Bmaj015757.1
Basic Information
- Insect
- Bombylius major
- Gene Symbol
- PAXBP1
- Assembly
- GCA_932526615.1
- Location
- CAKOBF010000466.1:120905-126601[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.45 9.2e+03 -3.9 0.8 53 94 99 150 87 162 0.54 2 2 5.3e-35 1.1e-30 107.4 0.1 2 272 597 807 596 809 0.94
Sequence Information
- Coding Sequence
- ATGTCATTGTTTCGAAAGCCAAAAAAAACAATACAACGACGTGTTTTTATGGCAAATGATGAAGGAGACGCCGAAAACAATTCCAATAATGATGAAATGGATATTGATGAACCAACACCACAAATAACATCCTCTATTAATCAGACAATTAAAAAAGAAAAGAAAAAAGATAAAAATAAAAAATCTGATGATACAAAATCTAAAAAATCATTATTAAGTTTTGCTGATGATGAAGATGAAGGAGAAGTATTTCAGGTGAAAAAATCATCACATAGTAAAAAAATGATGAGAATGTTGGATAAAGAAAGACGACGAAAGAAACATTTAAAAGATGATAATAATAAAAATAATGATAATGATAATAAATCTACAATTAATAAAAATTCAAATAATAATAGTAGTAATAATTATGATCAAATATCTTCATCATCGTCCTCTACTTCCACCCAAAATAAAAATAATAAAAATTCTGATTGTATTCAAACTGAAATACGCACAGACGACTTTGTGCTCGTCGTTAAAAAATCTGAACCAGAAAATGTTATTCTTAATGGTAGAGCAGCATTATGTGCTGGTCGTGATGATATGTCATCAGAAGATGAAGAAGATAATAATGAAACAGAAAATCATAGATTCGCTAAGCCAGATAATTTTAAATTAGTTTTAGAGAGCGGATCAATTCCTGATGCAGCAATGATTCATGCAGCAAGAAAAAGACGACAAAAGGCTAGAGAACAAGGTGATTTTATTCCTATTGAGGAACAAACAAAAGAAATACGACATGGAAAACGACTTGTTCGTGAAGAAAATGATGATGATGGCTCTGATGAAGAAGAAAGAGTTGATATGAATGCAATAACTGGAATTAAAGAGATCGAAGAGAGACGTGAAAAATTCTATTCGGTTCAGAATGAATATTCCGGTGATGATTCAGATTTAGAAACTAATGAATGGGAGAATCAACAAATTCGTAAAGGAGTTACTGGTGCACAGCTTGTTACGGCCGTTCAAGGACAAGTTCTATCACAGTTTGTAATAAAACCAAGTGCTTATATTGACGATAATATTCCACAATCAACAGCAACACTTCTCGAACAGGCATATGCTAAAAATTGTTTAGAAAAACCACGTCAAATATTATTGTCAACACAAAATAATGAATCTAAACCATCAGGTCCACGAAATCCACAAGAAATTAATGATACAGTTCGAAATAGGCTAATACAACTTAAACAACTCAATAATAAACATCTAACAGATATTGAAAGAATCATTCAAGATTTAAGGAATGCTAAAATTGAAGCATTGGAATGTACACAAAAAGCACCAGCTGCTGCTGCAAAATATCGTTTTTATCAAGAGTTACGTGGGTATGTCACAGACTTGGTTGAATGTCTTGATGAAAAGGCACCAAAATTAATTGATGTGGAAAAACGAGTACTTCAAGTATTTTCAAAACATGCAAATTATTTAATTGAAAGAAGACGACAGGATGTTAGAGATCAAGCAAAAGAAATTTCAGATTTATCAAAGCCAAGTAGTAGTTCCACGAAAAAGGATCGTGAGCATGAAGAGCATGTACGAAGAACAGCTGCACGTGAAGGAAGACGTACTCGTCGTCGTTTTGAACGTGAAAAAAACGAATTTATGAGTTCACATTTAGATGGAATGTCAAGTGATGATGAAAGACCAGATCAGGATGTCGCACAATATAACAAAAATTTAGATCAATTAGAAGTTGAAGTAGATGATTTATTTGCTGATACACGTGATGAATTTTGTAAAATTGAAAATATTTTATTAAAATTTGAAATATGGCGTAATACAGATATGGATTCATATAAGGAAGCATTTGTTAGTTTATGTTTACCAAAGATAATTGGTCCATTAGTTCGTGTACAATTATTACGTTGGTATCCCTTAGAAGATAGATATCAAGAAATTGAAAAAATGGATTGGTATGCAGTTTGTATGAGATATGGTTTTGCAGAAAATGAAACTGAAGATTCTTTAGCACGTGATCCAGATGTTAGATTTGTTCCAACATTAATTGAAAAAATTGTTTTACCAAAATTAACAGAAATTATTGAAAATTGCTGGGATCCACTTTCAACATCACAAACACTACGATTAATTGGTTTAATAAATCGTTTAGGAAGAGATTATCCATCATTAAGGGAATCATCAAAATCTTTACAAACATTATTCAATTCAATTTTAGATAAAATAAAATCATCATTGGATAATGATGTTTTTATTCCTATTTTTCCGTCTAAAATTCAAGAGGCAAAATCATCATTCTTTCAGAGGCAATTTTGTAGTGGACTTAAACTATTTCGTAATATTCTCAGTTGGCAGGGTGTTATTGCTGATAAAACTTTAATTGAATTAGCAATATCATCTTTACTCAATAGATATCTTTTATCTGCAATGAGGGTTTGCACACAACAAGATGCAATTGCAAAAGCAAATCTGGTTGTAAATACTCTTCCAACAGCATGGTTACAACCAGATTCAAGTGTTCTTGAGAGCTTAGTCAATTTTATTGCATTTGTTAAATATATTTTAGAGCAATTAGATAAAAAGAATCCACTTCAAATATCAATGTATGAAAAAGCAAAACAAACTTTACAAAGGCTTCATTGTTATTAA
- Protein Sequence
- MSLFRKPKKTIQRRVFMANDEGDAENNSNNDEMDIDEPTPQITSSINQTIKKEKKKDKNKKSDDTKSKKSLLSFADDEDEGEVFQVKKSSHSKKMMRMLDKERRRKKHLKDDNNKNNDNDNKSTINKNSNNNSSNNYDQISSSSSSTSTQNKNNKNSDCIQTEIRTDDFVLVVKKSEPENVILNGRAALCAGRDDMSSEDEEDNNETENHRFAKPDNFKLVLESGSIPDAAMIHAARKRRQKAREQGDFIPIEEQTKEIRHGKRLVREENDDDGSDEEERVDMNAITGIKEIEERREKFYSVQNEYSGDDSDLETNEWENQQIRKGVTGAQLVTAVQGQVLSQFVIKPSAYIDDNIPQSTATLLEQAYAKNCLEKPRQILLSTQNNESKPSGPRNPQEINDTVRNRLIQLKQLNNKHLTDIERIIQDLRNAKIEALECTQKAPAAAAKYRFYQELRGYVTDLVECLDEKAPKLIDVEKRVLQVFSKHANYLIERRRQDVRDQAKEISDLSKPSSSSTKKDREHEEHVRRTAAREGRRTRRRFEREKNEFMSSHLDGMSSDDERPDQDVAQYNKNLDQLEVEVDDLFADTRDEFCKIENILLKFEIWRNTDMDSYKEAFVSLCLPKIIGPLVRVQLLRWYPLEDRYQEIEKMDWYAVCMRYGFAENETEDSLARDPDVRFVPTLIEKIVLPKLTEIIENCWDPLSTSQTLRLIGLINRLGRDYPSLRESSKSLQTLFNSILDKIKSSLDNDVFIPIFPSKIQEAKSSFFQRQFCSGLKLFRNILSWQGVIADKTLIELAISSLLNRYLLSAMRVCTQQDAIAKANLVVNTLPTAWLQPDSSVLESLVNFIAFVKYILEQLDKKNPLQISMYEKAKQTLQRLHCY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118690; iTF_00233898;
- 90% Identity
- iTF_00233898;
- 80% Identity
- -