Bter003635.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombus terrestris
Gene Symbol
HIVEP2
Assembly
GCA_000214255.1
Location
NC:739487-811221[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 7.5e-05 0.0046 16.5 0.5 1 23 116 138 116 138 0.98
2 8 0.01 0.63 9.8 2.1 1 21 144 164 144 168 0.86
3 8 0.042 2.6 7.9 0.1 1 21 366 386 366 387 0.94
4 8 7.5e-07 4.6e-05 22.8 1.6 1 23 917 939 917 939 0.99
5 8 8.4e-06 0.00051 19.5 4.3 1 23 945 969 945 969 0.92
6 8 1e-06 6.3e-05 22.4 0.1 2 23 1378 1399 1377 1399 0.97
7 8 0.00041 0.025 14.2 1.8 1 23 1405 1429 1405 1429 0.92
8 8 0.0007 0.043 13.5 3.3 1 23 1450 1474 1450 1474 0.93

Sequence Information

Coding Sequence
ATGACGACAGAGACTCACACTGTGGCGATGACAGACCCACAGTTAGcaaacaacaacaacaataacaacaccagtaacaacaacaacaacaacaacaataacaacaataacaataacgatGGCGAGCCGAAATACTTGCACAAGAAGTTCAAGAAGATGGCGACGACCGAGGTTACGCCGCAAGTGGAGCCCAAGGAGGACGCCGTGGTCAGCAACGGTTCTCCAGAGACAACTAAAAGGAAGGAGTCGGCCAAGGACTCCAGAGAGTCGCCGAAAGATCCGATCAAGATCGAGATCTCTGCGGAACCCGCGGACGGAGAACCGACCGAATCGAGGAAAAACGGCTACGTGTGTCCTTATTGCAGGCTGTCGTGCGCGAAACCGAGCGTCCTGCAAAAACACATCCGAGCTCACACCAACGAGAGGCCGTATCCTTGCGTTCCTTGCGGATTCGCGTTCAAGACCAAGTCGAATCTCTACAAACACTGCAGATCCCGTGCTCACGCCCTTAAGATGGAGGGTGGCGATGCCAGCAAGGTATCGGAGGACTCGGACATAAGCTTGTCCGACAGTGCGAGCAACGGAACCGGCACACCACCACCCCCTCCGTCATCGACGCCCACGACGACTTCAGTTAGTGtaaaaacgattaaaacgGGGAAAATCTACAAGCCAAAATTTCACACGGCCCTCCAGTGTGTCAACAACGATATCGAAACGTCTTCCCTTTCCTCCATTTCTTCCACGAACAGTTCTTCCTCGACAGCCGCTACCGCCATGCCGAAACCAAACCCAGAGCAAGTACAGGaacatattgataaaattattacggACAACCAAGCGATCGTCGATGCGGTAGATCCGCGACTGCACAAACTGATTCAAAGACAGCAAAGCCTTGTGGAAACGAAACAATCTAGCGATCAGCCGTTGAATCTCTCATCCGCGGAAGAAGCTTCGAGAAAACGATGTTACAGTGAGAGCTTTGTGCAAGAAAGTAAAGATTATCCGAACGGTTCGGAAAGTTCGATAATCAAGGATCTCCTGTTGAAAAATCAAAACTCGAGTCAAGAGGGAACGACGGAATACGAGAGCTATTTCTGCCCTTCCTGCAATATCCCTTACTCGAGTATCGATAATCTCGATGTTCATCGTAAGTACTACTGCAAAGGCAGCGTGAGTCCTCGAAGAGATTATCAGTTGGAAACGGAGAAAAGAGAGTCGGATTTTGATTCCAAGTCTTCCGAATATTACAACACCTTGCAACCCCTTCCCTCTCCCGGGCCTCTGTTGGGCAATACGAGGCTCGTCGACGCGTACGCTCCACCCATGAAGAAACAGAGATCGGACCCTGTACCAACCACGTTACGATCTCTCGAGGAGCTAAGCAAGTATCCACGACCAAACTCGTTGCAAATGTTCGGCGGGGAAGTCAGGATATTGGACAATACCGGTGAAACGAAGACGATGAGAATCGAGCCGCGACAAACCAACTCTCCTACGAGCGAGCAGATCGTCAGCAGCAAGTGCGTCACTTCGGAGACCGCTTCGATCGTGGTTAGATCGGGTCTTCACTCGGGAGGCACGATGGTACACAAACCACCGCGTACGGCGGTCAGCACGCCTAGTTCCTCCATATCTTTGCCCAACACTCCGAAAATGTTGGCGCCGATCATACCGAACATATCAACCTCGAATATAGCACCGAACATGTCGTGCTACAGTTATCTAGAGCCAAACTTAAATCCTCTGACCAGTATCACTGCCTATAACCCGCTGACTTTGCCTCAACCGGGAATCACGAATATCCTTCACGGTGGTAAAGTTATACCTTATGTTCCTGGTATGCCTGGACCACACACCCTGACGCCAGCCATAGACATATCCACGAGTTTAGCCACCGATGAAGCCGGATACAAGGTGATACCAGGATTGCCTGGCCTCCACATAGTCCCTCAACCCTTAGATCTCGCCAGTCCGGTGAAAATACAAACGCCAAGTACAAATACCAACGCCACCAAGATACAAACGCCAATAGCTGGAATTCCAGAGCCGATGTCCAATGGACACGTCTCGATGATAGGCCAGCCATTGGATCTCGCCAGCCCGGCAAAGGACCCCAAGCTCGGCTTCAAAACTCCTGGCAACGACGTTTTGAAGATCGGATTAACGAGCCCAAAAGTTCCTAGCGTTAACGAGACCTCGACGAGACTTCGCCTCAAGTTCTTGAGGCCGACTTCGTTGCCATTAAAGCCAGGCACGTTCACGCCCAAGAAGCATCATGGTATCACCCCTACGGCAAACACGCTTCCGCTCATAAGCCCAGAAACCCCTCGGCCGAAGAAATCCTACGGGCAGCTTTATTTGAACGGTCACGCGTATACATATCTTGGCCTGAAATGTTCGACCAGAGTATTTTACTGCACTCTGAATAGACCACAGCCGATGTATGTGACACAACAACACGGCTTATCTATGTACTCGAATTGGAAGATATGCAAAGAAGTACCATCTGACGTTGATATGGCGCATTATGATTCGAGGCACAGACCGCTTAATTATACGACCGCCTGGAAAAAACAGGAGGACATTTTGACGCATTCCTCGGAAAGACCGACCACCCCAACTAGTTCCGATAGCGGTTTGGATAGCGATATGCAAGAAAAAGCGAAAAGGGTTAAGATATTCGACGGGGGATTTGAAAGCAACGAGGACTATACATATGTCAGGGGTAGAGGTCGAGGCCGATACGTTTGCGAGGAATGCGGCATTCGTTGTAAAAAGCCATCCATGTTAAAGAAACATATCAGAACGCACACGGACGTAAGGCCGTACACGTGTAAACATTGCGCTTTTAGCTTTAAAACCAAAGGCAACCTGACGAAACATATGAAGTCGAAAGCTCATTACAAGAAGTGCGTCGAGCTCGGCGTTGTTCCGGTACCTACGACGGTCTGTgatgaaaatatcgataaagaaGCTATCGCCCGGTTGGCTGCAGGTGGAAATACCGAGGAATCCtcggaagaggaggaagaaagcGATGGAGAGGAGAGTGAAGAATCCGGAAGCGAGGAGCAAGAAGCTGCACAGAGTTTGCTAAGTCTATCGCAACGTAATACAAACAGATTTCCAGGGCTTCTACCGTCTGGAAGACCGACAACTTACCCTTACACTCTAACTTTCCCAACGACCTCCAGGTCCGCGAACGTATCATCTACCGCGATAAGCAACAACGTCTGCTTGAGCAGCCAAACTGTCACCACGCAAGAAACTACTCTCGTTCGAAACGAATTGTCCCATCGATACTATTTTCCCTCGAGCCGAACCGCTCCGGAAGAATCGAGGACGACCGTGATTCAATcatcgaaaaaagaaagttccGACATCGAGGTGAACGGAGTCGATACCGACTCGCGAAATACTTTGGCACAGCCTATGGATCTCACGACGAAACCAGCCCTTCAACCGTTGCCCTCTTCCATACCGCAAAGAGCCAAGCCAGCAGATATTTTAACTCCCGTTTCGGAACCGGTACTGTTACAAACGATCGTTCAAACGATGGAAAGACTACCGATACAAGGAAGAGAGTGGAAACCGGATGCCGAGGGGCATATGTTACAAGCATATCTCACTGAACGACACGTTATGgatagtaaaattaaacaacaatACCGAGTAGGAAACACGAAGATGGAAAAGCAACCGAGAGAGAGGGACATTTACCCGGAACAATCATCTCCGAAATCAAGAAACGCTGAATTAGAGACTAGTCCAGTAACGACTTATAACGATCCTAGCAAGATGCAAATGACTATGATAGATTCCAGGATTAAGCACGTATCGAAGCATACCACTGAAGATATCAAGATGGAAATCagagagaaaatttatcaGAACAATATCGTCATAGATCGACGGTCGTTCGATATCGAATCGATtcacagagaaaaagaaatagcagAGAGTATGAAACATACGGTTGCGCGGAAAATGGTTGTCGGTGGACCCGGTTTTAGATCGCCCTCGCCTAACGCTGCAACCACTAAACCACAAGCCGAGTTCTTGCAGCCCTCCAATGGACCTGCACCTAATTATGTCAGTTACAGTGTGACTGAAGATGGGAGAAGCGTCTGTGGAATTTGTAACAAGGTGTTCAGCAAACCTAGTCAGTTACGGTTGCATATCAACATTCATTACTTCGAGAGACCATTTAGATGCGAAAGTTGCGCGGTTTCTTTTCGAACCAAGGGTCATTTGACAAAGCACGAAAGATCTGTTTCTCATCACAATAAGGTTAGTATGACTTCCACGTTCGGAGCAGCGACCACCAGCAATCCAAGGCCATTTAAATGTACAGACTGCAAAATAGCATTCAGAATACATGGTCACTTGGCGAAGCATTTGCGTAGCAAAATGCACATTATGAAATTAGAATGTTTAGGAAAATTGCCCTTTGGAACGTACGCTGAGATGGAAAGATCTGGTGTCAATTTGAATGATATTGATACTACCGACTGTGATAATAGTCTTTCTAGTCTTCAGATGCTGGCTCAAAGACTTTGTGAAAAAGATCCTACAAAAATAGGTCAATGGGAGCCTGAAACAATTCCAAGTCAGGTGATCAGCGGTGGTGAGACTTCGTCCGATGAGGGTGAGCCTATTCTACAGCATGCGTGA
Protein Sequence
MTTETHTVAMTDPQLANNNNNNNTSNNNNNNNNNNNNNNDGEPKYLHKKFKKMATTEVTPQVEPKEDAVVSNGSPETTKRKESAKDSRESPKDPIKIEISAEPADGEPTESRKNGYVCPYCRLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRAHALKMEGGDASKVSEDSDISLSDSASNGTGTPPPPPSSTPTTTSVSVKTIKTGKIYKPKFHTALQCVNNDIETSSLSSISSTNSSSSTAATAMPKPNPEQVQEHIDKIITDNQAIVDAVDPRLHKLIQRQQSLVETKQSSDQPLNLSSAEEASRKRCYSESFVQESKDYPNGSESSIIKDLLLKNQNSSQEGTTEYESYFCPSCNIPYSSIDNLDVHRKYYCKGSVSPRRDYQLETEKRESDFDSKSSEYYNTLQPLPSPGPLLGNTRLVDAYAPPMKKQRSDPVPTTLRSLEELSKYPRPNSLQMFGGEVRILDNTGETKTMRIEPRQTNSPTSEQIVSSKCVTSETASIVVRSGLHSGGTMVHKPPRTAVSTPSSSISLPNTPKMLAPIIPNISTSNIAPNMSCYSYLEPNLNPLTSITAYNPLTLPQPGITNILHGGKVIPYVPGMPGPHTLTPAIDISTSLATDEAGYKVIPGLPGLHIVPQPLDLASPVKIQTPSTNTNATKIQTPIAGIPEPMSNGHVSMIGQPLDLASPAKDPKLGFKTPGNDVLKIGLTSPKVPSVNETSTRLRLKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEVPSDVDMAHYDSRHRPLNYTTAWKKQEDILTHSSERPTTPTSSDSGLDSDMQEKAKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCAFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTTVCDENIDKEAIARLAAGGNTEESSEEEEESDGEESEESGSEEQEAAQSLLSLSQRNTNRFPGLLPSGRPTTYPYTLTFPTTSRSANVSSTAISNNVCLSSQTVTTQETTLVRNELSHRYYFPSSRTAPEESRTTVIQSSKKESSDIEVNGVDTDSRNTLAQPMDLTTKPALQPLPSSIPQRAKPADILTPVSEPVLLQTIVQTMERLPIQGREWKPDAEGHMLQAYLTERHVMDSKIKQQYRVGNTKMEKQPRERDIYPEQSSPKSRNAELETSPVTTYNDPSKMQMTMIDSRIKHVSKHTTEDIKMEIREKIYQNNIVIDRRSFDIESIHREKEIAESMKHTVARKMVVGGPGFRSPSPNAATTKPQAEFLQPSNGPAPNYVSYSVTEDGRSVCGICNKVFSKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLSSLQMLAQRLCEKDPTKIGQWEPETIPSQVISGGETSSDEGEPILQHA