Basic Information

Insect: Bombus waltoni
Gene Symbol: -
Assembly: GCA_014737395.1
Location: JACXII010000069.1:945738-949936[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.73 58 4.3 4.5 2 23 242 264 241 264 0.96

2 21 4.4 3.5e+02 1.9 2.3 1 23 314 336 314 336 0.91

3 21 0.18 14 6.2 1.8 1 23 385 407 385 407 0.98

4 21 0.029 2.3 8.7 0.2 1 20 463 482 463 484 0.94

5 21 2.1 1.6e+02 2.9 4.4 1 23 496 519 496 519 0.95

6 21 0.075 5.9 7.4 1.2 1 23 524 546 524 546 0.96

7 21 0.00042 0.033 14.5 0.2 1 23 595 617 595 617 0.97

8 21 0.00062 0.049 14.0 0.1 1 23 623 645 623 645 0.97

9 21 1.5e-07 1.2e-05 25.3 0.4 2 23 688 710 688 710 0.96

10 21 0.27 22 5.7 0.6 2 19 718 735 717 740 0.77

11 21 0.013 1 9.8 3.2 1 23 748 771 748 771 0.92

12 21 0.0007 0.055 13.8 0.6 1 23 778 800 778 800 0.95

13 21 0.18 14 6.3 0.3 1 20 855 874 855 874 0.96

14 21 0.00049 0.038 14.3 0.1 1 23 893 915 893 915 0.98

15 21 0.0017 0.14 12.6 1.4 1 23 929 951 929 951 0.97

16 21 0.0023 0.18 12.2 2.3 3 23 975 996 974 996 0.94

17 21 0.014 1.1 9.8 1.8 2 23 1048 1070 1047 1070 0.94

18 21 0.005 0.4 11.1 1.0 3 23 1101 1122 1100 1122 0.93

19 21 0.013 0.99 9.9 0.1 1 23 1129 1153 1129 1153 0.96

20 21 0.012 0.97 9.9 1.3 1 23 1158 1181 1158 1181 0.98

21 21 0.05 4 8.0 0.9 2 23 1211 1233 1211 1233 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.73	58	4.3	4.5	2	23	242	264	241	264	0.96
2	21	4.4	3.5e+02	1.9	2.3	1	23	314	336	314	336	0.91
3	21	0.18	14	6.2	1.8	1	23	385	407	385	407	0.98
4	21	0.029	2.3	8.7	0.2	1	20	463	482	463	484	0.94
5	21	2.1	1.6e+02	2.9	4.4	1	23	496	519	496	519	0.95
6	21	0.075	5.9	7.4	1.2	1	23	524	546	524	546	0.96
7	21	0.00042	0.033	14.5	0.2	1	23	595	617	595	617	0.97
8	21	0.00062	0.049	14.0	0.1	1	23	623	645	623	645	0.97
9	21	1.5e-07	1.2e-05	25.3	0.4	2	23	688	710	688	710	0.96
10	21	0.27	22	5.7	0.6	2	19	718	735	717	740	0.77
11	21	0.013	1	9.8	3.2	1	23	748	771	748	771	0.92
12	21	0.0007	0.055	13.8	0.6	1	23	778	800	778	800	0.95
13	21	0.18	14	6.3	0.3	1	20	855	874	855	874	0.96
14	21	0.00049	0.038	14.3	0.1	1	23	893	915	893	915	0.98
15	21	0.0017	0.14	12.6	1.4	1	23	929	951	929	951	0.97
16	21	0.0023	0.18	12.2	2.3	3	23	975	996	974	996	0.94
17	21	0.014	1.1	9.8	1.8	2	23	1048	1070	1047	1070	0.94
18	21	0.005	0.4	11.1	1.0	3	23	1101	1122	1100	1122	0.93
19	21	0.013	0.99	9.9	0.1	1	23	1129	1153	1129	1153	0.96
20	21	0.012	0.97	9.9	1.3	1	23	1158	1181	1158	1181	0.98
21	21	0.05	4	8.0	0.9	2	23	1211	1233	1211	1233	0.94

