Basic Information

Insect: Brachynemurus nebulosus
Gene Symbol: ATAD2
Assembly: GCA_035578155.1
Location: JAPWDM010000005.1:29325907-29348995[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00047 0.026 16.4 0.4 1 23 1482 1504 1482 1504 0.95

2 15 1.3e-05 0.0007 21.3 1.8 1 23 1554 1576 1554 1576 0.98

3 15 0.0017 0.091 14.6 3.7 1 23 1582 1605 1582 1605 0.93

4 15 0.0051 0.28 13.1 0.4 1 23 1630 1652 1630 1652 0.95

5 15 4.8e-05 0.0026 19.5 0.9 1 23 1658 1680 1658 1680 0.98

6 15 0.00063 0.034 16.0 0.2 3 23 1688 1709 1686 1709 0.96

7 15 0.0087 0.48 12.4 0.1 1 23 1763 1785 1763 1785 0.97

8 15 2.7e-05 0.0015 20.3 2.7 1 23 1791 1813 1791 1813 0.98

9 15 2.5e-06 0.00013 23.5 0.7 1 23 1819 1842 1819 1842 0.98

10 15 0.014 0.77 11.7 5.9 1 23 1862 1884 1862 1884 0.98

11 15 1.3e-06 7.2e-05 24.4 4.6 1 23 1890 1912 1890 1912 0.98

12 15 0.0018 0.1 14.5 0.0 1 23 1918 1940 1918 1940 0.97

13 15 0.13 7.1 8.7 2.8 1 23 1946 1968 1946 1968 0.96

14 15 0.00026 0.014 17.2 0.2 2 23 1975 1996 1974 1996 0.98

15 15 0.00027 0.015 17.1 4.0 2 23 2003 2024 2002 2024 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00047	0.026	16.4	0.4	1	23	1482	1504	1482	1504	0.95
2	15	1.3e-05	0.0007	21.3	1.8	1	23	1554	1576	1554	1576	0.98
3	15	0.0017	0.091	14.6	3.7	1	23	1582	1605	1582	1605	0.93
4	15	0.0051	0.28	13.1	0.4	1	23	1630	1652	1630	1652	0.95
5	15	4.8e-05	0.0026	19.5	0.9	1	23	1658	1680	1658	1680	0.98
6	15	0.00063	0.034	16.0	0.2	3	23	1688	1709	1686	1709	0.96
7	15	0.0087	0.48	12.4	0.1	1	23	1763	1785	1763	1785	0.97
8	15	2.7e-05	0.0015	20.3	2.7	1	23	1791	1813	1791	1813	0.98
9	15	2.5e-06	0.00013	23.5	0.7	1	23	1819	1842	1819	1842	0.98
10	15	0.014	0.77	11.7	5.9	1	23	1862	1884	1862	1884	0.98
11	15	1.3e-06	7.2e-05	24.4	4.6	1	23	1890	1912	1890	1912	0.98
12	15	0.0018	0.1	14.5	0.0	1	23	1918	1940	1918	1940	0.97
13	15	0.13	7.1	8.7	2.8	1	23	1946	1968	1946	1968	0.96
14	15	0.00026	0.014	17.2	0.2	2	23	1975	1996	1974	1996	0.98
15	15	0.00027	0.015	17.1	4.0	2	23	2003	2024	2002	2024	0.98

