Cnem010745.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Calephelis nemesis
Gene Symbol
-
Assembly
GCA_002245505.1
Location
NJDD01001289.1:46119-76848[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 6e-05 0.0051 17.8 1.5 1 23 32 54 32 54 0.96
2 21 0.0021 0.18 13.0 0.6 1 20 60 79 60 82 0.94
3 21 1.5e-05 0.0012 19.7 5.6 1 23 101 123 101 123 0.98
4 21 2.6e-05 0.0022 19.0 4.6 1 23 129 151 129 151 0.99
5 21 2.5e-05 0.0021 19.0 5.3 1 23 157 179 157 179 0.97
6 21 8e-06 0.00067 20.6 7.3 1 23 185 207 185 207 0.97
7 21 5e-07 4.2e-05 24.4 2.9 1 23 213 235 213 235 0.97
8 21 7.1e-05 0.006 17.6 6.7 1 23 241 263 241 263 0.97
9 21 0.00016 0.014 16.5 5.6 1 23 269 291 269 291 0.97
10 21 1.2 1e+02 4.3 0.8 1 11 297 307 297 311 0.88
11 21 1.1e-06 8.9e-05 23.3 2.3 1 23 318 340 318 340 0.98
12 21 6.7e-06 0.00057 20.8 7.7 1 23 346 368 346 368 0.98
13 21 8.1e-06 0.00068 20.6 3.8 1 21 374 394 374 395 0.96
14 21 8.1e-06 0.00068 20.6 3.8 1 21 403 423 403 424 0.96
15 21 8.6e-05 0.0073 17.3 2.0 5 23 436 454 435 454 0.96
16 21 7.1e-06 0.0006 20.7 4.5 1 23 460 482 460 482 0.99
17 21 3.2e-06 0.00026 21.8 5.3 1 23 489 511 489 511 0.98
18 21 1.8e-05 0.0015 19.5 6.2 1 23 517 539 517 539 0.97
19 21 2.1e-06 0.00018 22.4 6.0 1 23 545 567 545 567 0.98
20 21 0.00051 0.043 14.9 0.3 1 23 583 605 583 605 0.96
21 21 0.0069 0.58 11.3 6.4 1 23 614 636 614 636 0.99

Sequence Information

Coding Sequence
ATGTACGTTTCCATATTTGAGGTGATAAGCGAAGTGGAGGTGGAGGCGGGCACGAGCGCGGCGCTGGCGGAGGCGGAGGGCTCGCCGGGCCAGCACGCCTGCGACATCTGCGGGAAGATATTCCAGTTCCGGTACCAGCTCATCGTGCACAGGCGTTATCACGGCGAAAGTAAACCATATACTTGCCAAGTTTGCGGATCTGCATTTGCCAATCCTGTCGAACTTTCGAGACATGGAAAGTGCCATTTAGCGGGCGACCCAGCAGAGCGGCAGGCGAAGAGAATGGCCCAGGACAAACCGTACGCGTGCACCACTTGCCACAAGACCTTCTCCAGGAAGGAACACCTCGACAACCATGTCAGAAGTCACACGGGGGAAACTCCTTACAGATGTCAATATTGTGCGAAAACGTTCACGCGCAAAGAACACATGGTGAATCACGTGAGAAAACACACGGGAGAAACTCCGCACAGGTGTGAGATATGTAAGAAGAGTTTCACGCGGAAAGAACACTTCATGAACCATGTTATGTGGCATACAGGTGAAACGCCCCATCATTGTCAAATATGCGGAAAGAAGTATACTAGGAAGGAGCACTTAGTGAACCATATGAGATCTCACACAAATGACACGCCGTTCAGGTGTGAACTGTGCGGCAAGTCCTTCACGAGGAAGGAACATTTCACCAATCACATACTGTGGCATACgggtGAAACACCACATCGTTGTGACTTCTGCTCGAAAACATTCACACGTAAGGAGCATCTCCTGAACCACGTGCGACAACACACGGGCGAGTCTCCGCACCGGTGCAACTTCTGCGCCAAGTCGTTCACTCGCCGCGAGCATCTCGTCAACCACGTGCGCCAACACACCGGCGAGACGCCCTTCCAATGTGGATACTGTCCCAAAGCATACTTCCACGTGAACCAACACACCGGCGAGACGCCCTTCCAATGTGGATACTGTCCCAAAGCGTTCACTAGGAAGAATCATTTAGTAAACCACGTGCGCCAGCACACGGGCGAGTCTCCGCACAAGTGCTCGTACTGCACGAAGTCGTTCACCCGCAAGGAGCACCTCACCAACCACGTGCGGCAGCACACGGGCGAGTCGCCCCACCGCTGTACCTACTGCGCCAAGTCCTTCACCAGGAAGGAGCATCTCACCAACCACATACGGTACATTACCTACATTATATCGCCCCACCGCTGTACCTACTGCGCCAAGTCCTTCACCAGGAAGGAGCATCTCACCAACCACATACGGTACATTACCTACATTATATCGGGCCACCGCCTCACCTACTGCGCCAAGTCCTTCACCAGGAAGGAGCATCTAACCAACCACATACGACAGCATACGGGAGAGACTCCATACAAATGCACGAGCTGTCAGCGTGCTTTCACGCGGAAGGAACATCTCAAGAGCCATCTCCTTACCCACTCCGGTGCCTCTACAACCCATCAGTGCAACTATTGCAACAAGAGCTTCGTAAGAAAAGAACATCTCGTCAATCATGTCCGaCAACACACAGGCGAGACTCCGTTCAAGTGCACATTTTGTCCCAagtctttttcaagaaaggaaCATCTAACGAATCACGTCCATCTACACACAGGGGAGACTCCACACAAGTGCCCATTTTGTACGAAAACATTCTCAAGAAAGGAGCATCTAACAAACCACGTCAGAATCCACACAGGCGAGTCGCCGCATAGatCCCATAGTTGCGGCGAACGTCCTTTCAGTTGTGGCGAGTGTGGGAAATCGTTCCCTCTCAAAGGTAACCTGTTGTTCCACGAGAGGTCCCATAACAAGGCTGCCAACACTAGACCTTACCGCTGTGATATATGTTTTAAGACTTTTATGTGTAAAGGGCACCTGGCGACGCACCGCCGGACGCACGCCGCCGCGGCCGGGGCGGGCGCGGAGGGTGCGGGCGCGGGGCCGGAGGGGGAGGGGGAGGGGGCGGACGAGCCCTGCGCCGACATCGACAAGTGCGCCAAGGACGACGTCGACAGGAAACCAGTGCTCAGagaaTCATCAGAGAGCAGAACTACAGACAGCAACATTACGCAAAATACCCAAACCAACGCCACTGTTATGCAGATACAAAATTCGCGCAGTGGTCAGTCTCATCTGCTATTGCTTTTGTTTCCCCCCTCCCCCGTGCGCAAACACAATTTCCACCTTGTAGAATCTCAATTGCCTTCCGCAAGTTTGTTGTGTGTTTTGAAGACATTTAGAAGTTACATTGTGAGCATTGCAGGTTCGATCAGCGACGGCAGGGTCGAGTGTGTCCGAGCCGTTCTCGGCGTCCCACACCGTCTCCGTCACCTACTAGCGTCCGCCCGCGCTCCCGCACACCAGAGACATGCCCGTCTTGTGACCGCAGAGGTATTTCCTATACCTCACTCTGTTATTGAAGTCGGATTCATGTAA
Protein Sequence
MYVSIFEVISEVEVEAGTSAALAEAEGSPGQHACDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGSAFANPVELSRHGKCHLAGDPAERQAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAYFHVNQHTGETPFQCGYCPKAFTRKNHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRYITYIISPHRCTYCAKSFTRKEHLTNHIRYITYIISGHRLTYCAKSFTRKEHLTNHIRQHTGETPYKCTSCQRAFTRKEHLKSHLLTHSGASTTHQCNYCNKSFVRKEHLVNHVRQHTGETPFKCTFCPKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKAANTRPYRCDICFKTFMCKGHLATHRRTHAAAAGAGAEGAGAGPEGEGEGADEPCADIDKCAKDDVDRKPVLRESSESRTTDSNITQNTQTNATVMQIQNSRSGQSHLLLLLFPPSPVRKHNFHLVESQLPSASLLCVLKTFRSYIVSIAGSISDGRVECVRAVLGVPHRLRHLLASARAPAHQRHARLVTAEVFPIPHSVIEVGFM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00257145; iTF_00257138;
90% Identity
-
80% Identity
-