Bneb018570.1
Basic Information
- Insect
- Brachynemurus nebulosus
- Gene Symbol
- ATAD2
- Assembly
- GCA_035578155.1
- Location
- JAPWDM010000005.1:29325907-29348995[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 2.3 5.9e+03 -1.1 0.0 26 44 1483 1501 1480 1505 0.90 2 7 0.068 1.7e+02 3.8 0.0 22 49 1579 1606 1574 1609 0.87 3 7 4.1 1.1e+04 -1.9 0.0 21 40 1654 1673 1644 1678 0.77 4 7 0.0019 4.9 8.8 0.1 21 52 1815 1846 1807 1850 0.83 5 7 0.51 1.3e+03 1.0 0.0 20 47 1885 1912 1878 1919 0.80 6 7 0.026 68 5.1 0.0 21 46 1970 1995 1967 2002 0.87 7 7 0.0061 16 7.1 0.2 21 46 1998 2023 1994 2025 0.90
Sequence Information
- Coding Sequence
- ATGGTGAATACAAGACGTTCAGAAACGGTATCGGAAGGACGTCGCCACTCACATTATCGTACGCCAGGGACGAAAGAATCAAGCGTGGAGGAGAGTAGTGCTGATCGTGGAAGTAGCGACGTGGATGAGCAACCGTCGCACGAGGAAGAGAGTGAACCGTGGAGTCCAAAATGGGCCAGTAGATCCACCACATGTTTAAACAATCGTGTTCGGGAGCTACGAAATCGATTCGTTTGCACGTCGGAGCAACGTGATTATTCGCGAAGCGTTCGAAGAAATCACCTTAGATCGTCACTTCGTAGTAGTAAACGTTTAGATATGGACAATCGACCGAATCGTCGCGGCGTGTTTTCTCGACGAAATGTCATTGAAGACGAATCGGAGGACTTAATGGATGACCTTGACCACGATGCGACTGACTATAATCTGTTTACGCCACACCATTCGGATCGaCCCAAAAGACGAATTATAAAAGTGAGATCGGAAGAAATTAATTACTCCGGTGATAGCCATCCAATTCGACGAGGTAGGCGAAGACGGATACCGTCAGAGAAACTGGTCAACGAACGAATAAGAAGTCGGGCAGGTTTACGTCCTTTGAAACGCGAATGTTACGCCGATCCAAACTCACCATTTTCgcaagaattgaatagttccgATGAAAAACCGGACGTTGAAATTCGGCGAAGTAAACGACAACGAAAATTCAAATATAGCACATTCAACACGAGTTGGATCACGGAACATCAGATGATTCGGGGATATCCGAAGTTTAAGAAAGAATTTAGTTCGGATCACGAAGAAGATTCAAAGGAAAGTCGAATACCGGAAGAGGAAAATAATGATCGAAAGGCGAACGAGATACTGAAAGAGTCCATCAGTGATATTAGGAGAACAAGgacTAGTAATTCTAATGTAAACAAgaaatatgtttataaatttttaagcagAAATTCATCGACACAAGAAATTCGTCAAAGATCTCAAGTAAATGGTTCTATGGAATCTTCTTTACCATCAACAGAAAATAGTTCGAAAgACAAACCAGATGATAATGATAGGGTAATGAACGGTGAAGCCACAACGGAAGAACTAACGGGGGCTGCAAATCAAAATGAGCCACAGAATGACGCCGAAAAaccaaaatcgaataaaatgaatgatgaagaTTCTCGCCCGCCGCTAATTCGCAGCAGTAGACTTCGTCAACGAGCTGTTATTAGCGTCCAACAAAATGACAGTGATAGCACAACTGAAGAACGACACGCTAGTCCAAAATATAAACTACGACAACGAAAACCTAAACCGCTTAAACtggaacAAGAAGAAACTAGAGTGTGTCGGGAACGACGAGAACTTCCCCGGCGACGCTTGAGACGTAGAGCCAGAAATAAAGTCACCGACACATCCTCATCAGATAGTACGTCATCAGATGACGACGATTTACTGCGAAAGAAGCATACGGCCGGTAACACATCAATGCAACGGAAACCACCGAACAGACGAGCAAGTCCACCACGCGATAAAGGAAAATTCAAACTGAAAGACTTCACGTTAGACCCAACGTCCATAGATAGTTCAATCACGTTCAAGTCTATCGGTGGATTGGACGAGCAGGTTCGATGTCTTCGCGAAATGGTCGTTTTGCCAATACTCTATCCGGAAATCTTTCGAATGTATCAAACAAATCCACCGAAAGGTGTCCTGTTTCATGGTCCACCCGGGACGGGAAAAACTCTTATGGCGAGAGCATTGGCGAACGAATGTAGCGTGGGTAATCGGAAAGTGACGTTTTTCATGCGGAAAGGTGCAGATTTGCTCAGTAAATGGATCGGGCAAACGGAAAAACAGATGACGCTACTTTTTGAACAAgCGGCACAAATGGCTCCCTCGATAATATTCTTTGATGAAATTGATGGTTTGGCTCCAGCGCGAACTGCACGGCAAGAACAGGTTCATGTGAGTGTTGTCGCTTCTTTGTTGGCTTTAATGGACGGTTTGGACAAGAGTCGCGGGGAAGTTATTGTCATTGGTGCAACTAATCGTTTGGACGCGTTGGATCCTGCACTTAGGCGACCTGGTCGATTCGATCGCGAAATCTATTTTCCACTACCATCGTATAATCAACGAAAAgaaattcttaatattattttatctgaatggCCCACAAAACCATCCGAAGGGTTAATAACGTCGTTAGCTGAACGAAGTGTTGGATACTGTGGTGCCGATCTGAGAGCTTTATGTACTGAAGCAGTATTACGTTGTGTTCGTCGTACTTATCCGCAAATTTATGAGTCTTCCTATCGTTTGTTAATCGATCCCTCGAAAATTAAAGTTGAACCATGTGATTTTGATAACGCTGCCTCATCATTAGTCCCGGCTGGGGCTCGCAGTGCCCCACTTCATCTATCATCAACGCCTCCCATGTATTTAGAACCATTACTCGCGAAACCGTTAAAGGCTGCTATCGATTTGATCACGCAAAGTTTTCCACCAGCGATCAAAAACATATCTTCGAATAGCGCAAAAGAATCCAGCAGTGCTCGATTGTTGATTTCCGGTGGAGGATCTCATCTGGTAGCAAATGCATTGTTAAAAGAGTTTGAACATTTGTCAGTGCTTACGTTAGATGTTGTAACGCTACATAATGGACTCGCTGGCGGTCCTGAAGAGGCTTGTATTCAAGTATTAAATGAGGCCAGAAGGAATGCCCCAAGTATATTGTACTTACCTAGGTTGAATATGTGGTGGGATATGGCGAATGACACTGTGAAGGTATTGTTGCAGATGATGTACAGCACGTTTTTAACCAACGTTTCCTCGCAGATTACGTCAATTCTACTATTAGCCACGATAGATGTCTACACCGCCGATTTTAATAACCagattttagaattatttagtGGATATCGAAATGAAGTTTTGGAAGTGGATATACCCACAGAGGAAGAACGGGAAGCCTTCTTCAGGCCTTTAATAATAGACGTAGCTACAAAGACCCCACCACCGTTGGTAATTCAAACACAAACAGTGTACGAACCGTTACCAAGAGCACCAACACCTCCACCACCCCCTCTGAGTCCTAGGTCCAAACAGCTGCTTCTGGACAAAGAAGAGGAAACGTTGATCGAACTAAGGATATTTTTACGAGATGTCTGCAAAAAATTGGCGAGCAATAAAGCGTTTTTTATGTTCACGAAACCAGTCGACCTAGAGGAAGTTCCCGATTACCTGAACGTCGTCGAAAAACCAATGGATTTGGAGACGATGATGACAAAAGTTGATCTGCATTGCTACTCCAGTGCTCAAGAATTCTTGATGGATATCGATTTGATCCAACTAAACGCACTTACCTACAATCCGGATGTAACACCAGCCGATAAGCAAATTCGTCATCGAGCCTGTTGGTTTAGAGATTACGCATACGCACTGATTAAGGCTGAAATGGACACCGACTTCGAAGAGAATTGTCGAAAAATTGCGAAGAATCGGAAGGCAAGACAAACTGGTGACCCGTACGAATTTCTACCAAATCATATTCGTGCTCTGGCTGAAGAAGCTTCTACCTCCAATAATAACACTGCCACCGCCGAGGCGATCGATTCGAAGAACACCGAGCCAAATAATCCTGAAGAAAATGTCATTAATCACAAAACAGCGGAAGAAAATGCGGAATCCACCGCGAAAATACCCGTACGAACTAGTCCAAATAGAAAACGTCGAGTACCATCTTGGGCGAAAGGATTCTTAACCGGGAACAGAAAGAAACGGAAAATTGGAACGCGTACCTCCGAAGAGATTAAAGACacagaagaaaaaattgaacttaaAGAAGAAGTTGCTCAAACTAGTGATACAGAATTAAAAGATACTTCCATGGACGGATTGGAAAAAGAAAAGACTGAACCAGACCCTCCACCATCACCGCCAAAACTAACGCCAGAACGACGTCAATCCGAACGACGCCAATCGGTTAGCATCAATAAGTACGATTTAAATGAAGTATTAGCGAAAACCGTTAGCGTCACCGATGGTTGCTCCATCGATATTCTATGTGATCTGTATatgcaattaaaattacatattaaaaaatacacccAAAGCTATAATCGACAATCTTTACCTCaaattcgcCCAGATGATAATCTGCCGAAATTAGCATGTTTAGAATGTATAGATAAATTACAAGTTTCATATTTATTTCGCCAAACATGTTTACAGTCtgatacaaaattaaaattactttataatgtaaataataattcaaaatcgATAAAAAATGAAGACACTGTAGAAGATAATAAACCGGATCATGATCTTACAGACGGTATTGatgatgttttaattaaatacgaAGATCATTCAGATTCGGACCATCATGGGGACAAAGAAAATGAGAGTCCAGATGAGGACGACGAAGAGGGCGACGAAGTTACGAAACATCAATGTAGTCTTTGCGATGCCACGTTTGAAAGtgaagcaaatttaaaaaagcaTATCGTCGAGCATGAGAACaaaatttcgagaaaatcgAAACAGAAATCGTCGAAAATTGACATCAGTTTTCTGGAGGATCAGTGTAAAATTTGTAATGCTCCATACTGTTCAAAAGATTTCCATTTAATCAAATCCCGAGCCCACAATGAAGGCAAACCGTTCATTTGTAAATTGTGTGGGAAAGGGTTTAAACAGAAAGCTCATTTATCAGTCCATTGGAAAACTCATACTGGCGAAAAATCTCATACATGCAATATTTGCATGAAAAGTTTCATTACCAAAAGCAACCTGAAAACtcacaaaataaacaaacattttaaaacCAGCGAAAATAAAGATATCTCAAAAGAACTGGAAGCCGCGCGGAAATCCAAAACAACCGATAATTATCTTTGTGTCGAATGTGATGAAAAATTCAAATCCTACATCGGCTACAAGAAACACATGGAAATCCATTCAGGAGAACGGCCCTTCGTTTGTCCCGAATGTGGTATGGGATTCAAACAGAAAATTCATCTGTCAATCCACACCAAATCGCACACCGGCGAAAAACAATACGGTTGCGATTTGTGCCCAAAACAATTCACCACCAGAAGCGTTTTGAAAGCCCACATCCTGCGGGTGCATTCCGAAGATGATCTCGAAAGCAATGTACATTTCCAGAACGACTTCAACGACGAAGACAGCGCAGACGACATCAAAAATGACATTAAACGAGAAGAAGACGGAATTTCGGATCAAGAAAAATCTCTGCAAGGAGACGACGAACCAAAAGTAAAAGGACTCTACGCGTGCAGCCAATGCGACAAGTCATTCTTGGCTAACGCTGCCCTCCAAGACCACCTAAGAATTCACACCGGCGAGCGACCATTCGTCTGCGATTTCTGTGGTAAAGGCTTCAAACAGAAAGCTCATCTCACAATCCACAAAAAATCGCACACCGGTGAAAAATCGTACACTTGCGACATCTGCTCAAAAAGTTACATCACAAACAGTGCGCTACGAAAACACATGCAAGTCCGTCACGCGACACTCCCAAAACCGCTTGTTCCGAAACCGCGAAAACGACAAACACAAAAAATCTACAACTGTAAATACTGTCCAAAAACATTCTTCCTCAAACACATGTATATAAAACATTCCCGTACACATACCGGGGAATCCCCGTACATGTGCGAAATGTGCGGAAAAACATTTAAACAGAACTCACACTTAAAAAGTCATAAACGCATGCATACGGGGGAAAAACCGTACCCGTGCAACCTCTGTCCAAAAGCATTTGCCACCGGCACTGAACTTCGCGTGcataaaattatacattcaGATGAATTCCCGCATAAATGTAGTATGTGCGATAAGCGATTTAAATGGCGTATCACCGCTTGGCGACATATGATGTATCATACCGGCGAGAAACCAAATAAATGTACGATTTGTAGTAAGGCGTTTATTGAGGGCGGAGCACTGCGGCGACATATGCGCGTGCACACTGGCGAACGGCCccaaaaatgtaatatttgttaTCGAACATTTAAAGAGACGTCACATTTAAAAACGCATATGAACATTCATAATACATAA
