Bdis005339.2
Basic Information
- Insect
- Bombylius discolor
- Gene Symbol
- lrrfip2
- Assembly
- GCA_939192785.1
- Location
- CALNDV010000348.1:48127-63995[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.31 1.8e+03 -2.1 3.2 24 63 80 124 74 148 0.60 2 5 3 1.7e+04 -12.5 15.2 26 168 151 292 149 298 0.57 3 5 0.36 2.1e+03 -2.3 3.8 227 277 267 318 258 332 0.47 4 5 1.1e-112 6.2e-109 363.9 35.1 1 299 414 699 414 700 0.93 5 5 0.39 2.2e+03 -2.4 4.0 221 244 729 752 704 774 0.46
Sequence Information
- Coding Sequence
- ATGGAGAGCCCCGGCGCTGTAGGACGGCGTCGAGGTAGTTCTCGAGTAAATGCTGAAGATCAAGCATTGGATTTAATTGCAAAAGAGTTTGAAAGTTCATTAATTGGAAAATTTACAAGAAGTTGGGAACCATCATTAAGTGACTGTCTGGAAATAGATTCATCTTTACAAAATGGTATTGCAAATAAAGGAACATGGAGATATTATTATTCATTCATAATGTCAGAAGTTCATCAAGAACAACAACAACAACAACATGAACAACAAATGGCAATTGCATTTGAATGCCATAAAAATTCAGATACATCAGCAATTACTGAAAAAATTCAAAATGCAGAATCAAAAACAACAACAACAGCAGTAAATGAAACTGAATTATCACcaacaacaacagcaatcagtaatttcaataatttgaatgttgatactgatgttgaaagtgattgttgtaaacaaaaaaatcaaaacactaatattaataaagaattttgtaatagcaatcataataaaaataataataatcatagtgatcatagtgataatacaatgacaaatataaaaagtaataaagattatgaaaatgataataacaaagataatgacgacgatgacgacaaatatgaagattgtgatgatggagatgttgaaagtgaatcaaatgaagaaaaatttgatttcagtgatagtgaattagatgatttaattaataatgacagttatgggaatcaccagaattcaaatattacaacaaatattaatgaAAATTTTGTTATAAATGAAACTACTTTAGAACAATTAAAAATTGCTGATGAATGTGATAATGTAAAACAATCCTTAAAACATCAACAAAATGATTTACAAGTGGAACAAAAACAACAACAAAATACTGAATGTAATAATGAATATTATGAGAAATCCGACAGTTCATTTGGAAAAAATGAAATTGATGTAGATGACAATGTTGATTTAAAAATTATAGAAAAAAATCAATTAAATGATGATGAAATTGTTGTTACGGAAGCAATAAATGATGATGTATTAAATGATCAAAAtttatctgcaataacaacaacgacgacgacaacagaatcaacaacaataatatcaaatcatcaccttgaaaatgaacaatctaattgtggtcatgctgctcatgtagatgacaataatgatgatcaatattatagcgatgaagaggatgaATTTATTGTAAATTTTCTAGGAATGGCTAATCAAATAGCAGAGGCTAGATTAGCGGCTCGACGGCAAGCACGTGCTGAAGCTCGCGAAATACGAATGCGTGAACTGGAACGTCAACAAAAAGAACAAGAACAAAATGCTGATAGAGTATTTGATATGCAAACAGCAGCTGGTATTGATCCTTTATCAAGATCACGACTTACAATTTCAGTTGCAAATTCGACAAGGGGTAATTCGATGTCATCACGACGAAGTAGTGAAGATTCCCTGGAAGAGGAGGGAAGAAGTTTACGTGATATTAGGCATGAGTTAAAGGATGTTGAAGAAAGATTTCGTAAGGCGATGATAGCAAATGCCCAATTAGATAATGAAAGAGCATCACAATCTTATCAAATTCAATTATTAAAAGATAAACTAGAAGAAATGGAAGAATCATACGCTCAATTACAAAGAGAATATAAAGAGAAATGTCGTGATCATAACGCTTTAAAACGTAATTTGGATAAACTGGAAGAAGAATTGAAATTAGTACGTGGGCAACTAGATGAAAGAGATACACTTATAGCTGAACAGGGTTTAGTTATAGTATTGGTAGAAAATGAAGATGGCACTGATGCCAAACGTGCTCTAGTCACTATGGAAAATGCACAACTATTAGGTTCTGTTCAAGGTTCTTTAGATGTACGACTTAAGAGATTCACTGAAGAAAAACAACAATTGCAAAAAGAAGTCCAAAACCTTCAACAGCAATTAAATGATGTAAAGACACAGGGAAGAAGGGGTAGTTCTATGAATGGTCCTTTAGGAGCAGATGATGATTATGATGCTCAAAGAGAAGCGAATAAAATTATAGCAGATTACAAATATAAACTACAGAAAGCAGAACAAGAAATAGCTAGTCTACAAGCAAGTTTAGCAAGATCAGAAACACAAGTAATTCGCTATAAAAGTACCGCGGAAGCAGCAGAAAAAGCTGAAGCTGAATTAAAAATTGAGCGAAGGAAACTTCAAAGAGAGaatcgtgaagcaatggaacgacttgaagaattggaaacagcaaataatcatttattaaaacgcttagataaactaaaaaatgcaaaaagtgcattattaaaagacctttga
- Protein Sequence
- MESPGAVGRRRGSSRVNAEDQALDLIAKEFESSLIGKFTRSWEPSLSDCLEIDSSLQNGIANKGTWRYYYSFIMSEVHQEQQQQQHEQQMAIAFECHKNSDTSAITEKIQNAESKTTTTAVNETELSPTTTAISNFNNLNVDTDVESDCCKQKNQNTNINKEFCNSNHNKNNNNHSDHSDNTMTNIKSNKDYENDNNKDNDDDDDKYEDCDDGDVESESNEEKFDFSDSELDDLINNDSYGNHQNSNITTNINENFVINETTLEQLKIADECDNVKQSLKHQQNDLQVEQKQQQNTECNNEYYEKSDSSFGKNEIDVDDNVDLKIIEKNQLNDDEIVVTEAINDDVLNDQNLSAITTTTTTTESTTIISNHHLENEQSNCGHAAHVDDNNDDQYYSDEEDEFIVNFLGMANQIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTAAGIDPLSRSRLTISVANSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESYAQLQREYKEKCRDHNALKRNLDKLEEELKLVRGQLDERDTLIAEQGLVIVLVENEDGTDAKRALVTMENAQLLGSVQGSLDVRLKRFTEEKQQLQKEVQNLQQQLNDVKTQGRRGSSMNGPLGADDDYDAQREANKIIADYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETANNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00234792;
- 90% Identity
- iTF_00234792;
- 80% Identity
- -