Bdis015113.1
Basic Information
- Insect
- Bombylius discolor
- Gene Symbol
- PAXBP1
- Assembly
- GCA_939192785.1
- Location
- CALNDV010001819.1:13602-19039[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.72 6.2e+03 -3.6 0.1 69 107 18 56 4 60 0.74 2 3 0.33 2.9e+03 -2.5 1.0 51 99 97 154 85 165 0.67 3 3 9.1e-34 7.9e-30 104.3 0.1 2 272 595 805 594 807 0.94
Sequence Information
- Coding Sequence
- ATGTCAATGTTTCGAAAGCCAAAAAAAACAATTCAACGACGTGTTTTTATGGCAAATGATGAAGGAGACGCCGAAAACAATTCCAATAATGATGAAATGGATATTGATGAATCAACACCACAAATAACATCCTCTGTTAATCAGACAATAAAAAAAGAAAAGAAAAAAGATAAAAATAAAAAATCTGATGATACAAAATCTAAAAAATCATTATTAAGTTTTGCTGATGATGAAGATGAAGGAGAAGTATTTCAGGTGAAAAAATCATCACATAGTAAAAAAATGATGAGAATGTTGGATAAAGAAAGACGTCGAAAGAAACATTTAAAAGATGATAATAATAAAAATAATGATAATGATAATAAATCTACAATTAATAAAAATTCAAATAATAGTAGTAGTAATTATGATCAAATATCTTCATCATCGTCCTCTACTTCCACCCAAAATAAAAATAATAAAAATTCTGATTGTATTCAAACTGAAATACGCACAGACGACTTTGTGCTCGTCGTTAAAAAATCTGAACCAGAAAATGTTATTCTTAATGGTAGAGCAGCATTATGTGCTGGTCGTAATGATATGTCATCAGAAGATGAAGAAGATAACAATGAAACAGGAAATCATAGATTCGCTAAACCAGATAATTTTAAATTAGTTTTAGAGAGTGGATCAATTCCTGATGCAGCAATGATTCATGCAGCAAGAAAAAGACGACAAAAAGCTAGAGAACAAGGTGATTTTATTCCTATTGAAGAACAATCAAAAGAAATACGACTTGGAAAACGACTTGTTCGTGAAGAAAATGATGATGATGGCTCTGATGAAGAAGAAAGAGTTGATATGAATGCAATAACTGGAATTAAAGAGCTCGAAGAGAGACGTGAAAAATTCTATTCTGTTCAGAATGAATATTCCGGTGATGATTCAGATTTAGAAACTAATGAATGGGAGAATCAACAAATTCGTAAAGGAGTTACTGGTGCACAGCTTGTTACAGCCGTTCAAGGACAAGTTCTGTCACAATTTGTAATTAAACCAAGTGCTTATATTGACGATAATATTCCACAATCAACAGCAACACTCCTCGAACAGGCATATGCTAAAAATTGTTTAGAAAAACCACGTCAAATATTATTGTCAACACAAAAGAATGAATCTAAACCATCAGGTCCACGAAATCCACAAGAAATTAATGATACAGTTCGAAATAGGCTAATACAACTTAAACAACTCAATGATAAACATCTAACAGATATTGAAAGAATCATTAAAGATTTAAGGAATGCTAAAATTGAAGCATTGGAATGTACACAAAAAGCACCAGCTGCTGCTGCAAAATATCGTTTTTATCAAGAGTTACGTGGGTATGTCACAGACTTGGTTGAATGTCTTGATGAAAAGGCACCAAAATTAAGTGATGTGGAAAAACGAGTACTTCAAGTATTTTCAAAACATGCAAATTATCTAATTGAAAGAAGACGGCAGGATGTTAGAGATCAAGCAAAAGAAATTTCAGATTTATCAAAGCCAAGTAGTTCCACGAAAAAGGATCGTGAGCATGAAGAGCATGTACGAAGAACAGCTGCACGTGAAGGAAGACGTACTCGTCGTCGTTTTGAACGTGAAAAAAATGAATTTATGAATTCACATTTAGATGGAATGTCAAGTGATGATGAAAGACCAGATCAGGATGTCGCACAATATAAAACAAGTTTAGATCAATTGGAAATTGAAGTCGATGATTTATTTGCTGATACACGTGATGAATTTTGTAGAATTGAAAATATTTTATTAAAATTTGAAATATGGCGCAATACAGATATGGATTCATATAAAGAAGCATTTGTTAGTTTATGTTTACCTAAGATAATTGGTCCATTAATTCGTGTACAATTATTACGTTGGTATCCCTTAGATGATAGATATCAAGAAATTGAAAAAATGGATTGGTATGCAGTTTGTATGAGATATGGTTTTACAGAAAATGAAACTGAATATTCTTTAGCACGTGATCCAGATGTTAGATTTGTTCCAACATTAATTGAAAAAATTGTTTTACCAAAATTAACAGAAATTATTGAAAATTGCTGGGATCCACTTTCATCATCACAAACACTACGATTAATTGGTTTAATAAATCGTTTAGGAAGAGATTATCCATCATTAAGGGAATCATCAAAATCATTACAAACTTTATTTAATTCAATTTTAGATAAAATTAAATCATCATTGGATAATGATGTTTTTATTCCTATTTTTCCGTCTAAAGTTCAAGAGGCAAAATCATCATTCTTTCAGAGGCAATTTTGTAGTGGACTTAAACTATTTCGTAATATTCTCAGCTGGCAGGGTGTTATAGCGGATAAAACTTTAATTGAATTAGCAATATCATCGTTACTCAATAGATATCTTTTATCTGCAATGAGGGTTTGCACACAACAAGATGCAATTTCAAAAGCAAATCTGATTGTAAATACTCTTCCAACAGCATGGTTACAACCAGATTCCAGTGTTCTAGAGAGCTTAGTCAATTTTATTGCATTTGTTAAATATATTTTAGAGCAATTAGATAAAAAGAATCCTCTTCAAATATCAATGTATGAAAAAGCAAAACAAACTTTACAAAGGCTTCATTGTTATTAA
- Protein Sequence
- MSMFRKPKKTIQRRVFMANDEGDAENNSNNDEMDIDESTPQITSSVNQTIKKEKKKDKNKKSDDTKSKKSLLSFADDEDEGEVFQVKKSSHSKKMMRMLDKERRRKKHLKDDNNKNNDNDNKSTINKNSNNSSSNYDQISSSSSSTSTQNKNNKNSDCIQTEIRTDDFVLVVKKSEPENVILNGRAALCAGRNDMSSEDEEDNNETGNHRFAKPDNFKLVLESGSIPDAAMIHAARKRRQKAREQGDFIPIEEQSKEIRLGKRLVREENDDDGSDEEERVDMNAITGIKELEERREKFYSVQNEYSGDDSDLETNEWENQQIRKGVTGAQLVTAVQGQVLSQFVIKPSAYIDDNIPQSTATLLEQAYAKNCLEKPRQILLSTQKNESKPSGPRNPQEINDTVRNRLIQLKQLNDKHLTDIERIIKDLRNAKIEALECTQKAPAAAAKYRFYQELRGYVTDLVECLDEKAPKLSDVEKRVLQVFSKHANYLIERRRQDVRDQAKEISDLSKPSSSTKKDREHEEHVRRTAAREGRRTRRRFEREKNEFMNSHLDGMSSDDERPDQDVAQYKTSLDQLEIEVDDLFADTRDEFCRIENILLKFEIWRNTDMDSYKEAFVSLCLPKIIGPLIRVQLLRWYPLDDRYQEIEKMDWYAVCMRYGFTENETEYSLARDPDVRFVPTLIEKIVLPKLTEIIENCWDPLSSSQTLRLIGLINRLGRDYPSLRESSKSLQTLFNSILDKIKSSLDNDVFIPIFPSKVQEAKSSFFQRQFCSGLKLFRNILSWQGVIADKTLIELAISSLLNRYLLSAMRVCTQQDAISKANLIVNTLPTAWLQPDSSVLESLVNFIAFVKYILEQLDKKNPLQISMYEKAKQTLQRLHCY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00234791;
- 90% Identity
- iTF_00234791;
- 80% Identity
- -