Bhor018352.1
Basic Information
- Insect
- Bombus hortorum
- Gene Symbol
- Rel
- Assembly
- GCA_905332935.1
- Location
- HG995198.1:9570189-9574873[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-39 7.5e-36 123.9 0.5 1 168 76 266 76 267 0.91
Sequence Information
- Coding Sequence
- ATGCCTGAAGTTTACGAGAATTACGCAGTTCCAGTTACTGAAAATCTGGACTTTTATTCTTATGAATGTGATTTACAAGCAATGAACAATCAAGGTGTTTATAGTCCACTTAGTGGATCTCAAGCGACAGCGAGTGTCAATTCACCTATGTCTACTACATTGTCACCATTACAGGGCAATGAATTTTTAACATTAAATGATACAACAGTTATTGGAGAGCCATCTATAACAATCTTGGAGCAACCTATAGAAAAATTTAGATTTCGATACAAATCAGAAATGGTAGGAACACATGGAAGTTTAGTGGGATCAAATAGTGCTATTAGTCGTCACAAGAACGCACCAACAGTACAATTAAATAATTTCCTGGAGTCTGCAATAATACGGTGTACACTTGTTACATCTGACGAAGGAAGTCACAGAATTCCTCATGCTCATAGATTAATTCGTAGAGATGGTGGTCACGATTATGATGATCCACATCATATCACAGTATCTTCTGAAATTGGATATACTGCAGTATTCCATGGAATGGCAATTATACACACAGGAAAAAGGCATATTAGAGATGAACTTATAAAAAAGATGCAAGCTGAAGCTTTAGAGAAAAAGAAACTTGAAAATATGAAGGCAATTCTTAGTACTAGAGAGGAAGCACAAATTAAAGTTGATGCTGAAAATTATCAAAAATGTATGAATTTGAATAGTGTTGCACTGTGCTTTCAAGCGTTTATCTTAGATGATCATGGAATTATGAGGCCAATAACAGAACCTGTATATTCACATGCTATTAATAATCTTAAGAGTGCATTAACTGGAGAGCTTAAAATATGCAGAATTGATAAACACACTAGTAGTGTTGAGGGAGCAGAAGAAGTATTCATACTGGTAGAAAAAGTAGGAAAAAAAAATATTAAAATAAAATTTTTTGAATTAAATGAGGATGATTGTGAAATTTGGAGTGCATATGGACGAACAGGCTACCTCAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAACACCACCATATAAAGATCAAAATATCACAACGACAAAAGAAGTTTTCATACAGTTAGAACGGCCGTCTGATGGAGGTTGTTCTGAACCAAAAAAATTTTATTACAAACCAAGTGATAGAATTATAGGTAGGAAACGTCAACGAATATCTCATTCTGGAAGTTCAGAGTTATCACATATACTATCAAGTCCCAATTGTATTGGAAATGAAAATACATCAGAACTTTTAAGTAATAGCAGTCGAGAATTATCTAAAGAAATAATAAAATTATTATCTGAAGGTCCTCCAACACCAGTGTGCAAAGATTTTCTGAAAGATATGGATGTTGACAATTATTTAAAACTCCTTGTTAATGGTGAAGAGAATATGTTAACCACTGATGGCCTATCAACTGTACAACGCCAGGATGATGTAATGTTCGCTAAAAATATACTTATTGAAATTATGCAATGTATGAAAAGGGATGTAAAAAATGTGAAAGAACATGTCCAAAAGCTACTCAGAGACCGATCAACATATGGGGATTCTCCGTTACATGCAGCACTTCGATATGGACAACGTGATATTATCAAATACCTGTTAATGTTATTATGTACTAATAAGGATTGTAAGACGCTGGTTAATAGCCAAAATAGTTCTGGAAAAACCCCGTTGCATTATGCTGTTTTGCAAAACCAACCCGAAACTGCAAAAGCACTACTTATGCTTGGAGCTGATCCAAATCGAACAGATGAGCATGGATTCTCTCCATTACATGCAGCAGTAAAAATCCCCGATGCTGGGTTGTGTGTTGATGTATTACTAGTTGAAAAAGGAATAGACATTGAAGCACATAATGATGCTGGATGGACGCCATTACATCTTGCAGCTGAAGCAGGATCATACGATGCAGTATGTTCACTTATTCGTGCCGGAGCAAATGTAAATAATACTGATATGTCTTATGGTCGAACAGCATTACATATAGCTGTTGAAGGTGGACATAAAAATGTAGTTGAATATTTACTCAAAAAGACAAATATACTTGTGAATAAAAGAAACTTCAGTGGAAATACTGCTTTGCATACTGCAGTTGTACATACAGGAACACGAGCAAAAGAATTGTGTGCATTACTAATAAAACATGGTGCAGATCCGCATATTCAAAATCATGATCGGAAGTCAGATGATGTGGACGAAAAGAACGAATCACATATTAATGTGAAAGTCGAAGTAGATTCAGAAGACGAAAATATAGAAGAAACTATTGGGCAGTCATCATTTGATTTAGCTATGAATAAACCAGACATTTTACAGCTTTTTAATGATCAACCTGGAGAAACCACAAGCGAAATGTGTTCAGTTGCTACAAAGTTAGAATTAAAAGATGAAAATTTGCAAACAAGTTGGTTAAATGATGAACACAAAAAAGAATTATCTACCCTTTTAGACAAAACACAAGGATGGCAAAAACTTGCTAAACATTTAGGTGTTGAATACTTATTAGAACCATTTCAATATAGTTCAACAAGTCCATCATTGATTCTTTTAAATTACATTGACGTAGAGGCATCCCTATCGCTCACAGATATACAAACAGTGTTAAGAGAAATTGAAGAGGAAGAAGCAGCAGATTACATAAATGGAATTTCATCTACATGTTCATAA
- Protein Sequence
- MPEVYENYAVPVTENLDFYSYECDLQAMNNQGVYSPLSGSQATASVNSPMSTTLSPLQGNEFLTLNDTTVIGEPSITILEQPIEKFRFRYKSEMVGTHGSLVGSNSAISRHKNAPTVQLNNFLESAIIRCTLVTSDEGSHRIPHAHRLIRRDGGHDYDDPHHITVSSEIGYTAVFHGMAIIHTGKRHIRDELIKKMQAEALEKKKLENMKAILSTREEAQIKVDAENYQKCMNLNSVALCFQAFILDDHGIMRPITEPVYSHAINNLKSALTGELKICRIDKHTSSVEGAEEVFILVEKVGKKNIKIKFFELNEDDCEIWSAYGRTGYLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPYKDQNITTTKEVFIQLERPSDGGCSEPKKFYYKPSDRIIGRKRQRISHSGSSELSHILSSPNCIGNENTSELLSNSSRELSKEIIKLLSEGPPTPVCKDFLKDMDVDNYLKLLVNGEENMLTTDGLSTVQRQDDVMFAKNILIEIMQCMKRDVKNVKEHVQKLLRDRSTYGDSPLHAALRYGQRDIIKYLLMLLCTNKDCKTLVNSQNSSGKTPLHYAVLQNQPETAKALLMLGADPNRTDEHGFSPLHAAVKIPDAGLCVDVLLVEKGIDIEAHNDAGWTPLHLAAEAGSYDAVCSLIRAGANVNNTDMSYGRTALHIAVEGGHKNVVEYLLKKTNILVNKRNFSGNTALHTAVVHTGTRAKELCALLIKHGADPHIQNHDRKSDDVDEKNESHINVKVEVDSEDENIEETIGQSSFDLAMNKPDILQLFNDQPGETTSEMCSVATKLELKDENLQTSWLNDEHKKELSTLLDKTQGWQKLAKHLGVEYLLEPFQYSSTSPSLILLNYIDVEASLSLTDIQTVLREIEEEEAADYINGISSTCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00226371; iTF_00222315; iTF_00227053; iTF_00229133; iTF_00218193; iTF_00214802; iTF_00227734; iTF_00230486; iTF_00219577; iTF_00225017; iTF_00215483; iTF_00217532; iTF_00228444; iTF_00223652; iTF_00214184; iTF_00232395; iTF_00231772; iTF_00218888; iTF_00221035; iTF_00221710; iTF_00216165; iTF_00224335; iTF_00222969; iTF_00233009; iTF_00229805; iTF_00216850; iTF_00231093; iTF_00225688;
- 90% Identity
- iTF_00228444;
- 80% Identity
- -