- Protein Sequence
- MVNTRRSETVSEGRRHSHYRTPGTKESSVEESSADRGSSDVDEQPSHEEESEPWSPKWASRSTTCLNNRVRELRNRFVCTSEQRDYSRSVRRNHLRSSLRSSKRLDMDNRPNRRGVFSRRNVIEDESEDLMDDLDHDATDYNLFTPHHSDRPKRRIIKVRSEEINYSGDSHPIRRGRRRRIPSEKLVNERIRSRAGLRPLKRECYADPNSPFSQELNSSDEKPDVEIRRSKRQRKFKYSTFNTSWITEHQMIRGYPKFKKEFSSDHEEDSKESRIPEEENNDRKANEILKESISDIRRTRTSNSNVNKKYVYKFLSRNSSTQEIRQRSQVNGSMESSLPSTENSSKDKPDDNDRVMNGEATTEELTGAANQNEPQNDAEKPKSNKMNDEDSRPPLIRSSRLRQRAVISVQQNDSDSTTEERHASPKYKLRQRKPKPLKLEQEETRVCRERRELPRRRLRRRARNKVTDTSSSDSTSSDDDDLLRKKHTAGNTSMQRKPPNRRASPPRDKGKFKLKDFTLDPTSIDSSITFKSIGGLDEQVRCLREMVVLPILYPEIFRMYQTNPPKGVLFHGPPGTGKTLMARALANECSVGNRKVTFFMRKGADLLSKWIGQTEKQMTLLFEQAAQMAPSIIFFDEIDGLAPARTARQEQVHVSVVASLLALMDGLDKSRGEVIVIGATNRLDALDPALRRPGRFDREIYFPLPSYNQRKEILNIILSEWPTKPSEGLITSLAERSVGYCGADLRALCTEAVLRCVRRTYPQIYESSYRLLIDPSKIKVEPCDFDNAASSLVPAGARSAPLHLSSTPPMYLEPLLAKPLKAAIDLITQSFPPAIKNISSNSAKESSSARLLISGGGSHLVANALLKEFEHLSVLTLDVVTLHNGLAGGPEEACIQVLNEARRNAPSILYLPRLNMWWDMANDTVKVLLQMMYSTFLTNVSSQITSILLLATIDVYTADFNNQILELFSGYRNEVLEVDIPTEEEREAFFRPLIIDVATKTPPPLVIQTQTVYEPLPRAPTPPPPPLSPRSKQLLLDKEEETLIELRIFLRDVCKKLASNKAFFMFTKPVDLEEVPDYLNVVEKPMDLETMMTKVDLHCYSSAQEFLMDIDLIQLNALTYNPDVTPADKQIRHRACWFRDYAYALIKAEMDTDFEENCRKIAKNRKARQTGDPYEFLPNHIRALAEEASTSNNNTATAEAIDSKNTEPNNPEENVINHKTAEENAESTAKIPVRTSPNRKRRVPSWAKGFLTGNRKKRKIGTRTSEEIKDTEEKIELKEEVAQTSDTELKDTSMDGLEKEKTEPDPPPSPPKLTPERRQSERRQSVSINKYDLNEVLAKTVSVTDGCSIDILCDLYMQLKLHIKKYTQSYNRQSLPQIRPDDNLPKLACLECIDKLQVSYLFRQTCLQSDTKLKLLYNVNNNSKSIKNEDTVEDNKPDHDLTDGIDDVLIKYEDHSDSDHHGDKENESPDEDDEEGDEVTKHQCSLCDATFESEANLKKHIVEHENKISRKSKQKSSKIDISFLEDQCKICNAPYCSKDFHLIKSRAHNEGKPFICKLCGKGFKQKAHLSVHWKTHTGEKSHTCNICMKSFITKSNLKTHKINKHFKTSENKDISKELEAARKSKTTDNYLCVECDEKFKSYIGYKKHMEIHSGERPFVCPECGMGFKQKIHLSIHTKSHTGEKQYGCDLCPKQFTTRSVLKAHILRVHSEDDLESNVHFQNDFNDEDSADDIKNDIKREEDGISDQEKSLQGDDEPKVKGLYACSQCDKSFLANAALQDHLRIHTGERPFVCDFCGKGFKQKAHLTIHKKSHTGEKSYTCDICSKSYITNSALRKHMQVRHATLPKPLVPKPRKRQTQKIYNCKYCPKTFFLKHMYIKHSRTHTGESPYMCEMCGKTFKQNSHLKSHKRMHTGEKPYPCNLCPKAFATGTELRVHKIIHSDEFPHKCSMCDKRFKWRITAWRHMMYHTGEKPNKCTICSKAFIEGGALRRHMRVHTGERPQKCNICYRTFKETSHLKTHMNIHNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00239535;
- 90% Identity
- iTF_00239535;
- 80% Identity
- iTF_00239535;