Sequence Information

Coding Sequence: ATGGTGAATACAAGACGTTCAGAAACGGTATCGGAAGGACGTCGCCACTCACATTATCGTACGCCAGGGACGAAAGAATCAAGCGTGGAGGAGAGTAGTGCTGATCGTGGAAGTAGCGACGTGGATGAGCAACCGTCGCACGAGGAAGAGAGTGAACCGTGGAGTCCAAAATGGGCCAGTAGATCCACCACATGTTTAAACAATCGTGTTCGGGAGCTACGAAATCGATTCGTTTGCACGTCGGAGCAACGTGATTATTCGCGAAGCGTTCGAAGAAATCACCTTAGATCGTCACTTCGTAGTAGTAAACGTTTAGATATGGACAATCGACCGAATCGTCGCGGCGTGTTTTCTCGACGAAATGTCATTGAAGACGAATCGGAGGACTTAATGGATGACCTTGACCACGATGCGACTGACTATAATCTGTTTACGCCACACCATTCGGATCGaCCCAAAAGACGAATTATAAAAGTGAGATCGGAAGAAATTAATTACTCCGGTGATAGCCATCCAATTCGACGAGGTAGGCGAAGACGGATACCGTCAGAGAAACTGGTCAACGAACGAATAAGAAGTCGGGCAGGTTTACGTCCTTTGAAACGCGAATGTTACGCCGATCCAAACTCACCATTTTCgcaagaattgaatagttccgATGAAAAACCGGACGTTGAAATTCGGCGAAGTAAACGACAACGAAAATTCAAATATAGCACATTCAACACGAGTTGGATCACGGAACATCAGATGATTCGGGGATATCCGAAGTTTAAGAAAGAATTTAGTTCGGATCACGAAGAAGATTCAAAGGAAAGTCGAATACCGGAAGAGGAAAATAATGATCGAAAGGCGAACGAGATACTGAAAGAGTCCATCAGTGATATTAGGAGAACAAGgacTAGTAATTCTAATGTAAACAAgaaatatgtttataaatttttaagcagAAATTCATCGACACAAGAAATTCGTCAAAGATCTCAAGTAAATGGTTCTATGGAATCTTCTTTACCATCAACAGAAAATAGTTCGAAAgACAAACCAGATGATAATGATAGGGTAATGAACGGTGAAGCCACAACGGAAGAACTAACGGGGGCTGCAAATCAAAATGAGCCACAGAATGACGCCGAAAAaccaaaatcgaataaaatgaatgatgaagaTTCTCGCCCGCCGCTAATTCGCAGCAGTAGACTTCGTCAACGAGCTGTTATTAGCGTCCAACAAAATGACAGTGATAGCACAACTGAAGAACGACACGCTAGTCCAAAATATAAACTACGACAACGAAAACCTAAACCGCTTAAACtggaacAAGAAGAAACTAGAGTGTGTCGGGAACGACGAGAACTTCCCCGGCGACGCTTGAGACGTAGAGCCAGAAATAAAGTCACCGACACATCCTCATCAGATAGTACGTCATCAGATGACGACGATTTACTGCGAAAGAAGCATACGGCCGGTAACACATCAATGCAACGGAAACCACCGAACAGACGAGCAAGTCCACCACGCGATAAAGGAAAATTCAAACTGAAAGACTTCACGTTAGACCCAACGTCCATAGATAGTTCAATCACGTTCAAGTCTATCGGTGGATTGGACGAGCAGGTTCGATGTCTTCGCGAAATGGTCGTTTTGCCAATACTCTATCCGGAAATCTTTCGAATGTATCAAACAAATCCACCGAAAGGTGTCCTGTTTCATGGTCCACCCGGGACGGGAAAAACTCTTATGGCGAGAGCATTGGCGAACGAATGTAGCGTGGGTAATCGGAAAGTGACGTTTTTCATGCGGAAAGGTGCAGATTTGCTCAGTAAATGGATCGGGCAAACGGAAAAACAGATGACGCTACTTTTTGAACAAgCGGCACAAATGGCTCCCTCGATAATATTCTTTGATGAAATTGATGGTTTGGCTCCAGCGCGAACTGCACGGCAAGAACAGGTTCATGTGAGTGTTGTCGCTTCTTTGTTGGCTTTAATGGACGGTTTGGACAAGAGTCGCGGGGAAGTTATTGTCATTGGTGCAACTAATCGTTTGGACGCGTTGGATCCTGCACTTAGGCGACCTGGTCGATTCGATCGCGAAATCTATTTTCCACTACCATCGTATAATCAACGAAAAgaaattcttaatattattttatctgaatggCCCACAAAACCATCCGAAGGGTTAATAACGTCGTTAGCTGAACGAAGTGTTGGATACTGTGGTGCCGATCTGAGAGCTTTATGTACTGAAGCAGTATTACGTTGTGTTCGTCGTACTTATCCGCAAATTTATGAGTCTTCCTATCGTTTGTTAATCGATCCCTCGAAAATTAAAGTTGAACCATGTGATTTTGATAACGCTGCCTCATCATTAGTCCCGGCTGGGGCTCGCAGTGCCCCACTTCATCTATCATCAACGCCTCCCATGTATTTAGAACCATTACTCGCGAAACCGTTAAAGGCTGCTATCGATTTGATCACGCAAAGTTTTCCACCAGCGATCAAAAACATATCTTCGAATAGCGCAAAAGAATCCAGCAGTGCTCGATTGTTGATTTCCGGTGGAGGATCTCATCTGGTAGCAAATGCATTGTTAAAAGAGTTTGAACATTTGTCAGTGCTTACGTTAGATGTTGTAACGCTACATAATGGACTCGCTGGCGGTCCTGAAGAGGCTTGTATTCAAGTATTAAATGAGGCCAGAAGGAATGCCCCAAGTATATTGTACTTACCTAGGTTGAATATGTGGTGGGATATGGCGAATGACACTGTGAAGGTATTGTTGCAGATGATGTACAGCACGTTTTTAACCAACGTTTCCTCGCAGATTACGTCAATTCTACTATTAGCCACGATAGATGTCTACACCGCCGATTTTAATAACCagattttagaattatttagtGGATATCGAAATGAAGTTTTGGAAGTGGATATACCCACAGAGGAAGAACGGGAAGCCTTCTTCAGGCCTTTAATAATAGACGTAGCTACAAAGACCCCACCACCGTTGGTAATTCAAACACAAACAGTGTACGAACCGTTACCAAGAGCACCAACACCTCCACCACCCCCTCTGAGTCCTAGGTCCAAACAGCTGCTTCTGGACAAAGAAGAGGAAACGTTGATCGAACTAAGGATATTTTTACGAGATGTCTGCAAAAAATTGGCGAGCAATAAAGCGTTTTTTATGTTCACGAAACCAGTCGACCTAGAGGAAGTTCCCGATTACCTGAACGTCGTCGAAAAACCAATGGATTTGGAGACGATGATGACAAAAGTTGATCTGCATTGCTACTCCAGTGCTCAAGAATTCTTGATGGATATCGATTTGATCCAACTAAACGCACTTACCTACAATCCGGATGTAACACCAGCCGATAAGCAAATTCGTCATCGAGCCTGTTGGTTTAGAGATTACGCATACGCACTGATTAAGGCTGAAATGGACACCGACTTCGAAGAGAATTGTCGAAAAATTGCGAAGAATCGGAAGGCAAGACAAACTGGTGACCCGTACGAATTTCTACCAAATCATATTCGTGCTCTGGCTGAAGAAGCTTCTACCTCCAATAATAACACTGCCACCGCCGAGGCGATCGATTCGAAGAACACCGAGCCAAATAATCCTGAAGAAAATGTCATTAATCACAAAACAGCGGAAGAAAATGCGGAATCCACCGCGAAAATACCCGTACGAACTAGTCCAAATAGAAAACGTCGAGTACCATCTTGGGCGAAAGGATTCTTAACCGGGAACAGAAAGAAACGGAAAATTGGAACGCGTACCTCCGAAGAGATTAAAGACacagaagaaaaaattgaacttaaAGAAGAAGTTGCTCAAACTAGTGATACAGAATTAAAAGATACTTCCATGGACGGATTGGAAAAAGAAAAGACTGAACCAGACCCTCCACCATCACCGCCAAAACTAACGCCAGAACGACGTCAATCCGAACGACGCCAATCGGTTAGCATCAATAAGTACGATTTAAATGAAGTATTAGCGAAAACCGTTAGCGTCACCGATGGTTGCTCCATCGATATTCTATGTGATCTGTATatgcaattaaaattacatattaaaaaatacacccAAAGCTATAATCGACAATCTTTACCTCaaattcgcCCAGATGATAATCTGCCGAAATTAGCATGTTTAGAATGTATAGATAAATTACAAGTTTCATATTTATTTCGCCAAACATGTTTACAGTCtgatacaaaattaaaattactttataatgtaaataataattcaaaatcgATAAAAAATGAAGACACTGTAGAAGATAATAAACCGGATCATGATCTTACAGACGGTATTGatgatgttttaattaaatacgaAGATCATTCAGATTCGGACCATCATGGGGACAAAGAAAATGAGAGTCCAGATGAGGACGACGAAGAGGGCGACGAAGTTACGAAACATCAATGTAGTCTTTGCGATGCCACGTTTGAAAGtgaagcaaatttaaaaaagcaTATCGTCGAGCATGAGAACaaaatttcgagaaaatcgAAACAGAAATCGTCGAAAATTGACATCAGTTTTCTGGAGGATCAGTGTAAAATTTGTAATGCTCCATACTGTTCAAAAGATTTCCATTTAATCAAATCCCGAGCCCACAATGAAGGCAAACCGTTCATTTGTAAATTGTGTGGGAAAGGGTTTAAACAGAAAGCTCATTTATCAGTCCATTGGAAAACTCATACTGGCGAAAAATCTCATACATGCAATATTTGCATGAAAAGTTTCATTACCAAAAGCAACCTGAAAACtcacaaaataaacaaacattttaaaacCAGCGAAAATAAAGATATCTCAAAAGAACTGGAAGCCGCGCGGAAATCCAAAACAACCGATAATTATCTTTGTGTCGAATGTGATGAAAAATTCAAATCCTACATCGGCTACAAGAAACACATGGAAATCCATTCAGGAGAACGGCCCTTCGTTTGTCCCGAATGTGGTATGGGATTCAAACAGAAAATTCATCTGTCAATCCACACCAAATCGCACACCGGCGAAAAACAATACGGTTGCGATTTGTGCCCAAAACAATTCACCACCAGAAGCGTTTTGAAAGCCCACATCCTGCGGGTGCATTCCGAAGATGATCTCGAAAGCAATGTACATTTCCAGAACGACTTCAACGACGAAGACAGCGCAGACGACATCAAAAATGACATTAAACGAGAAGAAGACGGAATTTCGGATCAAGAAAAATCTCTGCAAGGAGACGACGAACCAAAAGTAAAAGGACTCTACGCGTGCAGCCAATGCGACAAGTCATTCTTGGCTAACGCTGCCCTCCAAGACCACCTAAGAATTCACACCGGCGAGCGACCATTCGTCTGCGATTTCTGTGGTAAAGGCTTCAAACAGAAAGCTCATCTCACAATCCACAAAAAATCGCACACCGGTGAAAAATCGTACACTTGCGACATCTGCTCAAAAAGTTACATCACAAACAGTGCGCTACGAAAACACATGCAAGTCCGTCACGCGACACTCCCAAAACCGCTTGTTCCGAAACCGCGAAAACGACAAACACAAAAAATCTACAACTGTAAATACTGTCCAAAAACATTCTTCCTCAAACACATGTATATAAAACATTCCCGTACACATACCGGGGAATCCCCGTACATGTGCGAAATGTGCGGAAAAACATTTAAACAGAACTCACACTTAAAAAGTCATAAACGCATGCATACGGGGGAAAAACCGTACCCGTGCAACCTCTGTCCAAAAGCATTTGCCACCGGCACTGAACTTCGCGTGcataaaattatacattcaGATGAATTCCCGCATAAATGTAGTATGTGCGATAAGCGATTTAAATGGCGTATCACCGCTTGGCGACATATGATGTATCATACCGGCGAGAAACCAAATAAATGTACGATTTGTAGTAAGGCGTTTATTGAGGGCGGAGCACTGCGGCGACATATGCGCGTGCACACTGGCGAACGGCCccaaaaatgtaatatttgttaTCGAACATTTAAAGAGACGTCACATTTAAAAACGCATATGAACATTCATAATACATAA
