Cpal006864.1
Basic Information
- Insect
- Calameuta pallipes
- Gene Symbol
- Sub1
- Assembly
- GCA_030142375.1
- Location
- JARQSW010000427.1:2208030-2208608[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.26 5.3e+03 -2.8 0.7 27 37 36 46 32 46 0.68 2 2 2.1e-27 4.3e-23 80.8 0.2 1 51 59 110 59 111 0.96
Sequence Information
- Coding Sequence
- ATGCCTAAGTCAAAGGCATATGTCTCAAGCTCATCATCCAGTTATGATACTGACGAGgaagtaaaggaaaaaacttctaagaaaaataacaagagGCAAGcgccagaaaaaaaagaaaagcctgCACCAAGCAAAAAGGCAAAGCAAGAAccagatgaagatgaagatccAGTTTGGGAATTAGGAAACAATCGACGAGTGACTGTGCGTGAATTTAAGGGGAATATGTATGTCGACATTAGAGAAATGTATCTTGATAATAGTGGAGACCTGAAACCAGGAAAGAAAGGTATAGCACTCAACATGATCCAATGGAGAAAATTTGTCTCTCTCGTTGAAGATATTGACCGTGTTGCTAAGTCCAAATGTTAA
- Protein Sequence
- MPKSKAYVSSSSSSYDTDEEVKEKTSKKNNKRQAPEKKEKPAPSKKAKQEPDEDEDPVWELGNNRRVTVREFKGNMYVDIREMYLDNSGDLKPGKKGIALNMIQWRKFVSLVEDIDRVAKSKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00292959;
- 90% Identity
- iTF_01475462;
- 80% Identity
- -