Basic Information

Insect: Calliphora vicina
Gene Symbol: zfh1
Assembly: GCA_958450345.1
Location: OY288232.1:110970725-110979576[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00017 0.015 16.7 0.7 1 23 198 220 198 220 0.95

2 15 0.057 5 8.7 1.2 3 23 228 248 226 248 0.95

3 15 0.00016 0.014 16.8 0.3 1 23 426 448 426 448 0.98

4 15 0.0021 0.18 13.3 0.4 1 23 454 476 454 476 0.98

5 15 6.2e-05 0.0054 18.1 3.7 1 23 508 530 508 530 0.97

6 15 0.015 1.3 10.6 0.3 1 23 551 573 551 573 0.94

7 15 0.013 1.1 10.8 0.8 1 23 579 602 579 602 0.97

8 15 0.46 40 5.9 0.4 5 19 613 627 610 628 0.91

9 15 0.00028 0.024 16.0 5.6 1 23 637 659 637 659 0.97

10 15 0.062 5.4 8.6 1.7 2 23 665 686 664 686 0.97

11 15 8.7e-05 0.0076 17.6 0.2 1 23 695 717 695 717 0.98

12 15 0.0082 0.72 11.4 0.2 3 23 725 745 723 745 0.97

13 15 9.9e-05 0.0086 17.4 0.5 1 23 751 773 751 774 0.95

14 15 0.011 0.95 11.0 0.0 1 23 784 806 784 806 0.97

15 15 0.024 2.1 9.9 0.0 1 20 1385 1404 1385 1407 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00017	0.015	16.7	0.7	1	23	198	220	198	220	0.95
2	15	0.057	5	8.7	1.2	3	23	228	248	226	248	0.95
3	15	0.00016	0.014	16.8	0.3	1	23	426	448	426	448	0.98
4	15	0.0021	0.18	13.3	0.4	1	23	454	476	454	476	0.98
5	15	6.2e-05	0.0054	18.1	3.7	1	23	508	530	508	530	0.97
6	15	0.015	1.3	10.6	0.3	1	23	551	573	551	573	0.94
7	15	0.013	1.1	10.8	0.8	1	23	579	602	579	602	0.97
8	15	0.46	40	5.9	0.4	5	19	613	627	610	628	0.91
9	15	0.00028	0.024	16.0	5.6	1	23	637	659	637	659	0.97
10	15	0.062	5.4	8.6	1.7	2	23	665	686	664	686	0.97
11	15	8.7e-05	0.0076	17.6	0.2	1	23	695	717	695	717	0.98
12	15	0.0082	0.72	11.4	0.2	3	23	725	745	723	745	0.97
13	15	9.9e-05	0.0086	17.4	0.5	1	23	751	773	751	774	0.95
14	15	0.011	0.95	11.0	0.0	1	23	784	806	784	806	0.97
15	15	0.024	2.1	9.9	0.0	1	20	1385	1404	1385	1407	0.93

