Cvic001099.1
Basic Information
- Insect
- Calliphora vicina
- Gene Symbol
- dmd-4
- Assembly
- GCA_958450345.1
- Location
- OY288232.1:13426168-13432799[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-24 1.4e-20 73.9 11.8 1 47 41 87 41 87 0.98 2 2 0.65 5.8e+03 -1.8 0.6 23 31 320 328 318 333 0.71
Sequence Information
- Coding Sequence
- ATGTCTTCTTTAGTGACTGCAAAGGATTCTTCTTGTGCGACATCTTTGGTTGGTAAAAAACCACGCAAATCCTTGAAATCTTTGGTGGCGGATAGTTTGCCTAGCAAAGCAGCTACAAATCGGGTGCCGAAATGTGCTCGTTGCCGTAATCATGGCTGGATATCGGAGTTACGGGGCCATAAGAAACATTGTACTTATAAGAATTGTCGTTGTGCCAAATGTGTGTTGATTTTTGAGAGGCAGAGGATAATGGCTGCTCAGGTAGCCCTTAAGCGTCAACAGGCTGTGGAAGATGCCATTGCTTTGCGTTTGGTGGCCACTAAAACTGGCCAACAAATGGACACTCTACCTCCAGGCAATATATTCGATTTGGCTGAAAATCTTCAGGACCTTAAAAAGTCTGCAGCTTCACAACAACAGCAAGATTGTGTGGAAGATTTAAGTTTGCCCAGCAAACAGCCAGAGTCATTGcagaaaactaaaataaatatagaagATTCTACCCCAACTATAGCCACCACAATCACAACATCCGCATCTACTCCTATTACCAGCCTATCATCTTCTTCTGCAGATGCCAAAGTTTCACAAAATGCCATTGATATGTTGGCCCAGCTGTTCCCCCAAAGAAAACGAGCCGTCTTGGAATTAGTTCTGAAGCGTTGTGATTCGGATTTGGTTAAGGCCATAGAGAATATTTCCGCATCATATAAGGATCATCGGGGAGAATCAGTTGAGGTTGATGTTGATCAAATGGCAGGAAATGTTATGAAAAGTGCTTTTAAACCGGTTTATGGTTCGGGGAATATgCACCCCAAACCCTTAACCCTGGGCAACACTTTATGCTCCACTGCTACCGCATATCCCAAATGGTTTGTGCCCCTAACATTTCCCATCACCTTTCAGGGTCATTTAGCGCCTGCATTACCAACCACCTCCCTACCGCCACTCACTTCACGTTGTACTCTGCCGAATTGTGCGTGTTTGGAGGGCTATCAATTTAATTGTTCATAA
- Protein Sequence
- MSSLVTAKDSSCATSLVGKKPRKSLKSLVADSLPSKAATNRVPKCARCRNHGWISELRGHKKHCTYKNCRCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVATKTGQQMDTLPPGNIFDLAENLQDLKKSAASQQQQDCVEDLSLPSKQPESLQKTKINIEDSTPTIATTITTSASTPITSLSSSSADAKVSQNAIDMLAQLFPQRKRAVLELVLKRCDSDLVKAIENISASYKDHRGESVEVDVDQMAGNVMKSAFKPVYGSGNMHPKPLTLGNTLCSTATAYPKWFVPLTFPITFQGHLAPALPTTSLPPLTSRCTLPNCACLEGYQFNCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00259789; iTF_00045368; iTF_00199904;
- 90% Identity
- iTF_00045368;
- 80% Identity
- -