Basic Information

Insect: Bombus superbus
Gene Symbol: -
Assembly: GCA_014737385.1
Location: JACXIK010000005.1:940310-948666[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.1 3.9e+03 -2.3 5.5 6 43 232 264 230 265 0.70

2 17 2.5 4.6e+03 -2.5 1.8 16 39 384 404 381 408 0.68

3 17 0.49 8.9e+02 -0.3 0.4 18 29 464 475 459 488 0.83

4 17 0.59 1.1e+03 -0.5 3.0 14 26 493 505 477 520 0.76

5 17 7.2 1.3e+04 -4.0 0.0 14 26 592 604 589 607 0.73

6 17 4 7.3e+03 -3.2 0.1 15 28 621 634 615 637 0.76

7 17 6.5e-07 0.0012 18.5 0.5 14 44 685 712 680 712 0.92

8 17 0.28 5.1e+02 0.5 0.1 17 29 718 730 713 742 0.77

9 17 1.5 2.8e+03 -1.8 0.4 18 26 750 758 746 773 0.81

10 17 0.14 2.6e+02 1.4 0.2 18 27 780 789 766 797 0.81

11 17 0.0099 18 5.2 0.0 13 43 852 879 842 880 0.83

12 17 3.6 6.5e+03 -3.0 0.0 18 26 895 903 894 908 0.82

13 17 0.0081 15 5.4 0.3 13 35 926 945 917 953 0.78

14 17 0.22 4e+02 0.9 0.2 19 28 976 985 972 993 0.82

15 17 1.5 2.8e+03 -1.8 0.4 15 28 1046 1059 1042 1078 0.84

16 17 6.8e-06 0.012 15.3 0.3 11 44 1094 1124 1090 1124 0.90

17 17 7.7 1.4e+04 -4.1 0.9 18 43 1160 1182 1151 1183 0.67

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.1	3.9e+03	-2.3	5.5	6	43	232	264	230	265	0.70
2	17	2.5	4.6e+03	-2.5	1.8	16	39	384	404	381	408	0.68
3	17	0.49	8.9e+02	-0.3	0.4	18	29	464	475	459	488	0.83
4	17	0.59	1.1e+03	-0.5	3.0	14	26	493	505	477	520	0.76
5	17	7.2	1.3e+04	-4.0	0.0	14	26	592	604	589	607	0.73
6	17	4	7.3e+03	-3.2	0.1	15	28	621	634	615	637	0.76
7	17	6.5e-07	0.0012	18.5	0.5	14	44	685	712	680	712	0.92
8	17	0.28	5.1e+02	0.5	0.1	17	29	718	730	713	742	0.77
9	17	1.5	2.8e+03	-1.8	0.4	18	26	750	758	746	773	0.81
10	17	0.14	2.6e+02	1.4	0.2	18	27	780	789	766	797	0.81
11	17	0.0099	18	5.2	0.0	13	43	852	879	842	880	0.83
12	17	3.6	6.5e+03	-3.0	0.0	18	26	895	903	894	908	0.82
13	17	0.0081	15	5.4	0.3	13	35	926	945	917	953	0.78
14	17	0.22	4e+02	0.9	0.2	19	28	976	985	972	993	0.82
15	17	1.5	2.8e+03	-1.8	0.4	15	28	1046	1059	1042	1078	0.84
16	17	6.8e-06	0.012	15.3	0.3	11	44	1094	1124	1090	1124	0.90
17	17	7.7	1.4e+04	-4.1	0.9	18	43	1160	1182	1151	1183	0.67

