Basic Information

Insect: Calephelis virginiensis
Gene Symbol: -
Assembly: GCA_002245475.1
Location: NJDC01002002.1:49742-69630[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.049 31 5.3 1.3 18 30 91 104 81 112 0.76

2 16 0.005 3.1 8.5 2.8 6 38 108 140 107 141 0.73

3 16 0.16 1e+02 3.7 5.2 5 34 135 160 132 175 0.82

4 16 0.0041 2.6 8.7 5.8 18 38 175 196 160 199 0.87

5 16 0.033 21 5.8 2.8 6 32 192 218 191 225 0.75

6 16 0.031 20 5.9 2.4 6 32 216 246 214 252 0.72

7 16 0.026 16 6.2 3.1 5 38 247 280 243 281 0.78

8 16 0.0019 1.2 9.8 0.7 5 38 275 308 273 315 0.84

9 16 0.09 57 4.5 6.6 13 38 310 336 303 342 0.80

10 16 0.042 27 5.5 5.8 13 38 338 364 331 365 0.79

11 16 0.94 6e+02 1.2 1.7 17 39 370 389 365 399 0.75

12 16 0.0028 1.8 9.3 5.1 4 38 386 421 383 424 0.84

13 16 0.011 7.1 7.4 1.0 5 33 416 444 414 449 0.81

14 16 0.017 11 6.7 2.9 6 33 445 472 443 478 0.77

15 16 0.0005 0.32 11.7 6.0 6 38 473 505 472 512 0.86

16 16 0.061 39 5.0 1.7 18 38 512 533 507 533 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.049	31	5.3	1.3	18	30	91	104	81	112	0.76
2	16	0.005	3.1	8.5	2.8	6	38	108	140	107	141	0.73
3	16	0.16	1e+02	3.7	5.2	5	34	135	160	132	175	0.82
4	16	0.0041	2.6	8.7	5.8	18	38	175	196	160	199	0.87
5	16	0.033	21	5.8	2.8	6	32	192	218	191	225	0.75
6	16	0.031	20	5.9	2.4	6	32	216	246	214	252	0.72
7	16	0.026	16	6.2	3.1	5	38	247	280	243	281	0.78
8	16	0.0019	1.2	9.8	0.7	5	38	275	308	273	315	0.84
9	16	0.09	57	4.5	6.6	13	38	310	336	303	342	0.80
10	16	0.042	27	5.5	5.8	13	38	338	364	331	365	0.79
11	16	0.94	6e+02	1.2	1.7	17	39	370	389	365	399	0.75
12	16	0.0028	1.8	9.3	5.1	4	38	386	421	383	424	0.84
13	16	0.011	7.1	7.4	1.0	5	33	416	444	414	449	0.81
14	16	0.017	11	6.7	2.9	6	33	445	472	443	478	0.77
15	16	0.0005	0.32	11.7	6.0	6	38	473	505	472	512	0.86
16	16	0.061	39	5.0	1.7	18	38	512	533	507	533	0.90

