Bcop007546.1
Basic Information
- Insect
- Bradysia coprophila
- Gene Symbol
- dmd-4
- Assembly
- GCA_014529535.1
- Location
- NW:125770-134470[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-24 8.3e-21 73.5 12.6 1 47 33 79 33 79 0.98 2 2 3.6 1.4e+04 -4.1 1.5 32 35 246 249 242 253 0.46
Sequence Information
- Coding Sequence
- ATGGTTCCGTCAAACAGTTTAGTCAAAGGACTGGACAAATTATGTCGAGTGTCGAGTGGTAAAAGTGGAAGTTCGGTGAAGAGTAGCGCTTGTGCTCGCGTTCCAAAGTGTGCCAGGTGCCGTAATCATGGTGTTATTTCGGGACTTAGGGGTCATAAGAAGCACTGCATGTATCGAAGTTGTCGGTGCCCGAAGTGTGAATTAATTCATGAACGACAGAGGATCATGGCTGCACAGGTTGCTCTTAAGCGACAACAGGCTGTTGAAGATGCAATTGCCCTACGACTTGCATCGAACGAAACTGGATCATCGTTGGAAGTGCTGCCGCcaggaaaaatatttggaatgaACGTTACCGAACCATGTGTTTCGCCACACAAAGCCCAATCAGAGCCCGAGAAAAAACCGACAACACCTCAGCCGGTCGTCTCTGAAAGTGCTATCGACATGCTAGCGCAACTGTTTCCACATAGGAAACGATCCGTTTTGGAACTGGTGTTAAGACGGTGTGATTTGGATTTGCTGCGTGCTATCGAACAATGTGGTCCTACACCCAGTGCATTTCGGCCGCCCACCTCAAAGAGTCAACCGATAACCATACATAGTCCGTCGAATCAGGCGTTACAATCTCAATCACATTTCGGTCCAGTGTTTGCTTATCCAAAATGGTTGCTGCCGATGTCCATTCCCGTTACAATGGGACATTTACCTAATTTAGCGCCAAGGTGTACACAGGAAAACTGTCCGATGTGCATTCATTCGATGGCGGTTTAA
- Protein Sequence
- MVPSNSLVKGLDKLCRVSSGKSGSSVKSSACARVPKCARCRNHGVISGLRGHKKHCMYRSCRCPKCELIHERQRIMAAQVALKRQQAVEDAIALRLASNETGSSLEVLPPGKIFGMNVTEPCVSPHKAQSEPEKKPTTPQPVVSESAIDMLAQLFPHRKRSVLELVLRRCDLDLLRAIEQCGPTPSAFRPPTSKSQPITIHSPSNQALQSQSHFGPVFAYPKWLLPMSIPVTMGHLPNLAPRCTQENCPMCIHSMAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00246349;
- 90% Identity
- iTF_00246349;
- 80% Identity
- -