Sequence Information

Coding Sequence: ATGGACGAGGTGGTGGAGTTGCAGAATATGGAAAACGCGTGTAGGCTCTGCCTGTCCACCGATGAGCCAAAATTTTCGGTGTTCGAAACGGAAGACTCTCCGGTGTCCATGGCCAGCAAGATACAAGCTTGTCTATCGATTCAGATTTTAATAACCGATAAATTATCAACCAAAATATGTGAGCAATGTATTAAAAATATAAATGTATGGCATAATTACAAGGAAACATGTTTGCGTTCACAAGAAAAGTTGAATCTGTGGTTGGAACAATACCTGCAACAGAATCCAATGGTTGTAACTATTAAGGATGAACCTGTTGATTTGGAATTTTGCGAAGACAATATCGAGATTATTTCAGAATCTAGCAATGATTTGAACTTGGAAGCTGCTAATCTCGAAGGAAATATAAATCCTGTAGAAAATAATCATCAAGATCAGGAATTACCTGACAATGAAATAGCTTTAAACAGAGATCAACCAGCTTTAACAAAAGACATCATTTGTATAAAATCTGAACTACAAGATGATTATGACACAGATTGTACTATAGAAATTGAATCTATTACTGGCAGTGAATTTGTTTTGAATCCCCTTTCAAGCTCAGAGGATAGGGTTATGGAAGCTGATTCCACTCAGAAATCTAATGCATCTGCATCAGCAAGCAAGAAGAAAATCAGAAGAGGTCCACACACCCATTTTAGGGGTGCACGTGTTTTTAAACAGAAATGTGTACATTGCCAAATTAATTTGCATTCTAAGTATTCTTATACAAAGCATATGGAAAGATTTCATAGTGACAAACAGAATGGTAGTGTTAATCAATCGGAATTGGAAGATGAGGAAGAGCTTGTTGAAGATTTGGAGGATGAATTAATGAGCATGGAAAAGGATGCTCCATTGACACAAGTGCAGCAAAATATTATAAGTCAATTGAAGACATTTTCATGTTACTCTTGTGAACAAAGCTTTAGCGATCGCAGAAGTACTCTTTTCCATATTCGTCAGCACATGCCCGATCTAAGACCGCACACGTGTATCGCGTGCTTGACGGAGTTTCCGGATCGATCAATGTATAAACTACATTGTAGAGCATCATTTGAATGTGCAATGAAGATCGCTCTCGTTATACCGAAACAAGGCTTGGAGAAATGCTTCACGTGTAATATGTGTTTACGTACTATGCAGGACAGAAAGCAATTGCTTAGTCATCTATCGAAACATTCAGATAAACAGTACGAGGAACTGGTATCTCCAACACGATCTCCTCCTAAATTAAAACCAGTAACTCCTCTCCCATCTTTGAGACAGGAGTCACCGAAAAAATCGTTGAAAGAAAATACTCAGAACATACCCAAACCTTACAAAAATGGCGATCCTGCGCACAATCATGTATGCGACCTGTGTGGTATGATTTACAGGTACAAGCCAAACATGTTGAAGCATAGAGACCTATGTCAACGTTTATCATCCGACGTCAGAACATCCTATAGGTGTGTTCATTGTGGTATGACATATTTGGTGTTCAAAAAATTTCATTCTCATATAATGACGGACCACAAAAAGAATGATTTCATATGTTCTGAATGTGGCAGCAAATTCAAATCTCCTAATGATTATTTGGAGCATCACAAAGAGCACTCTAATAATCCTAACAAGGAAGGAACTTCTGAATCGAAAAGCGATTTAATAAAGACTACTACGCAGAACATTTCAAAATCCATCAAGGATTGGGATACGTTTGAAGCTGAAGTGAATGCTGGTAAGCTGTCAGATAGTAATCAATATAGCTGTGCTCTCTGTAATTTGGAATTCACTACTAGAGCTGAACTAATGGAACACAGGAATCTTCATCTGAAAGTGAAGATTTATTCTTGCGTCATCTGTCGTAGCATGTTCAGCAGCGCAGGTGCTTTGGAAATTCACATGAAAGATCATGGTATAGAAGATCCAAGTGAGAGAAATGCAAACATCTCCTGCATGGAGTATGGTACAGTAGAAGAAGATTCACAGGATTCAAATTCAGTAAATGTAAGCGCCACCTCGGATCCTGGTAATAAAAAGAACGAGTGCGACACGTGCGGCAAGATATTCTCGAATACCGCTAATCTTAAGAGGCATATCAGAAATATTCACAATGTTACCAGAGGCGAGCTCAACTGCTCCTACTGTCGGCGAATGTTTAAAAGTAAAGAGGCACATGACCGACACGTAGCAACTGATCACCCAAAGAATGCGAAGCCGACGTATCAGTGCACTAAATGTCGAAAGACTTTCTTCTTCCAAGCTAATCTAAATTTTCACTTCGAAACTGCCCATGGTGAGGAATCAGCTGGTCACGAATGCGACATTTGCGGTAAGACTTTCATGGAAGAATCATCTCTAAAAATACACAGGAGCTGGCACAATCGAGCAAACTCCAGATTGAGTTTACGATTTATGAGAAAAGAAGTTCAAAAGCCATTGAACCAGATTAAACAACACGAATCTTACAATTCCAGTATGACCAGACCAGCTAGAGCACGAAAATCTTACCCAAATTTACCTCCAGCAAAGCCGAATGGTAATTTCCAATGCCAAGTTTGCAGTGACAAGTTCAATGATGTAACAGAATTGAGGACACACTTATGGGATGTGCACTGTGCTCGCAATAAAGCTGAGAAGAGCTTTTCAGGCGACGAGTTCCAATGTGAGATTTGCACAAATGTTTTCCCTGACAAGGAGACATTAGACATGCATATACAATGGCACAAAGCTCAACCCATTCTTGATGATATAAAGAAATCTGATTACACTTGTGACATTTGTGGGAAACTATACAGCTCTAAGAAAATATTATCGAGACACAAGAAGCTTCACAAATCCACAGTCATAGCTGCTGCAAAGCTACAATCAGCTGGCAAGAACTTAGCAAGTAGTCCACTTTTATGCACCCTCTGTCACAAGGTGTTCAATAGTATTCGGTCGCTTCAGCGTCACAAGATCAACCTACATGCTAACATAGTTAATCAACAATCCCAGCATATATACAACGACACGAGAAGTCTATCTCAAGAAGAGCCAAAAGCTAAGAAAATAAAATTAGAAGAAGAGGACAAGAAAGTACCTCTTCCCATGGATGCCATGAACGTGGGCAAGAAGTCAGTTATGTGCCACGTCTGTAGGAAGTTCTTCGCGAACATGAGTGTGTTGTACAAGCACAAAAAATTGGTGCACGCTAAGACTCACACGAATCTGATACAGAATCTGGCCAAGTCATATAATGTCGAATGTGTACCATTACCTAGCAATGATGGTAAAGTCCTTTGCAATGTTTGCTACAAAAAGTTTTCTGCTGTGTCGAATTTGCGCCAGCATTTTACTATAAAACATAAAAATGCTCCGCTCAAGTACGCTTGTCCTGTAGATGGCTGCAAGCTCACGTTCCCAACGCAGATGGTTTTAAGGAACCATGAATTGTCGCACACCAGCATTATCTACAGTTGCACCTTATGCGATAGACACGTGTTCAGCAAGACTGCAATGTCAGATCACATGCTGACGATACACAACACTGTTTACAATGCTGAGAATAGCAAGAATTTCCACAGAGAGATGGATTTGACCAAATATGTGGTGGAGGGTGCAGTAGACGCGACTTGTCCTCAATGCAAGATCAAGTATCCCAACAATAGGGCCATGAAGATTCACTACTTCAAGTTCCACGAGGGTACGAACCAGTAG
Protein Sequence: MDEVVELQNMENACRLCLSTDEPKFSVFETEDSPVSMASKIQACLSIQILITDKLSTKICEQCIKNINVWHNYKETCLRSQEKLNLWLEQYLQQNPMVVTIKDEPVDLEFCEDNIEIISESSNDLNLEAANLEGNINPVENNHQDQELPDNEIALNRDQPALTKDIICIKSELQDDYDTDCTIEIESITGSEFVLNPLSSSEDRVMEADSTQKSNASASASKKKIRRGPHTHFRGARVFKQKCVHCQINLHSKYSYTKHMERFHSDKQNGSVNQSELEDEEELVEDLEDELMSMEKDAPLTQVQQNIISQLKTFSCYSCEQSFSDRRSTLFHIRQHMPDLRPHTCIACLTEFPDRSMYKLHCRASFECAMKIALVIPKQGLEKCFTCNMCLRTMQDRKQLLSHLSKHSDKQYEELVSPTRSPPKLKPVTPLPSLRQESPKKSLKENTQNIPKPYKNGDPAHNHVCDLCGMIYRYKPNMLKHRDLCQRLSSDVRTSYRCVHCGMTYLVFKKFHSHIMTDHKKNDFICSECGSKFKSPNDYLEHHKEHSNNPNKEGTSESKSDLIKTTTQNISKSIKDWDTFEAEVNAGKLSDSNQYSCALCNLEFTTRAELMEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPSERNANISCMEYGTVEEDSQDSNSVNVSATSDPGNKKNECDTCGKIFSNTANLKRHIRNIHNVTRGELNCSYCRRMFKSKEAHDRHVATDHPKNAKPTYQCTKCRKTFFFQANLNFHFETAHGEESAGHECDICGKTFMEESSLKIHRSWHNRANSRLSLRFMRKEVQKPLNQIKQHESYNSSMTRPARARKSYPNLPPAKPNGNFQCQVCSDKFNDVTELRTHLWDVHCARNKAEKSFSGDEFQCEICTNVFPDKETLDMHIQWHKAQPILDDIKKSDYTCDICGKLYSSKKILSRHKKLHKSTVIAAAKLQSAGKNLASSPLLCTLCHKVFNSIRSLQRHKINLHANIVNQQSQHIYNDTRSLSQEEPKAKKIKLEEEDKKVPLPMDAMNVGKKSVMCHVCRKFFANMSVLYKHKKLVHAKTHTNLIQNLAKSYNVECVPLPSNDGKVLCNVCYKKFSAVSNLRQHFTIKHKNAPLKYACPVDGCKLTFPTQMVLRNHELSHTSIIYSCTLCDRHVFSKTAMSDHMLTIHNTVYNAENSKNFHREMDLTKYVVEGAVDATCPQCKIKYPNNRAMKIHYFKFHEGTNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00226094;
90% Identity: iTF_00233421;
80% Identity: iTF_00230212;