Bmaj007217.1
Basic Information
- Insect
- Bombylius major
- Gene Symbol
- lrrfip2
- Assembly
- GCA_932526615.1
- Location
- CAKOBF010000122.1:373476-385196[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.58 6e+03 -3.6 4.4 30 68 65 108 51 134 0.48 2 6 2 2.1e+04 -15.5 22.3 26 166 138 283 136 290 0.58 3 6 0.48 4.9e+03 -3.3 7.0 198 277 230 304 216 317 0.54 4 6 0.24 2.4e+03 -2.3 2.5 55 81 343 369 281 391 0.42 5 6 5.5e-113 5.6e-109 364.2 35.0 1 299 406 691 406 692 0.93 6 6 0.15 1.5e+03 -1.7 3.4 215 245 716 745 695 766 0.51
Sequence Information
- Coding Sequence
- ATGGTTCAATTAAAGTTTGAAAGTTCATTAATTGGAAAATTTACAAGAAGTTGGGAACCATCATTAAGTGACTGTCTGGAAATAGATTCATCTTTACAAAATGGTATTGCAAATAAAGGAACATGGAGATATtattattcattcataatgtcacaagttcatcaagaacaacagcagcagcaacaacaacatcatgaacagcaaatgttaattgcatttgaatgccataaaaattcagatacatcagcaattactgaaaaaattgataatgcagaatcaaaaacaacaacaacaacaacagcagtaagtgagaatgaaatatcaccaacaacaacagcaacagtaacaacaacaacagaaatcagtaattcaaataatttgaatgttgatgttgaaaatagtgattgttgtaaacaaaaaaatcaaaacactaatattaataaagaattttgtaatagcaacagcaatcataataaaaatactaataataatcatagtgatcatagtgataatacaatgacaaatatcaaaagtaataaagattatgaaaatgataataaaaataatgaagacgacaatgacgatgacaaatatgaagattgtgatgatgaaagtgaatcaaatgatgaaaaatttgattttagtgatagtgaattagatgatttaattaataatgacaattatgggaatcatcagaattcaaatataacaacaacaaataataataatgaaaatcttacaataaatgaaactaatttagaacaacaattaaaaaatgctgatgatgatgaatgtgataatgtaaaacaatccttaaaacatcaacaaaatgatttacaaatggaacaacaaaatactgaatgtaatgagaaatccgatagttcatttggaaaaaatgaaattgatgtagatgaaaatgttgatttaaaaattatagaaaaaaatcaattaaatgatgatgaaattgttgttgttacggaagcaataaatgatgatgtattaaataatggtcaaaatttatctgcaataacaacgacaacaacaacaaagacaacggcaacaacaacagaatcaacaacaataccatcaaatcatcaccttgaaaatgaacaatcaaattgtggtcatgatgtagatgacaataatgatgatcaatattatagcgatgaagaggatgaATTTATTGTAAATTTTCTAGGAATGGCTAATCAAATAGCAGAGGCTAGATTAGCGGCTCGACGGCAAGCACGTGCTGAAGCTCGCGAAATACGAATGCGTGAACTGGAACGTCAACAAAAAGAACAAGAACAAAATGCTGATAGAGTATTTGATATGCAAACAGCAGCTGGCATTGATCCTTTATCAAGATCACGACTTACAATTTCAGTTGCAAATTCTACAAGGGGTAATTCAATGTCATCACGACGTAGTAGTGAAGATTCCCTGGAAGAGGAGGGAAGAAGTTTACGTGATATTAGACATGAGTTAAAGGATGTTGAAGAAAGATTTCGTAAGGCGATGATAGCAAATGCCCAATTAGATAATGAAAGAGCATCACAATCTTATCAAATTCAATTATTAAAAGATAAACTAGAAGAAATGGAAGAATCATACGCTCAATTACAAAGAGAGTATAAAGAAAAATGTCGTGATCATAACGCTTTAAAACGTAATTTGGATAAACTGGAAGAAGAATTGAAATTAGTACGTGGCCAATTAGATGAAAGAGATACACTCATAGCTGAACAGGGTTTAGTTATAGTATTGGTAGAAAATGAAAATGGCACTGATGCCAAACGTGCTCTAGTCACTATGGAAAATGCACAACTATTAGGTTCTGTTCAAGGTTCTTTAGATGTACGACTTAAGAGATTCACTGAAGAAAAACAACAATTGCAAAAAGAAGTCCAAAGTCTTCAACAGCAATTAAATGATGTAAAGACACAGGGAAGAAGGGGTAGTTCTATGAATGGTCCTTTAGGAGCGGATGATGATTATGATGCTCAAAGAGAAGCGAACAAAATTATAGCAGATTACAAATATAAACTACAGAAAGCCGAACAAGAAATAGCTAGTCTACAAGCAAGTTTAGCAAGATCAGAAACACAAGTAATACGTTATAAAAGTACAGCAGAAGCAGCAGAAAAAGCTGAATCTGAATTAAAAATTGAACGAAGGAAACTTCAAAGAGAGaatcgtgaagcaatggaacgacttgaagaattggaaacagcaaataatcatttattaaaacgcttagataaactaaaaaatgcaaaaagtgcattattaaaagatctttga
- Protein Sequence
- MVQLKFESSLIGKFTRSWEPSLSDCLEIDSSLQNGIANKGTWRYYYSFIMSQVHQEQQQQQQQHHEQQMLIAFECHKNSDTSAITEKIDNAESKTTTTTTAVSENEISPTTTATVTTTTEISNSNNLNVDVENSDCCKQKNQNTNINKEFCNSNSNHNKNTNNNHSDHSDNTMTNIKSNKDYENDNKNNEDDNDDDKYEDCDDESESNDEKFDFSDSELDDLINNDNYGNHQNSNITTTNNNNENLTINETNLEQQLKNADDDECDNVKQSLKHQQNDLQMEQQNTECNEKSDSSFGKNEIDVDENVDLKIIEKNQLNDDEIVVVTEAINDDVLNNGQNLSAITTTTTTKTTATTTESTTIPSNHHLENEQSNCGHDVDDNNDDQYYSDEEDEFIVNFLGMANQIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTAAGIDPLSRSRLTISVANSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESYAQLQREYKEKCRDHNALKRNLDKLEEELKLVRGQLDERDTLIAEQGLVIVLVENENGTDAKRALVTMENAQLLGSVQGSLDVRLKRFTEEKQQLQKEVQSLQQQLNDVKTQGRRGSSMNGPLGADDDYDAQREANKIIADYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAESELKIERRKLQRENREAMERLEELETANNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00233899;
- 90% Identity
- iTF_00233899;
- 80% Identity
- -