Protein Sequence: MVNTRRSETVSEGRRHSHYRTPGTKESSVEESSADRGSSDVDEQPSHEEESEPWSPKWASRSTTCLNNRVRELRNRFVCTSEQRDYSRSVRRNHLRSSLRSSKRLDMDNRPNRRGVFSRRNVIEDESEDLMDDLDHDATDYNLFTPHHSDRPKRRIIKVRSEEINYSGDSHPIRRGRRRRIPSEKLVNERIRSRAGLRPLKRECYADPNSPFSQELNSSDEKPDVEIRRSKRQRKFKYSTFNTSWITEHQMIRGYPKFKKEFSSDHEEDSKESRIPEEENNDRKANEILKESISDIRRTRTSNSNVNKKYVYKFLSRNSSTQEIRQRSQVNGSMESSLPSTENSSKDKPDDNDRVMNGEATTEELTGAANQNEPQNDAEKPKSNKMNDEDSRPPLIRSSRLRQRAVISVQQNDSDSTTEERHASPKYKLRQRKPKPLKLEQEETRVCRERRELPRRRLRRRARNKVTDTSSSDSTSSDDDDLLRKKHTAGNTSMQRKPPNRRASPPRDKGKFKLKDFTLDPTSIDSSITFKSIGGLDEQVRCLREMVVLPILYPEIFRMYQTNPPKGVLFHGPPGTGKTLMARALANECSVGNRKVTFFMRKGADLLSKWIGQTEKQMTLLFEQAAQMAPSIIFFDEIDGLAPARTARQEQVHVSVVASLLALMDGLDKSRGEVIVIGATNRLDALDPALRRPGRFDREIYFPLPSYNQRKEILNIILSEWPTKPSEGLITSLAERSVGYCGADLRALCTEAVLRCVRRTYPQIYESSYRLLIDPSKIKVEPCDFDNAASSLVPAGARSAPLHLSSTPPMYLEPLLAKPLKAAIDLITQSFPPAIKNISSNSAKESSSARLLISGGGSHLVANALLKEFEHLSVLTLDVVTLHNGLAGGPEEACIQVLNEARRNAPSILYLPRLNMWWDMANDTVKVLLQMMYSTFLTNVSSQITSILLLATIDVYTADFNNQILELFSGYRNEVLEVDIPTEEEREAFFRPLIIDVATKTPPPLVIQTQTVYEPLPRAPTPPPPPLSPRSKQLLLDKEEETLIELRIFLRDVCKKLASNKAFFMFTKPVDLEEVPDYLNVVEKPMDLETMMTKVDLHCYSSAQEFLMDIDLIQLNALTYNPDVTPADKQIRHRACWFRDYAYALIKAEMDTDFEENCRKIAKNRKARQTGDPYEFLPNHIRALAEEASTSNNNTATAEAIDSKNTEPNNPEENVINHKTAEENAESTAKIPVRTSPNRKRRVPSWAKGFLTGNRKKRKIGTRTSEEIKDTEEKIELKEEVAQTSDTELKDTSMDGLEKEKTEPDPPPSPPKLTPERRQSERRQSVSINKYDLNEVLAKTVSVTDGCSIDILCDLYMQLKLHIKKYTQSYNRQSLPQIRPDDNLPKLACLECIDKLQVSYLFRQTCLQSDTKLKLLYNVNNNSKSIKNEDTVEDNKPDHDLTDGIDDVLIKYEDHSDSDHHGDKENESPDEDDEEGDEVTKHQCSLCDATFESEANLKKHIVEHENKISRKSKQKSSKIDISFLEDQCKICNAPYCSKDFHLIKSRAHNEGKPFICKLCGKGFKQKAHLSVHWKTHTGEKSHTCNICMKSFITKSNLKTHKINKHFKTSENKDISKELEAARKSKTTDNYLCVECDEKFKSYIGYKKHMEIHSGERPFVCPECGMGFKQKIHLSIHTKSHTGEKQYGCDLCPKQFTTRSVLKAHILRVHSEDDLESNVHFQNDFNDEDSADDIKNDIKREEDGISDQEKSLQGDDEPKVKGLYACSQCDKSFLANAALQDHLRIHTGERPFVCDFCGKGFKQKAHLTIHKKSHTGEKSYTCDICSKSYITNSALRKHMQVRHATLPKPLVPKPRKRQTQKIYNCKYCPKTFFLKHMYIKHSRTHTGESPYMCEMCGKTFKQNSHLKSHKRMHTGEKPYPCNLCPKAFATGTELRVHKIIHSDEFPHKCSMCDKRFKWRITAWRHMMYHTGEKPNKCTICSKAFIEGGALRRHMRVHTGERPQKCNICYRTFKETSHLKTHMNIHNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00240322;
90% Identity: iTF_00240322;
80% Identity: iTF_00240322;