Basic Information

Insect: Cacoxenus indagator
Gene Symbol: -
Assembly: GCA_035041755.1
Location: JAWNKX010000315.1:2068829-2073860[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.1e-05 0.0026 18.3 1.7 1 23 233 255 233 255 0.97

2 18 7.3e-06 0.00062 20.3 0.4 1 23 261 283 261 283 0.97

3 18 0.0008 0.068 13.9 0.5 1 23 289 311 289 311 0.95

4 18 1.6e-05 0.0013 19.3 3.1 1 23 317 339 317 339 0.97

5 18 3.5e-05 0.003 18.2 4.7 1 23 345 367 345 367 0.99

6 18 6.5e-05 0.0055 17.3 5.7 1 23 373 395 373 395 0.97

7 18 3.2e-07 2.7e-05 24.6 4.3 1 23 401 423 401 423 0.98

8 18 1.1e-07 9.6e-06 26.0 2.4 1 23 429 451 429 451 0.97

9 18 6.6e-05 0.0056 17.3 6.7 1 23 457 479 457 479 0.97

10 18 0.00011 0.0097 16.5 6.5 1 23 485 507 485 507 0.98

11 18 1e-05 0.00087 19.8 4.5 1 23 513 535 513 535 0.98

12 18 7.4e-06 0.00063 20.3 8.1 1 23 541 563 541 563 0.98

13 18 5.8e-06 0.00049 20.6 7.8 1 23 569 591 569 591 0.97

14 18 6.8e-07 5.7e-05 23.6 7.7 1 23 597 619 597 619 0.98

15 18 3.8e-05 0.0032 18.1 6.9 1 23 625 648 625 648 0.97

16 18 7.5e-05 0.0064 17.1 0.9 1 23 654 676 654 676 0.98

17 18 0.00026 0.022 15.4 4.5 1 23 686 708 686 708 0.98

18 18 9.4e-06 0.00079 20.0 1.6 1 23 714 737 714 737 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.1e-05	0.0026	18.3	1.7	1	23	233	255	233	255	0.97
2	18	7.3e-06	0.00062	20.3	0.4	1	23	261	283	261	283	0.97
3	18	0.0008	0.068	13.9	0.5	1	23	289	311	289	311	0.95
4	18	1.6e-05	0.0013	19.3	3.1	1	23	317	339	317	339	0.97
5	18	3.5e-05	0.003	18.2	4.7	1	23	345	367	345	367	0.99
6	18	6.5e-05	0.0055	17.3	5.7	1	23	373	395	373	395	0.97
7	18	3.2e-07	2.7e-05	24.6	4.3	1	23	401	423	401	423	0.98
8	18	1.1e-07	9.6e-06	26.0	2.4	1	23	429	451	429	451	0.97
9	18	6.6e-05	0.0056	17.3	6.7	1	23	457	479	457	479	0.97
10	18	0.00011	0.0097	16.5	6.5	1	23	485	507	485	507	0.98
11	18	1e-05	0.00087	19.8	4.5	1	23	513	535	513	535	0.98
12	18	7.4e-06	0.00063	20.3	8.1	1	23	541	563	541	563	0.98
13	18	5.8e-06	0.00049	20.6	7.8	1	23	569	591	569	591	0.97
14	18	6.8e-07	5.7e-05	23.6	7.7	1	23	597	619	597	619	0.98
15	18	3.8e-05	0.0032	18.1	6.9	1	23	625	648	625	648	0.97
16	18	7.5e-05	0.0064	17.1	0.9	1	23	654	676	654	676	0.98
17	18	0.00026	0.022	15.4	4.5	1	23	686	708	686	708	0.98
18	18	9.4e-06	0.00079	20.0	1.6	1	23	714	737	714	737	0.96

Sequence Information

Coding Sequence: ATGCAACACGTTAGCGCTTCGAGCGCAGCATCATCGGTGGTAACACCCGTGGTGACAACTGGTGGCGGGACCACAATCACATTGGGAGGCCCACCGCCAATTATGACAAAGACGGAAATTAAAGATGATAGCAAACCGCCCGCACACGGTATAGAAATGTATAAAGTCAATATCGAAGATATTTCACAATTGTTCACGTATCACGAAGTATTTGGCAAAATACACGGTGATGTGGTCAATCATCCATTGGCAGCACATGGCGGGCAATtgccgccaccaccgccattACCCCCACAGGGTCATAGTAGTGCAGtaaatgcagcagcagcagcagtagctgCAGCATCGACAAATAATGCAGCTGTTGCTGCGGTCATGGCAACAGCGAATGCCGCcgcggcagcagcagctgcagccTCAGCGAGCGCCAAtgggcaacaacagcaacaaggtggccaacagcagcagcaaccaccTGTGACAACGGCGACGACTACTGGTAGCGGTACACAACATACGACAGCATCGACGGTAACTACAAGCGGCGGCGACGGTAGTGCTGGCAGTACTGGCGGTGTGGGTACGCTACCTGGTGGTTTGCTTATGCCCAAAATGGAGGGCGGCCTGCAAGGTGTCGATGGTCAAACGACAACAGTTACACTCGCACCGGATGGCACGCCCATTGCAACGGGTACACATGTTTGTGACATATGTGgcaaaattttccaatttcgTTATCAACTGATCGTGCATCGTCGCTATCACAGCGAACGTAAGCCGTTCATGTGTCAGGTGTGCGGACAGGGCTTTACAACATCGCAGGATTTGACGCGACATGGCAAAATCCATATTGGCGGGCCGATGTTCACGTGCATCGTATGCTTCAACGTGTTTGCGAATAATGCCAGTTTGGAGCGTCACATGAAACGCCATTCGACGGATAAACCGTTTGCGTGTACCATTTGTCAGAAGACATTCGCACGTAAAGAACATTTGGATAATCATTTTCGCTCGCACACGGGCGAGACACCGTTCCGATGTCAATATTGCGCCAAGACATTCACACGCAAGGAGCACATGGTCAATCATGTGCGTAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCTTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGgACAAACACCGCATCAGTGCGATGTATGCGGCAAGAAATATACGCGCAAGGAGCATCTTGCGAATCATATGCGTTCGCATACCAACGATACGCCGTTCCGTTGTGAGATCTGTGGCAAAAGTTTCAGCCGTAAGGAGCACTTCACCAATCACATACTCTGGCATACAGGTGAGACACCCCATCGTTGTGACTTTTGCTCGAAGACGTTCACACGCAAGGAACATTTGTTAAATCACGTACGTCAACACACCGGCGAATCGCCGCATCGCTGTTCATACTGCATGAAGACGTTCACACGCAAGGAGCATCTGGTCAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACGCGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACCTATTGCACAAAGACGTTCACGCGCAAGGAGCACCTGACGAATCATGTGCGCCAACATACGGGCGACTCGCCGCATCGATGCACCTACTGCAAGAAGACGTTCACACGCAAGGAACACTTGACCAATCATGTGCGCCTGCATACGGGTGATTCGCCGCACAAGTGCGAATATTGCCAGAAGACGTTTACGCGCAAGGAGCATCTCAACAATCATATGCGTCAGCATTCAAGCGATAATCCGCATACGTGCAACGTATGCAGTAAACCGTTTACGCGCAAAGAACATCTCATCAATCATATGTCGCGGTGTCATACTGGCGATCGACCGTTTACATGCGAGACATGCGGTAAATCGTTCCCGCTGAAGGGCAATTTGCTCTTCCATCAGCGAAGTCACACGAAGGGACAGGATTGCGAGCGGCCGTTTTCGTGCGAGAAGTGCCCCAAGACGTTCATATGTAAAGGTCACTTAGTGTCACATATGCGTTCACATTCGGGTGAAAAGCCGCACGCTTGCACGTTGTGCAGCAAAGCGTTTGTCGAGCGCGGCAATTTGAAACGTCACATGAAAATGAATCATCCGGATGCAATGATGCCACCACCACCAGTGCATCCGCATCCGCAAATACCCGCTGGCGTTTTAACGCAAGTGAAACAAGAAGTCAAACCGATCATAATACCCCATCAAGCGGCGACAATGCACACCATACAGCAAATAACCGCCGGCGCTGGCGCCCAGGCTGTGCAATTGACTCCCGGTCTGGTGCCGTTGGTGACATCGACGCTCATTTCGCACAATAGTCAAacacaaaagcagcagcagcagcaacaacaacagcagcagcagcaacaacaacagcagcagcagcagcagcagcaacaacaacagcagcagcagcagcaacaacaacagcagcagcaacaagcacatcaacaacatcagcaacatgttgtacaacaacaacaagcagcagctgcagctgctgcagcGGCAGCcgcacatcaacaacagcagcagcagttgcaacagcagcaacaattgtTGCAACTATCGATACAACAGGCagctcatcatcatcagcagcagcaacaacaacaacaacaacagcaacaagagcaacatcgccagcatcaacatcaccaAGCggcgcaacaacagcaacaacaacatcaacaggcgccaccaccgccacagcaacaacaacaaccgccaCCACAAGTGCCTATCGCACTAATTAGCGATCCCAGCGCGTTGGCACGTGCGGCCATGCAGCTGCAACATTTGCCAGCCAATGTAGAACAACATCCGGTGGTTTACTAA
Protein Sequence: MQHVSASSAASSVVTPVVTTGGGTTITLGGPPPIMTKTEIKDDSKPPAHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHPLAAHGGQLPPPPPLPPQGHSSAVNAAAAAVAAASTNNAAVAAVMATANAAAAAAAAASASANGQQQQQGGQQQQQPPVTTATTTGSGTQHTTASTVTTSGGDGSAGSTGGVGTLPGGLLMPKMEGGLQGVDGQTTTVTLAPDGTPIATGTHVCDICGKIFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCTYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHTCNVCSKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQDCERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHQAATMHTIQQITAGAGAQAVQLTPGLVPLVTSTLISHNSQTQKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAHQQHQQHVVQQQQAAAAAAAAAAAHQQQQQQLQQQQQLLQLSIQQAAHHHQQQQQQQQQQQQEQHRQHQHHQAAQQQQQQHQQAPPPPQQQQQPPPQVPIALISDPSALARAAMQLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_01364076;
80% Identity: -