGCTGCTGATCAAGCAGCCGCCCATAGGCAACTATTCCTTGCACAGCACACCCAGCAACTCTCCCGTACTTAGCCAGAGGCACCCCGTTACAGGTGTGTCGATCATCAGTCACAAGGATCTCATGCACAAATCCCTAAACGGCGGTGGCGGTGGcgtaccccccacccccagccCGGATTCCGCCGTCCATTCTGCGTACAGCGTCTTTAGCTCGCCGACGCACAGCCCGCTTCAGCAGCGCCATCTGGCGTTGACGCCCAGCCTCAGCCGGAACAACAGCGACGCCTCGCGGTCAAGCTGTTGCAGCTTCGGCAGCGTTTCGGCGGTCTCCGTCTCGCCTACGCAGCAGTTTTCGCCCACGCACAGCCCCATacagGGTCGTCATATCCATAACATTCACAGCAGTCCTCTGCATCACAACATCTTATATCGTAGTCTTCAAGAAGATCCTACCATTCAATACTCAGCAGACCAAGAAACATTAGACGAGCCACTTGAAGATAAAACCGGACTCTTGCATAGTTCCTTACCTGCACAACCTGGTATCTCTAGGCAACAGTTAATAAACAGCCCATGTCCTATTTGCGGTGATAAAATATCTGGCTTCCACTACGGGATATTCAGCTGTGAGTCGTGTAAAGGATTTTTCAAGAGGACTGTTCAGAACAGAAAGAATTATCTGTGCCTTAGAGGAGCGCAGTGTCCAGTTACTGTTGCAACGCGGAAAAAATGTCCTGCCTGTAGGTTCGATAAGTGTCTGCAATGTGGGATGAAGCTAGAAgCAATTCGGGAGGATCGCACTCGAGGGGGCCGGTCCACCTACCAATGTTCGTACTCGCTGCCCCCGTCTCTGGCCGGACAGCAGCACCACGGAGAGTCCCGATTGACGCCCGACGGTCAACCTATCATAAAGACGGAGCCGCAAGATGGCGCAGCGTCAGGCGCGGCAGGTCCCAAGAGGATACCGCCTGGCTCCAAAGGTGTCCCGCCGTTATTGCAAGAGATAATGGACGTGGAGCACCTGTGGCACTACAGCGAATCGGAGCTGAGCAAGCTGAGCAGCGAGGGGCGGCTGACGAGGGAGGGCAGCGGGGGCAGCGGCGGAGGCGGCGGGGGCGGCGTTCACAACCTGTCAACGCATCCGCTGCTGGCAGGAACCGCCCTTGCTGGCTCCGCCGACACCAATCCGGACTTCGTCGCCAATCTGTGCAATATCGCCGACCATCGACTCTACAAGATAGTCAAGTGGTGCAAGAGTCTGCCTCTTTTCAAGAATATCTCGATCGACGATCAGATATGCCTGCTGATCAACTCGTGGTGCGAATTGTTGCTGTTCTCTTGCTGTTTCCGGTCGATGTCCACGCCCGGGGAGATCCGCGTTTCGCTGGGAAAGAGCATCAGCTTGGCGCAGGCGCGGGAAATGGGCGTCCAGGCGTGCATCGAACGCATGCTCAATTTCACCGAACAACTGAGGCGACTCAGAGTCGATAGGTACGAGTACATCGCCATGAAGGTCATCCTGCTACTCACTTCAGATACGTCCGAACTACGAGATGCAGAAAAGGTCCGAGTGTCACAGGAAAAAGCCTTGAAGGCACTTCAAGATTACACTTTGTCCCATTATCCTGAGAGCCCCGCAAAATTTGGCGAACTGTTGCTTCGCATTCCAGAACTGCAGAGAACTTGCCAGGTTGGAAAAGAAATGCTGACCATAAAATCCAAGGATGGCGACGGACCAAGCTTCAACCTCTTGATGGAACTCCTGAGAGGGGATCACTGA
Protein Sequence: MMAAEMSSAQAATASATTATPATAPTVVATVPGGHQHHPHHHQHHHHHHVSVTAVNVDEPPQRARSAPHPAAATTGAVGGAPHVTHNGTPDVLDSSDAEVARIDFHSVNMRSKKKRDDLPRPMSWEGELSDGEREVMCVDEENSEPVPENLSLPQSKQSLSDPKESPVLLIKQPPIGNYSLHSTPSNSPVLSQRHPVTGVSIISHKDLMHKSLNGGGGGVPPTPSPDSAVHSAYSVFSSPTHSPLQQRHLALTPSLSRNNSDASRSSCCSFGSVSAVSVSPTQQFSPTHSPIQGRHIHNIHSSPLHHNILYRSLQEDPTIQYSADQETLDEPLEDKTGLLHSSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYLCLRGAQCPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLAGQQHHGESRLTPDGQPIIKTEPQDGAASGAAGPKRIPPGSKGVPPLLQEIMDVEHLWHYSESELSKLSSEGRLTREGSGGSGGGGGGGVHNLSTHPLLAGTALAGSADTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSISLAQAREMGVQACIERMLNFTEQLRRLRVDRYEYIAMKVILLLTSDTSELRDAEKVRVSQEKALKALQDYTLSHYPESPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260746; iTF_00260639; iTF_00249000; iTF_00249001; iTF_00249043;
90% Identity: iTF_00260746; iTF_00260639; iTF_00249000; iTF_00249001; iTF_00249043;
80% Identity: iTF_00260746; iTF_00260639;