Basic Information

Gene Symbol
dmd-4
Assembly
GCA_950370525.1
Location
OX493264.1:8684616-8689549[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-24 1.3e-20 73.8 11.8 1 47 44 90 44 90 0.98
2 2 0.69 5.7e+03 -1.9 0.6 23 31 327 335 325 339 0.72

Sequence Information

Coding Sequence
ATGTCTTCTTTAGTGATTTCAGCCGCCACAAAGGATTCATCGTCTGTATCGTCTGCGGTTGGCAAAAAATCACGCAAATCTTTGAAATCTTTCGTCGCGGAAGGTTTGCCTAGTAAGGGTTCCACAAATCGGGTACCGAAATGTGCTCGTTGTCGTAATCATGGCTGGATATCAGAGTTACGGGGCCATAAGAAACACTGTACGTATAAGAATTGTCGTTGTGCCAAGTGTGTGTTGATTTTCGAGAGACAGAGGATAATGGCGGCTCAGGTAGCCCTTAAGCGTCAGCAGGCTGTGGAAGATGCCATTGCTTTGCGTTTGGTGGCCACTAAGACTGGCCAACAAATGGACACACTACCTCCCGGCAATATATTTGATTTGGCTGAAAATCTGCAAGACATTAAAAAGGCTGCGGCctcacaacagcaacaacaagacACTGTGGAGGATTTAAGTTTACCCAGTAAACAGGCAGATGCATtgaaaaaaagttctttaattaacaaaatcaatGTTATAGATTCTAATACAACTGTATGTACAACAGCTGCCTCTACTCCTATTAACAGCCTATCATCTTCTACTTCAACTTCATCTTCTGCCAAAGTCTCTCAAAATGCCATTGATATGCTGGTTCAGCTATTTCCTCAGAGAAAGCGTGCCGTCTTGGAATTGGTCCTGAAGAGATGTGATTCGGATCTGGTTAAGGCCATAGAGAATATTTCCGCGTCGTATAAAGATCATCAGGAGGAAGTTGATGTTGATGTCAATCGAATAGGTGCCAGTGTTATGAAAAGTGCTTTTACACCGGTTTATGGTTCGGGAAATATGCACCCTAAACCTTTAACTCTTGGCAGTACATTATGCTCCACGGCAAGCGCATATCCCAAATGGTTTGTGCCTCTCACATTTCCCATCACCCTTCAGGGTCATCTGGCGCCAGCTTTACCACCCAACTCCCTACCACCACTCACTTCACGTTGTACTCTGCCAAATTGTGCCTGTTTGGAGGGTTATCAATTTAATTGTTCGTAA
Protein Sequence
MSSLVISAATKDSSSVSSAVGKKSRKSLKSFVAEGLPSKGSTNRVPKCARCRNHGWISELRGHKKHCTYKNCRCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVATKTGQQMDTLPPGNIFDLAENLQDIKKAAASQQQQQDTVEDLSLPSKQADALKKSSLINKINVIDSNTTVCTTAASTPINSLSSSTSTSSSAKVSQNAIDMLVQLFPQRKRAVLELVLKRCDSDLVKAIENISASYKDHQEEVDVDVNRIGASVMKSAFTPVYGSGNMHPKPLTLGSTLCSTASAYPKWFVPLTFPITLQGHLAPALPPNSLPPLTSRCTLPNCACLEGYQFNCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00258902;
90% Identity
-
80% Identity
-