Sequence Information

Coding Sequence: ATGGATAATCATGGCTATGGTGGCATACAGTGGATACAACACCACTCGAGTAATCACTCCTCCCATGCCGGAGATATGAAAACTGCTGGTCAGTTGATGATAGATCCTCAGCCGCCACGTGAAGAGGATCTTATGGCCAGTGCAAATTCATCGTCGGACTATATGGCCACAGAGGATGAAGCCGATTCGGCAACTATAGCCCAAATTGCAGctgaaaatctaatttttatggCTCGCGATGGTCAAATGATGAcggaaataataacaaattctaCGACCGATGCAAATGGAACTGTGGTTGTGACTGCCAGCGACGGCGAACAGATTGACTGCGATGCCATTATGGAACAAGCTGCCTTAATACAACAACACGAAGATGCTGGTGGTGGAGTTTATAGTGTGGAGCATTTTAGCGAGAATACACCGCAAATGGTGACGGAAGAGGTCATCACCGATGATTGGGTGCAACATCAAGGGGAAGAAAGAGTTGAAATACCCGCCGAACAAATTATTGGCTCAAGTTCCCAAGTGCTGCTGGACATTGAAGTGCCCCTGCCAACCGTACAAGATGAATACACTGCCCTGCGACCATACCCCTGTGACTTTTGTAGTCGGCGATTTCGCAAAAAAGCCAGTCTAATGAATCATATGGTGGCTCATCAAACGGATCGGCCACATTTGTGTAAATTATGTGGAGCCAGATTTCTAAGGCGACAAGATCtcataaatcatttaaaaggGCATGCAGAAGAGCCCACAGAACCACAAATGGATGATAGTGATTTCATACATTTTGTTACCGACACCACTTCCTCCTCACAACGTACTTCCAACGATCATTACTATGAACAGGATTGGAGTGTACCCGAAGATTCGGTAACCATACCAACAAAATCTAGTCgtaaacatcaacaacaaccgCAACAACTGCAACATATTACCTCCATTTCTAATCAACAAATCATGATGGAAAATACTATAACCTCATCATCCCCCCAAGATGTGCTAACTACTACACAAACTACCACAGCACCGCCTAGGGGACGTATAAGTCGTCTCAAGCCTAAAGAGGACACCTCTTATGTGGTCGAAGTACCCAATAATTGTTCATCAAGTGAAATGATTATCTCCTCGGCTTATAGCATTGTAGAATGTGATACTTTGTCTGCCAGTACGGCAGCCGTTAAACTTTCTCAGGACAATACACCCGCTCTGCATGAAAATGATGAAGAACATAATGTGCTACACTATCCCGTTATAGATGATAGCAAACCATTTGTTTGTCAAGAATGTGGTTTGGCATTTTCCAGGGAAAAAGCCATGCTCTCACATACCAAGACCCATCGTAATGATTCTCCCTTTGAGTGCCCCCAATGCAATGAATTGTTTTGGGATCAAAATAGTTTACAGGATCATCAAAAAACTCATCAGTTTGAAGAAAGCAATTCGGAATATGATCCCAATGAAGGCGAGGATGAAACACAAACCGAATCAGAGTCCGAACAACAATTATATGGTGAATTTTATTGCAGCGAATGTGGCATGTCGTTTCATCGCCAGGATCTTTTAAAAAGGCATTCTAAAAGTCATCCCGCTGGTAATGTGACTATGGGTCAATCTGCACACAATGGCATGGAGAGCAGAGATCAACATTGTTGTAATACTTGTGGAGAAACATTTGCCGAGGCTTTAGATCTGTTGGCGCATGCTGAAATACATGCACGTTACCCGCCCTTTAAatGTGTTTTATGCGGTGAATCTTTTTTCGAGGAAACCACCATCAAAAAACACCTACAGTCTCAGCATCCCAATGAAATCACCGAGAACTCTTGCATCTTGTGTGGCAAAGAGTGTCGAGATCGCAAAGCCTTAATGAAACATGCCTGGGATCATTCGCGAGAAAAATGCCACTCTTGTTCGAAATGTGGTAAAAATTTCCATAACAAGGCACGCCTTAAACGTCATATGGCCTCACATCGTGACAAGTCCGTACAATGTGATGTATGTCACGAAGAATTTCCCGATGGTCGCACTTTATCCAATCACCGCCACTCGCACAGTGCCACTTCGGCGGGTAAACTATTCCCCTGTCTAGAATGTGGTAAAACCTTTGGATCACGGAGTTCCCAACAGATACATGTACGCATTCACACTGGCGAACGACCCTATGGTTGTCGTTTTTGTTGGAAAGCATTTGCCGATGGTGGTACGCTACGAAAGCATGAACGTATTCACACAGGAGAGAAGCCATATGCTTGCTCAGTGTGTCCGCGTGCCTTCAATCAACGTGTTGTGTTGCGCGAGCATATACGTTCGCATCATTCGGGTTTGGATGCCAAAAGAGGCACTTATTATTGTACGGTCTGTGGTGCTGAGTTGTATTCGTCGGGAGATTTGATACAACATTTAATACAACACAGTGATATGAACACAGCAATGCAAAGGCAACCAGTGACTGGTCCTCGGAAATATAAACGTAGACGCAAATTGAAACCTCATGAACTGGCACGACTGAAACGTGAAGTCAAACATAATGGTGGCACTGGAAGTGACATTGATTTATCCGACTTTGATATAGACAATGTAGACGATTTGCTGGCAATGACAACCGACAGCAATACGGCCACTGAAACTGTAGCAACGGTCCATGAACCGTCAATCTCCCAACCAGGAAAGACAAGCAAACGAAAGAACGTCTCAGCCACTCTAAACACTgaaagcaataatactaataaaagtAAAGCAAccattaacaaaaataacaaatcacATATTTTAGAAGATCAAGAAGATTACGATTTAGATGTGGGTATAGATGATGATGAGCTTAAAAAACAACGTTACAACTCTACAAGTAGTGATAAAATTTGGCCCACAAAACAAACCGATGACACCTATAAATCCCTGTTATCGAATTTGGAGACAACTCTTCAAAGTATAGACACTTTAGTAGTGGGTCCATCAACAAAATCCTCCCATACCATAGAAAATAACATGCTGGAAACACAGCAGCGTCAGACAAAGCGTAAAATTAAACAAGAGTCCACCTCGACGGCTCAGAGAACACAACAGGTGCAACTAACAAGAGCAGACAAAGATCCATCTACTGCCACAAATGGCAGAGGTCGTAAAAGTAAAACCGCCACCAAACAAACCAAAGGACCACAAATGATACATACAGAAAAATCAACTACAACCACAACTGACAATGGTGGCGGTTCGGGAACAGGCAAAAAGAAATCTAAATCCATTATAACAAGAACACAAACCACAGCTATAGATTTACTGCCTAAAACTTCGGCCATAGTGGATGATTACGACATTATATCGCCCGCCTTGCAACCGCCCAAACAAATTAGCTCTAGTCCTTTGCATATAAAACAGGAACAAGATAATCACAAACACAACTATCACCATCACCACCATCCACAGCAGCATCATTTAATGAAAAATCCTCCAAATACAAATCACACCACTTCTGCCCGTACCCAGTCAACGACCCGCCACACAAACGCTACTGATCTCTATGATGCTCACTTATTGCTAGAGGCTTCGTGTCTGCGCAGCGAATTAGATGAGATTCTAAGATCACCCTCAAAGTCGTCCAACAAATCAAGGCAACGTTTTACCAGTGAATCCTCTACACAATTTTTAGCTGAACAATCAGAAGAAGAACAACATTTGATAAAAATTGAACCCACATCGCCTGATCTAAGGGAAATTGTTAATGGTGCTAGTTCGGTTAATACTAGTGCAGCACAAGGAGACCTGGAACTGGAAGTTGTATCCACTAAAAGTTGTAGATCTAAATCTTCCAGATCTCAAAGAGCGGTAAATTCAAATcgtaaatatttagaatttaccGGTGATATAAGCCCTACTGAGACCTCCAATTTAAACAAAAGAGCCGCCTCATCACTCTCAACAAAGTCTTCAAAATCTGCCCGCACCGAACCAGACAAATCGGTGCAAAATTCTACAACTTCATATTTAGATTACACCATGGTGGATACATTTAATACGGTTACAAGTTCCTCGGCGAATAATAACAATTCATTTGCTTCTATCTCGGCAGTGGTTTCAGCAGCCGATGCTTCGGCAGCGGCTCAACAAAACTCCTCTGCAGCTGCTGTGCGTAAACCTCAACGTTATTTTGAATGTGAAATGTGCAGCGCCATATTTTCAGATCGTGCTCAGCTATTGGATCATGTGcccatacatatttaa
Protein Sequence: MDNHGYGGIQWIQHHSSNHSSHAGDMKTAGQLMIDPQPPREEDLMASANSSSDYMATEDEADSATIAQIAAENLIFMARDGQMMTEIITNSTTDANGTVVVTASDGEQIDCDAIMEQAALIQQHEDAGGGVYSVEHFSENTPQMVTEEVITDDWVQHQGEERVEIPAEQIIGSSSQVLLDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKASLMNHMVAHQTDRPHLCKLCGARFLRRQDLINHLKGHAEEPTEPQMDDSDFIHFVTDTTSSSQRTSNDHYYEQDWSVPEDSVTIPTKSSRKHQQQPQQLQHITSISNQQIMMENTITSSSPQDVLTTTQTTTAPPRGRISRLKPKEDTSYVVEVPNNCSSSEMIISSAYSIVECDTLSASTAAVKLSQDNTPALHENDEEHNVLHYPVIDDSKPFVCQECGLAFSREKAMLSHTKTHRNDSPFECPQCNELFWDQNSLQDHQKTHQFEESNSEYDPNEGEDETQTESESEQQLYGEFYCSECGMSFHRQDLLKRHSKSHPAGNVTMGQSAHNGMESRDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGESFFEETTIKKHLQSQHPNEITENSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVQCDVCHEEFPDGRTLSNHRHSHSATSAGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDAKRGTYYCTVCGAELYSSGDLIQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHELARLKREVKHNGGTGSDIDLSDFDIDNVDDLLAMTTDSNTATETVATVHEPSISQPGKTSKRKNVSATLNTESNNTNKSKATINKNNKSHILEDQEDYDLDVGIDDDELKKQRYNSTSSDKIWPTKQTDDTYKSLLSNLETTLQSIDTLVVGPSTKSSHTIENNMLETQQRQTKRKIKQESTSTAQRTQQVQLTRADKDPSTATNGRGRKSKTATKQTKGPQMIHTEKSTTTTTDNGGGSGTGKKKSKSIITRTQTTAIDLLPKTSAIVDDYDIISPALQPPKQISSSPLHIKQEQDNHKHNYHHHHHPQQHHLMKNPPNTNHTTSARTQSTTRHTNATDLYDAHLLLEASCLRSELDEILRSPSKSSNKSRQRFTSESSTQFLAEQSEEEQHLIKIEPTSPDLREIVNGASSVNTSAAQGDLELEVVSTKSCRSKSSRSQRAVNSNRKYLEFTGDISPTETSNLNKRAASSLSTKSSKSARTEPDKSVQNSTTSYLDYTMVDTFNTVTSSSANNNNSFASISAVVSAADASAAAQQNSSAAAVRKPQRYFECEMCSAIFSDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01162413; iTF_00975809;
90% Identity: iTF_00259964;
80% Identity: -