Sequence Information

Coding Sequence: ATGGACGAGGTGGTGGAGTTGCAGAATATGGAAAACGCGTGTAGGCTCTGCCTGTCCACCGATGAGCCAAAATTTTCGGTGTTCGAAACGGAAGACTCTCCGGTGTCCATGGCCAGCAAGATACAAGCTTGTCTATCGATTCAGATTTTAATAACCGATAGATTATCAACCAAAATATGTGAGCAATGTATTAAAAATATAAATGTATGGCATAATTACAAGGAAACGTGTTTGCGTTCACAAGAAAAGTTGAATCGGTGGTTGGAACAATACCTGCAACAGAATCCAATGATTGTAACTATTAAGGATGAACCTGTTGATTTGGAATTTTGCGAAGACAATATCGAGATTATTTCAGAATCTAGCAATGATTTGAACTTGGAAGCTGCTAATCTTGAAGAAAATATAAATCCTTTAGAAAATAATCATCAAGATCAGGAATTATCTGACAATGAAATAGTTTTAAACAGAGATCAACCAGCTTTAACAAAAGACATCATTTGTATAAAATCTGAACTACAAGATGATTATGACACAGATTGTACTATAGAAATTGAATCTATTACTGGCAGTGAACTTGTTTTGAATCCCCTTTCAAGCTCAGAGGATAGGGTTATGGAAGCTGATTCCACTCAGAAATCTAATGCATCCGCATCAGCAAGCAAGAAGAAAATCAGAAGAGGTCCACACACCCATTTTAGGGGTGCACGTGTTTTTAAACAGAAATGTGTACATTGCCAAATTAATTTGCATTCTAAGTATTCTTATGCAAAGCATATGGAAAGATTTCATAGTGACAAACAGAATGGTAGTGTTAATCAATCGGAATTGGAAGATGAGGAAGAGCTTATTGAAGATTTGGAGGATGAATTAATGAGCATGGAAAAGGATGCTCCATTGACACAAGTGCAGCAAAATATTATAAGTCAATTGAAGACATTTTCATGTTACTCTTGTGAACAAAACTTTAGCGATCGCAGAAGTACTCTTTTCCATATTCGTCAGCACATGCCCGATCTAAGACCGCACACGTGTATCGCATGCTTGACGGAGTTTCCGGATCGATCAATGTATAAACTACATTGTAGAGCATCATTCGAATGTGCAATGAAGATCGCTCTCGTTATACCGGAACAAGGCTTTGAGAAATGCTTCACGTGTAATATGTGTTTACGTACTATGCAGGACAGAAAGCAATTGCTTAGTCATCTATCGAAACATTCAGATAAACAGTACGAGGAACTGGTATCTCCAACACGATCTCCTCCTAAATTAAAACCAGTAACTCCTCTCCCATCTTTGAGACAGGAGTCACCGAAAAAATCGTTGAAAGAAAATACTCAGAACATACCCAAACCTTACAAAAATGGCGATCCTGCGCATAATCATGTATGCGATCTGTGTGGTATGATTTACAGGTACAGGCCAAACATGTTGAAGCATAGAGACCTATGTCAACGTTTATCATCCGACGTCAGAACATCCTATAGGTGTGTTCATTGTGGTATGACATATTTGGTGTTCAAAAAATTTCATTCTCATATAATGACGGACCACAAAAAGAATGATTTCATATGTTCTGAATGTGGCAGTAAATCCAAATCTCCTAATGATTATTTGGAGCATCACAAAGAGCACTCTAATAATCCTAACAAGGAAGGAACTTCTGAATCAAAAAGCGATTTAATAAAGACTACTACGCAGAACATTTCAAAATCCATCAAGGATTGGGATACGTTTGAAGCTGAAGTGAATGCTGGTAAGCTGTCAGATAGTAATCAATATAGCTGTGCTCTCTGTAATTTGGAATTCACTACTAGAGCTGAACTAATGGAACACAGGAATCTTCATCTGAAAGTGAAGATTTATTCTTGCGTCATCTGTCGTAGCATGTTCAGCAGCGCAGGTGCTTTGGAAATTCATATGAAAGATCATGGTATAGAAGATCCAAGTGAGAGAAATGCAAACATCTCCTGCGTGGAGTATGGTACGGTAGAAGATTCACAGGATTCAAATTCAGTAAATGTAAGCGCCACCTCGGATCCTGGTAATAAAAAGAACGAGTGCGATACGTGCGGCAAGATATTCTCGAATAATGCTAATCTTAAGAGGCATATCAGAAATATTCACAATGTTACCAAAAGCAAGCTCAACTGCTCCTACTGTCGGCGAATGTTTAAAAGTAAAGAGGCACATGATCAACACGTAGCAATTGATCACCCAAAGAATGCGAAGCCGACGTATCAGTGCACTAAATGTCGAAAGACTTTCTTCTTCCAAGCTAATCTAAATTTTCACTTCGAAACTGCCCATGGTGAGGAATCAGCTGGTCACGAATGCGACATTTGCGGTAAGTCTTTCTTGGAAGAATCATCTCTAAAAATACACAGGAGCTGGCACAATCGAGCAAACTCCAGATTGAGTTTACGATTTATGAGAAAAGAAGTTCAAAAGCCATTGAACCAGATTAAACAACAGGAATCTTACAATTCCAGTATGACCCGACCAGCTAGAGCACGAAAATCTTATCCAAATTTACCTCCAGCAAAGCCGAATGGTAATTTCCAATGCCAAGTTTGCAGTGATAAGTTCAATGATGTAACAGAATTGAGGACACACTTATGGGATGTGCACTGTGCTCGCAATAAAGCTGAGAAGAGCTTTTCAGGCGACGAGTTCCAATGTGAGATTTGCACAAATGTTTTCCCTGACAAGGAGACATTAGACATGCATATACAATGGCACAAAGCTCAACCCATTCTTGATGATATAAAGAAATCTGATTACACTTGTGACATTTGTGGGAAACTATACAGCTCTAAGAAAATATTATCGAGACATAAGAAGCTTCACAAATCCACAGTCATAGCTGCTGCAAAGCTACAATCAGCTGGCAAGAACTTAGCAAGTAGTCCACTTTTATGCACCCTTTGTCACAAGGTGTTCAATAGTATTCGGTCGCTTCAGCGTCACAAAATCAACCTACATGCTAACGTAGTTAATCAACAACCCCAGCATATGTACAACGACGCGAGAAGTCTATCTGAAGAAGAGCCAAAAGCTAAGAAAATAAAATTAGAAGAAGAGGACAAGAAAGTACCTCTTCCCATGGATGCCATGAGCGCGGGCAGGAAGTCAGTTATGTGCCACGTCTGTAGGAAGTTCTTCGCAAACATGAGTGTGTTGTACAAGCACAAAAAATTGGTGCACGCTAAGACTCACACGAATCTGATACAGAATCTGGCCAAGTCATATAATGTCGAATGTGTACCATTACCCAGCAATGATGGTAAAGTCCTTTGCAATATTTGCTACAAGAAGTTTTCTGCTGTGTCGAATCTGCGCCAGCATTTTACTATAAAACATAAAAATGCTCCGATCAAGTACGCTTGTCCTGTAGACGGCTGCAAGCTCACGTTCCCAACGCAGATGGTTTTAAGGAACCATGAATTATCGCACACCAGCATTATCTACAGTTGCACCTTATGCGATAGACACGTGTTCAGCAAGACTGCAATGTCAGATCACATGCTGACGATACACAACACTGTTTACAACGCTGAGAATAGCAAGAATTTCCACAGAGAGATGGATTTGACCAAATATGTGGTGGAGGGTGCAGTAGACGCGACTTGTCCTCAATGCAAGATCAAGTATCCCAACAATAGGGCCATGAAGATTCACTACTTCAAGTTCCACGAGGGTACGAATTAG
Protein Sequence: MDEVVELQNMENACRLCLSTDEPKFSVFETEDSPVSMASKIQACLSIQILITDRLSTKICEQCIKNINVWHNYKETCLRSQEKLNRWLEQYLQQNPMIVTIKDEPVDLEFCEDNIEIISESSNDLNLEAANLEENINPLENNHQDQELSDNEIVLNRDQPALTKDIICIKSELQDDYDTDCTIEIESITGSELVLNPLSSSEDRVMEADSTQKSNASASASKKKIRRGPHTHFRGARVFKQKCVHCQINLHSKYSYAKHMERFHSDKQNGSVNQSELEDEEELIEDLEDELMSMEKDAPLTQVQQNIISQLKTFSCYSCEQNFSDRRSTLFHIRQHMPDLRPHTCIACLTEFPDRSMYKLHCRASFECAMKIALVIPEQGFEKCFTCNMCLRTMQDRKQLLSHLSKHSDKQYEELVSPTRSPPKLKPVTPLPSLRQESPKKSLKENTQNIPKPYKNGDPAHNHVCDLCGMIYRYRPNMLKHRDLCQRLSSDVRTSYRCVHCGMTYLVFKKFHSHIMTDHKKNDFICSECGSKSKSPNDYLEHHKEHSNNPNKEGTSESKSDLIKTTTQNISKSIKDWDTFEAEVNAGKLSDSNQYSCALCNLEFTTRAELMEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPSERNANISCVEYGTVEDSQDSNSVNVSATSDPGNKKNECDTCGKIFSNNANLKRHIRNIHNVTKSKLNCSYCRRMFKSKEAHDQHVAIDHPKNAKPTYQCTKCRKTFFFQANLNFHFETAHGEESAGHECDICGKSFLEESSLKIHRSWHNRANSRLSLRFMRKEVQKPLNQIKQQESYNSSMTRPARARKSYPNLPPAKPNGNFQCQVCSDKFNDVTELRTHLWDVHCARNKAEKSFSGDEFQCEICTNVFPDKETLDMHIQWHKAQPILDDIKKSDYTCDICGKLYSSKKILSRHKKLHKSTVIAAAKLQSAGKNLASSPLLCTLCHKVFNSIRSLQRHKINLHANVVNQQPQHMYNDARSLSEEEPKAKKIKLEEEDKKVPLPMDAMSAGRKSVMCHVCRKFFANMSVLYKHKKLVHAKTHTNLIQNLAKSYNVECVPLPSNDGKVLCNICYKKFSAVSNLRQHFTIKHKNAPIKYACPVDGCKLTFPTQMVLRNHELSHTSIIYSCTLCDRHVFSKTAMSDHMLTIHNTVYNAENSKNFHREMDLTKYVVEGAVDATCPQCKIKYPNNRAMKIHYFKFHEGTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00226094;
90% Identity: iTF_00230165; iTF_00230212;
80% Identity: -