Bvos002960.1
Basic Information
- Insect
- Bombus vosnesenskii
- Gene Symbol
- Rel
- Assembly
- GCA_011952255.1
- Location
- NW:166975-172023[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-40 1.3e-36 125.3 0.4 1 168 76 266 76 267 0.92 2 2 1.8 4.7e+03 -3.4 0.1 77 111 467 501 464 513 0.74
Sequence Information
- Coding Sequence
- ATGCCTGAAGTTTACGAGAATTACGCAGTTCCAGTTTCCGAAAATCtggatttttattcttatgaATGTGATTTACAAGCAATGAACAATCAAGGTGTTTATAGTCCACTTAGTGGATCTCAAGCGACAGTGAGCGTCAATTCACCTATGTCTACTACATTGTCACCATTACAGGGCaatgaatttttaacattaaatgATACGACaaTTATTGGAGAGCCATCTATAACAATCTTGGAACAACctatagaaaaatttagaTTTCGATACAAATCAGAAATGGTGGGAACACATGGAAGTTTAGCAGGATCAAATAGTGCTATTAATCGTCACAAGAATGCACCAACAGTACAATTAAATAATTTCCTGGAGTCTGCAATAATACGGTGTACACTTGTTACATCTGACGAAGGCAGTCACAGAATTCCTCATGCTCATAGATTAATTCGTAGAGATGGTGGTCATGATTATGATGATCCACATCATATCACAGTATCTTCTGAAGTTGGATATACTGCAAtATTCCATGGAATGGCAATTATACACACAGGAAAAAGGCATATTAGAGATGAACTTATAAAAAAGATGCAAGCCGAAGCtttagagaaaaagaaacttgAAAATATGAAGGCAATTCTTACTACTAGAGAGGAAGCAcaaATTAAAGTTGATGctgaaaattatcaaaaatgtATGAATTTGAATAGTGTTGCACTGTGCTTTCAAGCATTCATCTTAGATGATCATGGAATTATGAGGCCAATAACAGAACCTGTATATTCACATGCTATTAATAATCTTAAGAGTGCATTAACTGGAGAACTTAAAATATGCAGAATTGATAAACACACTAGTAGTGTTGAGGGAGCAGAAGAAGTATTCATACTGGTAGAAAAAGTAggaaaaaaaaatattaaaataaaattttttgaattaaATGAGGATGATTGTGAAATTTGGAGTGCATATGGACGTTTTTCAGAATTGGATGTACATCATCAATATGCTATTGTATTTCGaaCACCACCATATAAAGATCAAAATATCACAACGACAAAAGAAGTTTTCATACAGTTAGAACGGCCGTCTGATGGAGGTTGTTCTGAAccaaaaaaattttattacaaaccAAGTGATAGGATTATagGTAGGAAACGTCAACGAATATCTCATTCTGGAAGTTCGGAATTTTCACATATACTATCAAGTCCCAATTGTATtggaaatgaaaatacatCAGAACTCTTAAGTAATAGCAGTCGAGaattatctaaagaaataataaaattattatctgaAGGTCCTCCAACACCAGTGTGCAAAGATTTTCTGAAAGATATGGATGTTGACAattatttaaaattgctCGTTAATGGTGAAGAAAATATGTTAACCACTGATGGCGTATCAACTGtacaatGCCAGGATGATGTAATGTTCGctaaaaatatacttattgAAATTATGCATTGTATGAAAATggatgtaaaaaatgtaaaagaacATGTCCAAAAGCTATTCAGAGACCGATCAACATATGGGGATTCGCCGTTACACGCAGCACTTCGATACGGACAACGTGATGTTATCAAATACCTGTTAATGTTATTATGTACTAATAAGGACTGTAAAACGCTGGTTAATAGCCAAAATAGTTCTGGAAAaaCCCCATTGCATTATGCTGTTTTGCAAAACCAACCTGAAACTGCAAAAGCATTACTTATGCTTGGAGCTGATCCAAATCGAACAGATGAGCATGGATTCTCCCCACTACATGCAGCAGTAAAAATCCCCGATGCTGGGTTGTGTGTTGATGTATTACTAGTCGAAAAAGGAATAGACATTGAAGCACACAATGATGCTGGATGGACGCCATTACATCTTGCAGCTGAAGCAGGATCATACGATGCAGTACGTTCACTTATTCGTGCTGGAgcaaatgtaaataatactGATATGTCTTATGGTCGAACAGCATTACATATAGCTGTTGAAGGTGgacataaaaatgtagttgAATATTTACTCAAAAAGACAAATATACTTGtgaataaaagaaactttagTGGAAATACTGCTTTGCATACTGCAGTTGTACATACAGGAACACGAGCAAAAGAACTGTGTGCATTACTAATACAACATGGTGCAGATCCGCATATTCAAAATCATAATCGGAAGTCAGATGATGTGGACGAAAAAAACGAATCACATATTAATGTGAAAGTCGAAGTAGATTCAGAAGACGAAAATATAGAAGGAACTATTGGGCAGTCATCATTTGATTTAGCTACGAATAAACCAGacattTTACAGCTTTTTAATGATCAACCTAAGGAAACCACAAGTGAAATGTGCTCAGTTGCTACAAAGTTAGaattaaaagatgaaaatttacaaacaaGTTGGTTAAATGATGaacataaaaaagaattgtCTACCCTTTTAGACAAAACACAAGGATGGCAAAAACTTGCTAAACATTTAGGTGTTGAATACTTATTACAACCATTTCAATATGGTTCAACAAGTCCATCATTGATTCTCTTAAATTACATTGACGTAGAGGCATCCCTATCTCTCACAGATATACAAACAGTGTTAAGAGAAATTGAAGAGGAAGAAGCAGCAGATTACATAAATGGAATTTCATCTACATGTTCATAA
- Protein Sequence
- MPEVYENYAVPVSENLDFYSYECDLQAMNNQGVYSPLSGSQATVSVNSPMSTTLSPLQGNEFLTLNDTTIIGEPSITILEQPIEKFRFRYKSEMVGTHGSLAGSNSAINRHKNAPTVQLNNFLESAIIRCTLVTSDEGSHRIPHAHRLIRRDGGHDYDDPHHITVSSEVGYTAIFHGMAIIHTGKRHIRDELIKKMQAEALEKKKLENMKAILTTREEAQIKVDAENYQKCMNLNSVALCFQAFILDDHGIMRPITEPVYSHAINNLKSALTGELKICRIDKHTSSVEGAEEVFILVEKVGKKNIKIKFFELNEDDCEIWSAYGRFSELDVHHQYAIVFRTPPYKDQNITTTKEVFIQLERPSDGGCSEPKKFYYKPSDRIIGRKRQRISHSGSSEFSHILSSPNCIGNENTSELLSNSSRELSKEIIKLLSEGPPTPVCKDFLKDMDVDNYLKLLVNGEENMLTTDGVSTVQCQDDVMFAKNILIEIMHCMKMDVKNVKEHVQKLFRDRSTYGDSPLHAALRYGQRDVIKYLLMLLCTNKDCKTLVNSQNSSGKTPLHYAVLQNQPETAKALLMLGADPNRTDEHGFSPLHAAVKIPDAGLCVDVLLVEKGIDIEAHNDAGWTPLHLAAEAGSYDAVRSLIRAGANVNNTDMSYGRTALHIAVEGGHKNVVEYLLKKTNILVNKRNFSGNTALHTAVVHTGTRAKELCALLIQHGADPHIQNHNRKSDDVDEKNESHINVKVEVDSEDENIEGTIGQSSFDLATNKPDILQLFNDQPKETTSEMCSVATKLELKDENLQTSWLNDEHKKELSTLLDKTQGWQKLAKHLGVEYLLQPFQYGSTSPSLILLNYIDVEASLSLTDIQTVLREIEEEEAADYINGISSTCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00220357;
- 90% Identity
- iTF_00228444;
- 80% Identity
- -