Sequence Information

Coding Sequence: ATGCAGCGCCCGCGCCGTCCACCTACCCTCTCTTGCGTCTACGAGGCGTATGATTCCAAGAGTATCAAAATGTCTCCTAACTTTTTATTGTGTCCATGGAGTTCATATGATACCTTCAAGCGTTATCACGGCGAAAGTAAACCATATACATGTCAAGTTTGCGGATCTGCGTTTGCCAATCCTGTCGAACTTTCGAGACATGGAAAGTGCCATTTAGCGGGCGACCCAGCAGAGCGGCAGGCGAAGAGAATGGCCCAGGACAAACCCTACGCGTGCACCACTTGCCACAAAACGTTCTCCAGGAAGGAACACCTCGACAACCACGTCAGAAGTCACACGGGGGAAACTCCTTACAGATGTCAATATTGTGCGAAAACATTCACGCGCAAAGAACACATGGTGAATCACGTGAGAAAACACACGGGAGAAACTCCACACAGGTGTGAAATATGTAAGAAGAGCTTCACGCGGAAAGAACACTTCATGAACCATGTTATGTGGCATACAGGTGAAACGCCCCATCATTGTCAAATATGCGGAAAGAAGTATACTAGGAAGGAGCACTTAGTGAACCATATGAGATCTCACACAAATGACACGCCGTTCAGGTGTGAACTGTGCGGCAAGTCCTTCACGAGGAAGGAACATTTCACCAATCACATACTGTGGCATACGgGTGAAACACCACATCGGTGTGACTTCTGCTCGAAAACATTCACACGTAAGGAGCATCTCCTGAACCACGTGCGACAACACACGGGCGAGTCTCCGCACCGGTGCAACTTCTGCGCCAAGTCGTTCACTCGGCGCGAGCATCTCGTCAACCACGTGCGCCAACACACTGGCGAGACGCCCTTCCAATGTGGATACTGTCCCAAAGCGTTCACTAGGAAGGATCatttagTAAACCACGTGCGACAGCACACGGGCGAGTCTCCGCACAAGTGCTCGTACTGCACGAAGTCTTTCACCCGCAAGGAGCACTTGACAAACCACGTGCGGCAGCACACGGGGGAGTCGCCCCACCGCTGCACCTACTGCGCTAAATCCTTCACCAGGAAGGAGCATCTCACCAACCACATACGACAACATACGGGGGAGACTCCATACAAATGCACGAGCTGTCAGCGTGCTTTTACGCGGAAGGAACATCTCAAGAGCCATCTCCTTACCCACTCCGGTGCCTCTACAACCCATCAGTGCAACTATTGCAACAAGAGCTTCGTAAGAAAAGAACATCTCGTCAATCATGTCCGACAACACACAGGCGAGACTCCTTTCAAGTGCACGTTTTGTCCCAagtctttttcaagaaaggaaCATCTAACGAATCACGTCCATCTGCACACAGGCGAGACTCCACACAAGTGCCCATTTTGTACGAAAACATTCTCAAGAAAGGAGCATCTAACAAACCACGTCAGAATCCACACAGGCGAGTCGCCGCACAGGTGCGACTTTTGCCACAAAACCTTCACACGAAAAGAACATTTGACAAATCATTTGAAACAACACACGGGCGACACGCCGCACTCGTGCAAAACTTGCTCCAAGCCATTCACTAGGAAGGAACACCTCATCACACACATgagatCCCATAGTTGCGGCGAACGTCCTTTCAGTTGTGGCGAGTGTGGGAAATCGTTCCCTCTCAAAGGTAACCTGTTGTTCCACGAGAGGTCCCATAACAAGGCTGCCAACACTAGACCTTACCGCTGTGATATATGTTTTAAGACTTTTATGTGTAAAGGGCACCTCGCCACCCACCGCCGGACGCACGCCGACGCGGCCGGGCCGGGGGCGGAGGGCGCGCCGGCCGAGGGGGCGGGGGCGGACGAGCCCTGCGCCGACATCGACAAGTGCGCCAAGGACGACGTCGACAGGAAACCCGTGCTCAGGGAACCATCTGAGAGCAGAACTACAGACAGCAACATCACGCAAAACACCCAAACCAACGCCACTGTAATGCAGATACAAAATTCGCAGGTTCGGTCAGCGGCGGCAGGGCCGAATGTCCCCGAGGCCTTCGCGGCGTCGGCAGCGGGCGCGCATCACACCGTCTCCGTCACGTACTAG
Protein Sequence: MQRPRRPPTLSCVYEAYDSKSIKMSPNFLLCPWSSYDTFKRYHGESKPYTCQVCGSAFANPVELSRHGKCHLAGDPAERQAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPYKCTSCQRAFTRKEHLKSHLLTHSGASTTHQCNYCNKSFVRKEHLVNHVRQHTGETPFKCTFCPKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCHKTFTRKEHLTNHLKQHTGDTPHSCKTCSKPFTRKEHLITHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKAANTRPYRCDICFKTFMCKGHLATHRRTHADAAGPGAEGAPAEGAGADEPCADIDKCAKDDVDRKPVLREPSESRTTDSNITQNTQTNATVMQIQNSQVRSAAAGPNVPEAFAASAAGAHHTVSVTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00256177;
90% Identity: iTF_00257145;
80% Identity: iTF_00257145;