Bodo010411.1
Basic Information
- Insect
- Bradysia odoriphaga
- Gene Symbol
- dmd-4
- Assembly
- GCA_016920775.1
- Location
- JAFDOW010000107.1:2990133-3011308[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-24 8.4e-21 73.4 12.6 1 47 33 79 33 79 0.98 2 2 3.6 1.4e+04 -4.2 1.5 32 35 249 252 245 256 0.46
Sequence Information
- Coding Sequence
- ATGGTTCCGTCAAACAGTTTAGTCAAAGGACTGGACAAATTATGTCGAGTGTCGAGTGGTAAAAGTGGAAGTTCGGTGAAGAATAGCGCTAGTGCTCGCGTTCCAAAGTGTGCCAGGTGCCGGAATCATGGTGTTATTTCGGGACTTAGAGGTCATAAGAAGCACTGCATGTATCGAAGTTGTCGGTGCCCGAAGTGTGAATTAATTCATGAACGACAGAGAATCATGGCTGCACAGGTTGCTCTTAAGCGACAACAAGCAGTTGAAGATGCAATTGCCCTACGACTTGCATCGAACGAAACTGGATCATCGTTGGAAGTGCTGCCGCCAGGAAAGATATTTGGAATGAACGTTACCGAACCATGTGTTTCGCCACACAAAGCCCAACCAGAGCCCGAGAAAAAACCGAGTAAGATTTCAACACCTCAGCCGGTTGTCTCTGAAAGTGCTATCGACATGTTAGCGCAACTGTTTCCGCATAGGAAACGGTCCGTTTTGGAACTGGTATTAAGACGTTGTGATTTAGATTTGCTGCGTGCTATCGAACAATGTGGACCTACACCTAGTGCATTTCGCCCGCCCACCTCAAAGAGTCAACCGATAACCATACATAGTCCGCCGAGTCAGGCGTTACAATCTCAATCACATTTCGGTCCAGTGTTTGCTTATCCAAAGTGGTTGCTGCCGATGTCCATTCCCGTTACAATGGGACATTTACCGAATTTAGCACCAAGATGTACACAGGAAAACTGTCCGATGTGCATTCATTCGATGGCGGTTTAA
- Protein Sequence
- MVPSNSLVKGLDKLCRVSSGKSGSSVKNSASARVPKCARCRNHGVISGLRGHKKHCMYRSCRCPKCELIHERQRIMAAQVALKRQQAVEDAIALRLASNETGSSLEVLPPGKIFGMNVTEPCVSPHKAQPEPEKKPSKISTPQPVVSESAIDMLAQLFPHRKRSVLELVLRRCDLDLLRAIEQCGPTPSAFRPPTSKSQPITIHSPPSQALQSQSHFGPVFAYPKWLLPMSIPVTMGHLPNLAPRCTQENCPMCIHSMAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00245428;
- 90% Identity
- iTF_00245428;
- 80% Identity
- -