Bvim012667.2
Basic Information
- Insect
- Brachylomia viminalis
- Gene Symbol
- retn
- Assembly
- GCA_937001565.2
- Location
- CAKZJP020000116.1:378121-388978[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-20 1.2e-16 62.5 0.0 12 89 46 122 34 122 0.88 2 2 6.3 2.7e+04 -2.8 0.0 25 38 250 263 212 266 0.59
Sequence Information
- Coding Sequence
- ATGGTGACCATTACAACGTCATGGCATAGAAAAGTTACACATAATCTTGCACATCAAAGCGAGGTGCACTATCAAAAGATGACCAGAagagactccaagcatagctctctccatagctcgctgagcgactttaaacttatggaccagtctaaccGCACTCCAATCAACCGGCTACCGATAATGGCGAAGTCGGTGCTAGACCTGTATGAGCTGTACAACCTGGTGATAGCTCGCGGCGGGCTGGTGGAGGTCATCAATAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCGTCGTCCATCACGTCTGCTGCCTTCACGTTACGCACTCAATACATGAAATACTTGTATGACTATGAGTGCGAGAAGAAGAATCTTTCAACTAGGAGCGAGCTGGATGCCGCCATTGAGGGCAACAAGCGTGAGGGGCGCCGCGCATCGGGACAATACGACGCACAAGCTGCTTTAGCCATGCCCTCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCACTGTCGCTGTCGTTGGGAGGTATCGCGCCGCGCttgccgccgctgccgccgcaCGCGCCTCATCTCGCGCAGCACGACATCGAGTACAGGGTGCGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCGCCCCCAAGCAATGGCCCAGCACCAATAATGTCACCTCGCGACGCAGCCGCCCTCAGTGCCATAGACGTCTCCCGCCTCACTCTCTGGTCGCTctacaacaataacaacaacaacagcccACAACAGGACCTTGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTGACGAGCAGCGGCAAGCGCGAGGCGTGTCGctcgcccgcgccgcccgccaaGCGCCGCACGCCGCTGCCCCCCTCGCGCCCCGGCTCGCGCGCCGCGTCCCCGCGCGACGTGGCGTCGCCGCCGCAGCACCGCCACAGCCGCAGGGACGCCACGTCACCGCCACAGATCCACGGCATGCCCAATTCCAACGGTGTCAATGGAGCTGCCTTCAAGATTACTACCAGAGGAGATGCGAGCACAGGTGACCAGCAGCTGGTAGTATCAATAGAGCTAAACGGAGTCACGTATGAAGGAGTACTCTTTCCCTCAGGCAACGGTCAAAATGGACACAGACAAATGGTGtcctaa
- Protein Sequence
- MVTITTSWHRKVTHNLAHQSEVHYQKMTRRDSKHSSLHSSLSDFKLMDQSNRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRVPASLAQLSQHMQPLSLSLGGIAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQQDLEPQREALNLSESPNSLTSSGKREACRSPAPPAKRRTPLPPSRPGSRAASPRDVASPPQHRHSRRDATSPPQIHGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -