Bdap018650.2
Basic Information
- Insect
- Brenthis daphne
- Gene Symbol
- -
- Assembly
- GCA_947093115.1
- Location
- OX352474.1:7647562-7657547[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0035 0.26 12.2 1.0 3 23 209 230 208 230 0.96 2 22 0.25 19 6.4 0.3 1 22 622 643 622 643 0.95 3 22 4.8 3.7e+02 2.3 0.3 1 22 685 706 685 708 0.82 4 22 0.18 14 6.8 2.5 1 21 717 737 717 738 0.92 5 22 0.099 7.6 7.6 1.1 3 21 788 806 786 809 0.93 6 22 0.025 1.9 9.5 4.3 1 23 815 838 815 838 0.95 7 22 0.23 17 6.5 0.0 1 23 864 887 864 887 0.90 8 22 0.013 1 10.3 3.4 1 23 892 914 892 914 0.97 9 22 0.007 0.53 11.2 0.2 1 23 920 943 920 943 0.95 10 22 0.00012 0.0088 16.8 1.3 1 23 955 977 955 977 0.97 11 22 0.001 0.079 13.8 4.0 1 23 1020 1043 1020 1043 0.96 12 22 0.0031 0.23 12.4 1.6 1 23 1103 1126 1103 1126 0.96 13 22 0.00073 0.056 14.3 2.1 2 23 1151 1173 1150 1173 0.95 14 22 0.062 4.8 8.2 0.1 2 23 1179 1201 1178 1201 0.93 15 22 0.058 4.4 8.3 0.1 1 21 1245 1265 1245 1266 0.94 16 22 0.00088 0.067 14.0 0.6 1 23 1276 1298 1276 1298 0.93 17 22 0.00019 0.015 16.1 0.4 2 23 1387 1409 1387 1409 0.93 18 22 1.3e-07 9.8e-06 26.1 1.1 3 23 1416 1436 1415 1436 0.98 19 22 0.007 0.54 11.2 0.1 1 23 1453 1476 1453 1476 0.94 20 22 0.13 10 7.2 0.0 1 23 1496 1518 1496 1518 0.97 21 22 0.02 1.5 9.8 0.6 1 23 1524 1547 1524 1547 0.95 22 22 0.00023 0.017 15.9 0.7 1 23 1555 1578 1555 1578 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAATTATGACCGTGTTTGTAGACTGTGCTTGTCATCTCGATGCGAATTACTACCGATATTTCCTACCACCAGTTCGGATGACTCTGAACCTCCTGTCCTCGCTTCGAAAATCAAAGATTGCGTGTCAGTGCAGATAAGCGAAAATGACGACCTGCCAACTAATGTTTGTAGGAAATGCATGGACAATGTAAATAACTGGCACATTTTTAAAACCATATGTGAAAGGACACAAAACAAGTTACAGTCTCTGATTAATAAGGAGAGCAACCTACTAGAAGAGGTAAAAATAAAAAATGAACCATTATCAGATGAAGCTTATGATGATGGAGTGGTTATTGATGGATCATATCCTGACATTGAGAACAATGGGCCATCACATAAAGTGCAGCCTGAAGGTCCACCAATATTGGCTTCATTGGGACTCACACCGAGGAGTGATAAGGGCATGGAAAGCGAGAAAGATGAAGATTATGAAGATGAAGAGGAACAAGAACTCTTAGAGCCTCACTCGTTTTCAAATGTTCCAAATATGCCTGAAGTTTCCATTACCGTGATGCGTCCGTCTGGAGAAACACTTCACGCTCGCCAGGGTATACAACAACTGGCCTCCAAGGACTGCCTAGTTTGTGGTAGATCTTACAGATATTCCCATAACGCAAGAAGACATGAACTCACAGCTCACGGCTTCGATAGATACACAAATAAGATTACAAATTTAAGATCTCGTGCCCACATGCAACCTAAGTTTAGACCTAACCCGTTCAACCCGAAAGCACGCCTTATGCCAAATCCGATCAGCCACAAAATGCAATACCATCACACCAAGTCAATGCCAAACAAAATGATACCACACAAAGTTATAGCGCAACCAAAACCCATACCGATTAGATCCTCAAAAACTCCCCAGAATAATTTACCATACCCTCTTCGGATCAAAGCTTTAAAAGACTTGCAAATAAAGAAAAAGGAACCTCAAATTTTGAAAACTCTTCTAACGTCTAAACCAGAAGTTTTGGTTTCCGAACCTGAGATAATAAATTCGGGCCCTGAAAGTCCGGAAACGTTGATATCTGAACCAGAAATAGCATCTTTCCAAGTGGAGACTATTCTGTCGGAGCCAGATACTTTTGTCAATACTAATCAGGAAGATGATGACGACGAAAATAATCATGGGCCAAACTATGATACTGTAGATATGGATTCTGAGAATGAAATAGAAATAGCCCGTCAGCAAGAGAATGATGGAGAAGTTGAGGAGAATCCCGCAGAAGTTGATGGAGAAGATAATACTCAAGATGAAAACAATATAGAAGAAAATCATGACGATAATGAAAAACATAATCATGAAGACAATGGGGAGAGTCGAGATGTCGATATGGATAACAATATAGATAACAATATAGATGGAGACGCTGATGATGACAACGCCAAAGAAAATGATTATGAGAATGAAAAAGACAATGAAATTATGAATCATGAAGAAAATGAAGAAGATGATGACTTACCTCCTATGAGTATTGCCCCTGTCGTCGAGATAAACGAGGATTTGCAGACTAACTCGTATAATAGTGACGGTAACGAGGAAGAATTAGACGAAACTGTTGATCCCAATGATACAGTCGATGGTGACGGTGAAGGAGAAGGTGAAGGTGAAGGAGAAGGCGATGGTGATGAAGTAAAAGATCTTGATCCTAACAAAGTATACGTCACTAAAACACAACGAGATTTTATACTCAAGTATCGTGACATCATCGAACAAATAAACACGAAGCGTTGTTTGTGCTGTCACAAAGAACATCCGCGTAGAAAGGCCGTCATTCAACACTTGCAAAAGAACGGCCATAAAGTTCCTAAACACACGTGCTATAATTGCGTAGTCACGTTTGGACACATTGGAGCCTTGCTCAGCCACATGAGATCTAACACGTGCACAGATCTGTGGAAAATTATTTATAACGAAAATGGAATTACAGATGATATAGTATTGGAAGATGAACCCAAAGATTCCAAAGTTCAATATAAAGATATACTTAACGCTAGATCATATGCATGCAAATTGTGCCCAGCCAAGTTTCAACTAAAGCAATTCATTATGAAACATGTCCTTGACGTGCACGAGGATGGCCAATCTCGAGTTCCCCACTCGTGTGTGCACTGTGGGTTACGCTTCAAAGATAAAAACTTCGGGAAAAGGCATATTCGTAATGGAGATTGTACCGTGTACATCTCTTGCGATTTATGTTCTGAAAAGTTTTTGAACTTACAAGATTTTAACGATCATGCAATAGCAGTACATGCGGGTAGCTTCGATCCCGACAACCAGAATAAGTGTGTCGACGGCCGACCCACAGATTGTCCCATATGTGGAAAGAAGAACACTAGTTACCCGAATTTGGTGAAACATTTGAAATGTATTCACAATGAGGAAAAGCCTCACCACTGCCAACATTGCGAAGCCAAATTCGAGCAAACTGCTGATCTTAACAAGCACATTTATATGGAACATTCTGATAGGACGCTAGGTATGCAGTCTTCTGAGCCCGATATGTCGCTTGTTAAAGAAGAAGCTGAAGAGTACCATTACTCGTGTACGGAATGCAATTCAATTTTCGAGACTGTCGATGCGTGGACGGACCATCAGGTCGCTGAACATAATCAAGTGGCCCACCATTGTGATCAGTGCGAAAAGAAATTCTTACGCCCATCAGAACTTGCAGAGCATAAAAATACACATCTAAGAGTTAAATTCTATCCGTGTAGTATATGTTCGAACTCATACAGCACGCCGCAAAAATTATCGGAACACGTTCAACAGGTTCATCCTGGTGCAGGGAAAACGCCTGGTGATACAGAATTTTTCTGTGAAATTTGTGTAAGGTCATTTAAGAGTCGACAAGCTTATTCTAACCATATGCGTATTCATGCAAAAGTGCCTACAACTAATAGGAAGCCTGGCGAAACCAAAGGATTTGCGCCTCAAATTATAGGGAAACCTATACGCCAGTTTTCCATGCAACCCGGATTTAGTCCATACGTTCCAAACGCACCATATTGTTGTGATATTTGCGGTAAAGGATTTATGCACAAGAAAAATATATGGAAGCACAAAAAGGTCCTACACGCTGACCTTCTTGCTGACAGAAATGACAGTGAAGAGAACACAATGCAGGCATCTACTGAAGAAGACGATTATAATGTTGATGAAAACGGCGCTATCTTGTCAACTCCGCAATTCAACAGTTTTAATTTCACTAATTTATCGAGTAACATGCAACAAAGTTCCCAAGATGCTTTACCATACTCTTGCGAATTGTGTTACAAAAGATTCCCGTTAAGGACAAGCCTGTGGAAACACAAACGTGCCAAACATGGAATCATTAACGCGAGTGCTGGCAGTAGCTCTGAAACTCAAACGCAACCGCAAGGCGAAGGTTCGAGATCCAGTTGCACCATATGTAAAATATCATTCACAGACAAAAAATCATATTACCGTCACAGAAAAAATGTTCACAAATCGTCTGTACAGATGTGTAAAATTTGTGGAAAACCACTGAACTCGACGTTAGAGCTTTACGAGCACCTTAAAGCAGCGCATGCTCGGGAACTACTAGGCTATGATGCAAACCAAGGATCAAGTAAATCTCAAGATGTAAGCCAAGATATGGACGCAGAATATGACGGCGACCAGGACTCTGTAGATCCGAGTATCGACTACCAGGCGCGATACCCTTGCGATGCTTGTGGAAAGCAATTTGTAGGACTACTAGCCTTGCAAAACCATCAATGTGTTAACCAAATTCAAAGCCAACCTCAAACTTTCGATTGCGAAATATGCCATAAGAGCTACACATCTATTGCTGCTCTCAAGAGCCACCGTGGGTGGCATTTACGCTCGCCCGATGGCAAGGCCGCAGCGAACAACACTGGGCTATGGATGCCTCAGAATAAAGTTACGAGCAAAGTGAGTAAACACGAAGTAGTCGACATTGTTCCAAATACCCGTGCATCGTCTACTCCAGCTGCCTTGGCTAAAAGACGACTACCACCCGAAGTAGAAGTGACCGTAGTGAATCCTAACAAGAAACTACGGTCAGACGATTCTATAGAAATGGACCATCAAAATAATTTATCTGGCGGTGCCGAAGACCGGTACTGCAATCTCTGCGATAAAGAATTCACTAAGCGGGCGGCGTATCAGCGTCACATGGACGAGGTTCATCAACCGAATTCTGTGTTCTGCCCTGTTTGCGATAAGTCGTTTACTCGAAAATCCACCTTGATTGTGCATATGAAGAAACATTACGAGGGCGGAGAAGGAAGTTCTGGGACCCAAATTGATGATGATGCGCACGCTTGTGAAGTTTGCGGCGCGCAGTTTGATAGTCTGAAAGCTTTGAATTCCCACCGAGCGATGGAGCATGGCGAAGATTCCGGGGAATCGGAAGACGATGGCGGTACAATAGCACCTCCAGGGGAGTTCACTTGTGCACAATGTGGAGATGGCGTAGCAACCCCACGCGATCTTATAGCTCATCGAACCATGCACGCGACCCCTACTAAATTCTTTTGCAACATATGCAAGGTTTACTTCGCGAGAGCACTCGATCTATCCTCCCACACTCGAGCGAGGCACTCGGATAACGAAAAAGTTTATTTCCCCTGCGCCATGTGCGACCGGTTTTATATGAATAAGAAGAGTTTACAAAGACACATCGAAATGTCCCACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRCELLPIFPTTSSDDSEPPVLASKIKDCVSVQISENDDLPTNVCRKCMDNVNNWHIFKTICERTQNKLQSLINKESNLLEEVKIKNEPLSDEAYDDGVVIDGSYPDIENNGPSHKVQPEGPPILASLGLTPRSDKGMESEKDEDYEDEEEQELLEPHSFSNVPNMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHGFDRYTNKITNLRSRAHMQPKFRPNPFNPKARLMPNPISHKMQYHHTKSMPNKMIPHKVIAQPKPIPIRSSKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPDTFVNTNQEDDDDENNHGPNYDTVDMDSENEIEIARQQENDGEVEENPAEVDGEDNTQDENNIEENHDDNEKHNHEDNGESRDVDMDNNIDNNIDGDADDDNAKENDYENEKDNEIMNHEENEEDDDLPPMSIAPVVEINEDLQTNSYNSDGNEEELDETVDPNDTVDGDGEGEGEGEGEGDGDEVKDLDPNKVYVTKTQRDFILKYRDIIEQINTKRCLCCHKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDEPKDSKVQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPHSCVHCGLRFKDKNFGKRHIRNGDCTVYISCDLCSEKFLNLQDFNDHAIAVHAGSFDPDNQNKCVDGRPTDCPICGKKNTSYPNLVKHLKCIHNEEKPHHCQHCEAKFEQTADLNKHIYMEHSDRTLGMQSSEPDMSLVKEEAEEYHYSCTECNSIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQQVHPGAGKTPGDTEFFCEICVRSFKSRQAYSNHMRIHAKVPTTNRKPGETKGFAPQIIGKPIRQFSMQPGFSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLADRNDSEENTMQASTEEDDYNVDENGAILSTPQFNSFNFTNLSSNMQQSSQDALPYSCELCYKRFPLRTSLWKHKRAKHGIINASAGSSSETQTQPQGEGSRSSCTICKISFTDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYDANQGSSKSQDVSQDMDAEYDGDQDSVDPSIDYQARYPCDACGKQFVGLLALQNHQCVNQIQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTSKVSKHEVVDIVPNTRASSTPAALAKRRLPPEVEVTVVNPNKKLRSDDSIEMDHQNNLSGGAEDRYCNLCDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSGTQIDDDAHACEVCGAQFDSLKALNSHRAMEHGEDSGESEDDGGTIAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVYFPCAMCDRFYMNKKSLQRHIEMSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00897124;
- 90% Identity
- iTF_00160046;
- 80% Identity
- -