Bvim012315.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachylomia viminalis
Gene Symbol
br
Assembly
GCA_937001565.2
Location
CAKZJP020000111.1:1847977-1849771[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-28 2.5e-25 90.4 0.5 1 108 22 125 22 127 0.94

Sequence Information

Coding Sequence
ATGAATAATGCACCGCAGTTCTCTTTACGCTGGAATAATTACGTATCTCACGTAACAGAAGCGTTCAATGTTCTCCGTTTTGAAAACGATCTAGTGGATGTCACGCTGTGCTGCGATGGAGGCAAAATCAAGGCCCACAAAATGTTGTTATCTGCTTGTAGTAGTTACTTCAAGCAAATATTCAAAGAGAACCCATGTCAACATCCTGTGATTATATTCAGAAACTTCAAGTTCGAGGATCTCAATGCGATCATCAACTTTATGTACCATGGTGAGGTGAACATATTCCAAGAGCAATTAGAATCTTTCCTTATAACTGCTGAGCTCCTAGAGGTTAAGGGTTTGACAGATAACATGGAGGATGAATCATCTAAAAGCCAGTTGAGAATCACAGACAACACCTCTTTAGATTTAAGTTCTAAATCGAGTAGAACAACTGAGGATATTGTGCCTGTGTTGTCAGATGAACCAATTAATTTAGCCACAATGCAAAGTTCTAGAGAAGAGTACATTCCACAACCAATCACAATGGCCAACAACCCAAACAAAAGTATTCCAGAACAAGAAAATGGTATTGTTGAAATGCAGCCTGAAACTTCAAAGTCTGATGATAATGTAAAACTGAGAACAGCACCATCTACCAGTAGTGAAGAAATGCAAGTTGATACACAGACAACTTCAGTTGAAGATTTGTCAGAAAAAAGCAATTCCGAATCAGAACTGGCTAAGTTCCGCTGCCAACTCTGTCCAAAAGGTTTCAAGCATCCCACTTCATTGACACTGCACAAGGATTCACACGCAGGAAAGACACAATGTCCTGTGTGTCACCGGTCTTTCTCACGGTCCTATGATATGAGGAGTCATCTGCAAAGAATACACCAAGGGAAGCAACTGACCATCAAAGAGATCAGATACAAGAATACAAATGATAGTGTTGCCCCTAAGCAGTTTACCCATCACATTTAG
Protein Sequence
MNNAPQFSLRWNNYVSHVTEAFNVLRFENDLVDVTLCCDGGKIKAHKMLLSACSSYFKQIFKENPCQHPVIIFRNFKFEDLNAIINFMYHGEVNIFQEQLESFLITAELLEVKGLTDNMEDESSKSQLRITDNTSLDLSSKSSRTTEDIVPVLSDEPINLATMQSSREEYIPQPITMANNPNKSIPEQENGIVEMQPETSKSDDNVKLRTAPSTSSEEMQVDTQTTSVEDLSEKSNSESELAKFRCQLCPKGFKHPTSLTLHKDSHAGKTQCPVCHRSFSRSYDMRSHLQRIHQGKQLTIKEIRYKNTNDSVAPKQFTHHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00017466;
90% Identity
iTF_00238324; iTF_00041025; iTF_00042788; iTF_00044070; iTF_00041927; iTF_00040395; iTF_00042252; iTF_00043698; iTF_00040019; iTF_00041398; iTF_00043099; iTF_01363563; iTF_01363241; iTF_01362514; iTF_01362723; iTF_01286040; iTF_01285683; iTF_01362138; iTF_01361776; iTF_01340351; iTF_01339562; iTF_01339062; iTF_01340767; iTF_01118849; iTF_00852294; iTF_01230762; iTF_00851949; iTF_00112142; iTF_01119854; iTF_01119503; iTF_00111794; iTF_01118458; iTF_01342625; iTF_00050435; iTF_01342339; iTF_00050073; iTF_00831364; iTF_00908049; iTF_00831742; iTF_00908414; iTF_01094180; iTF_01095081; iTF_01093259; iTF_01095470; iTF_01093654; iTF_01094525; iTF_00809669; iTF_00783655; iTF_00784522; iTF_00785322; iTF_00273739; iTF_00785647; iTF_00274544; iTF_00274864; iTF_00784016; iTF_00809296; iTF_00274066; iTF_00810613; iTF_00784824; iTF_00810239; iTF_01527465; iTF_01526634; iTF_00037387; iTF_01527886; iTF_01192848; iTF_00623634; iTF_01193237; iTF_00622968; iTF_01526201; iTF_00036960; iTF_00186403; iTF_00186754; iTF_00018630; iTF_01377999; iTF_00018291; iTF_01377621; iTF_00072366; iTF_00000452; iTF_00001293; iTF_00072210; iTF_00001620; iTF_00000798; iTF_01425232; iTF_01425583; iTF_01538902; iTF_01539239; iTF_00017466; iTF_00017797; iTF_01221724; iTF_01222090; iTF_00364170; iTF_00364520; iTF_00122957; iTF_00122545; iTF_00758774; iTF_00124795; iTF_00124414; iTF_00758398; iTF_00924909; iTF_00925347; iTF_01247245; iTF_00120657; iTF_01440594; iTF_00121011; iTF_01247670; iTF_01440215; iTF_00888400; iTF_00888813; iTF_01026897; iTF_01029397; iTF_01031255; iTF_01026458; iTF_01031582; iTF_01029760; iTF_01064241; iTF_01063879; iTF_01062954; iTF_00928834; iTF_01534406; iTF_00446729; iTF_01063338; iTF_01065163; iTF_00301709; iTF_01532238; iTF_01533199; iTF_01535056; iTF_01084401; iTF_01084753; iTF_00301330; iTF_00446354; iTF_01062005; iTF_00445718; iTF_01062358; iTF_00712471; iTF_00447384; iTF_00712056; iTF_01064792; iTF_01533560; iTF_01535449; iTF_00445338; iTF_01532638; iTF_00447776; iTF_00929184; iTF_01534080; iTF_01117873; iTF_01117478; iTF_00121586; iTF_00121968; iTF_01030738; iTF_01030370; iTF_00173203; iTF_01441227; iTF_01441553; iTF_00173783; iTF_00450293; iTF_00450625; iTF_00685941; iTF_00685588; iTF_00772501; iTF_00772145; iTF_00973909; iTF_01231171; iTF_00974247; iTF_01085525; iTF_01085921; iTF_01027862; iTF_01027473; iTF_00375447; iTF_00375862; iTF_00425975; iTF_00425581; iTF_00668055; iTF_00667672; iTF_00300376; iTF_00300779; iTF_00449304; iTF_00449738; iTF_00071929; iTF_00071625; iTF_00952825; iTF_00953136; iTF_00374778; iTF_00374342; iTF_00850906; iTF_00851305; iTF_00302267; iTF_00302670; iTF_00951963; iTF_00952324; iTF_00123836; iTF_00123508; iTF_00148092; iTF_00147650; iTF_00726940; iTF_00726587; iTF_00177693; iTF_00177309; iTF_00906301; iTF_00906673; iTF_00038302; iTF_00037949; iTF_00185758; iTF_00185442; iTF_00907166; iTF_00907498; iTF_00038975; iTF_00039390; iTF_00172351; iTF_00171970; iTF_01028831; iTF_01028444;
80% Identity
iTF_00238324;